RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 HARSP12081 509 aaKnown RBP18.02■□□□□ 0.48
COL18A1-203ENST00000359759 INF2Q27J81 1249 aa18.02■□□□□ 0.48
COL18A1-203ENST00000359759 SPDYE3A6NKU9 549 aa18.02■□□□□ 0.48
COL18A1-203ENST00000359759 RFC1P35251 1148 aaPredicted RBP18.02■□□□□ 0.48
COL18A1-203ENST00000359759 PPP2R5DQ14738 602 aa18.02■□□□□ 0.48
COL18A1-203ENST00000359759 FYB2Q5VWT5 728 aa18.02■□□□□ 0.48
COL18A1-203ENST00000359759 ARFGAP2Q8N6H7 521 aa18.02■□□□□ 0.48
COL18A1-203ENST00000359759 VPS16Q9H269 839 aa18.02■□□□□ 0.48
COL18A1-203ENST00000359759 CCDC110Q8TBZ0 833 aa18.02■□□□□ 0.48
COL18A1-203ENST00000359759 KIAA1524Q8TCG1 905 aa18.02■□□□□ 0.48
COL18A1-203ENST00000359759 DHX29Q7Z478 1369 aaKnown RBP18.02■□□□□ 0.47
COL18A1-203ENST00000359759 CACNA2D3Q8IZS8 1091 aa18.02■□□□□ 0.47
COL18A1-203ENST00000359759 ST5P78524 1137 aa18.01■□□□□ 0.47
COL18A1-203ENST00000359759 ZNF174Q15697 407 aa18.01■□□□□ 0.47
COL18A1-203ENST00000359759 CCDC26Q8TAB7 109 aa18.01■□□□□ 0.47
COL18A1-203ENST00000359759 PTPDC1A2A3K4 754 aa18.01■□□□□ 0.47
COL18A1-203ENST00000359759 PAG1Q9NWQ8 432 aa18.01■□□□□ 0.47
COL18A1-203ENST00000359759 TXNDC9O14530 226 aa18.01■□□□□ 0.47
COL18A1-203ENST00000359759 NBPF6Q5VWK0 638 aa18.01■□□□□ 0.47
COL18A1-203ENST00000359759 ANKRD13DQ6ZTN6 518 aa18.01■□□□□ 0.47
COL18A1-203ENST00000359759 NBPF5PQ86XG9 351 aaPredicted RBP18.01■□□□□ 0.47
COL18A1-203ENST00000359759 C17orf53Q8N3J3 647 aaPredicted RBP18.01■□□□□ 0.47
COL18A1-203ENST00000359759 GBP7Q8N8V2 638 aaPredicted RBP18.01■□□□□ 0.47
COL18A1-203ENST00000359759 NBPF4Q96M43 638 aa18.01■□□□□ 0.47
COL18A1-203ENST00000359759 PCDHB15Q9Y5E8 787 aa18.01■□□□□ 0.47
COL18A1-203ENST00000359759 VWA3AA6NCI4 1184 aa18.01■□□□□ 0.47
COL18A1-203ENST00000359759 MAGEB6Q8N7X4 407 aa18.01■□□□□ 0.47
COL18A1-203ENST00000359759 JAG2Q9Y219 1238 aa18.01■□□□□ 0.47
COL18A1-203ENST00000359759 EXOC5O00471 708 aa18.01■□□□□ 0.47
COL18A1-203ENST00000359759 LMNTD2Q8IXW0 634 aa18.01■□□□□ 0.47
COL18A1-203ENST00000359759 DTHD1Q6ZMT9 781 aa18.01■□□□□ 0.47
COL18A1-203ENST00000359759 PLEKHA4Q9H4M7 779 aa18.01■□□□□ 0.47
COL18A1-203ENST00000359759 NDUFAB1O14561 156 aa18■□□□□ 0.47
COL18A1-203ENST00000359759 CASQ2O14958 399 aaPredicted RBP18■□□□□ 0.47
COL18A1-203ENST00000359759 JAKMIP2Q96AA8 810 aa18■□□□□ 0.47
COL18A1-203ENST00000359759 IFT74Q96LB3 600 aa18■□□□□ 0.47
COL18A1-203ENST00000359759 NOC4LQ9BVI4 516 aaKnown RBP18■□□□□ 0.47
COL18A1-203ENST00000359759 MAPK8IP1Q9UQF2 711 aa18■□□□□ 0.47
COL18A1-203ENST00000359759 SPOPO43791 374 aa18■□□□□ 0.47
COL18A1-203ENST00000359759 KIFC2Q96AC6 838 aa18■□□□□ 0.47
COL18A1-203ENST00000359759 HAUS7Q99871 368 aa18■□□□□ 0.47
COL18A1-203ENST00000359759 UTP11Q9Y3A2 253 aaKnown RBP18■□□□□ 0.47
COL18A1-203ENST00000359759 CLUL1Q15846 466 aa18■□□□□ 0.47
COL18A1-203ENST00000359759 WWC3Q9ULE0 1092 aa18■□□□□ 0.47
COL18A1-203ENST00000359759 B4GALNT4Q76KP1 1039 aa17.99■□□□□ 0.47
COL18A1-203ENST00000359759 ATP5DP30049 168 aa17.99■□□□□ 0.47
COL18A1-203ENST00000359759 C8orf74Q6P047 294 aa17.99■□□□□ 0.47
COL18A1-203ENST00000359759 HS2ST1Q7LGA3 356 aa17.99■□□□□ 0.47
COL18A1-203ENST00000359759 ANKRD24Q8TF21 1146 aa17.99■□□□□ 0.47
COL18A1-203ENST00000359759 INPP5BP32019 993 aa17.99■□□□□ 0.47
COL18A1-203ENST00000359759 CREB3L3Q68CJ9 461 aa17.99■□□□□ 0.47
COL18A1-203ENST00000359759 NAPGQ99747 312 aaPredicted RBP17.99■□□□□ 0.47
COL18A1-203ENST00000359759 RTL9Q8NET4 1388 aa17.99■□□□□ 0.47
COL18A1-203ENST00000359759 GOLGA6CA6NDK9 693 aa17.99■□□□□ 0.47
COL18A1-203ENST00000359759 VGLL3A8MV65 326 aa17.99■□□□□ 0.47
COL18A1-203ENST00000359759 GAS8O95995 478 aa17.99■□□□□ 0.47
COL18A1-203ENST00000359759 TUBB4AP04350 444 aa17.99■□□□□ 0.47
COL18A1-203ENST00000359759 GOLGA6DP0CG33 693 aa17.99■□□□□ 0.47
COL18A1-203ENST00000359759 RAB3GAP1Q15042 981 aa17.99■□□□□ 0.47
COL18A1-203ENST00000359759 XAGE3Q8WTP9 111 aa17.99■□□□□ 0.47
COL18A1-203ENST00000359759 GOLGA6AQ9NYA3 693 aa17.99■□□□□ 0.47
COL18A1-203ENST00000359759 SNAPC4Q5SXM2 1469 aa17.99■□□□□ 0.47
COL18A1-203ENST00000359759 CLSTN2Q9H4D0 955 aa17.99■□□□□ 0.47
COL18A1-203ENST00000359759 SDCCAG8Q86SQ7 713 aaPredicted RBP17.98■□□□□ 0.47
COL18A1-203ENST00000359759 VCX3BQ9H321 246 aa17.98■□□□□ 0.47
COL18A1-203ENST00000359759 RIOK3O14730 519 aaKnown RBP17.98■□□□□ 0.47
COL18A1-203ENST00000359759 HDAC1Q13547 482 aaPredicted RBP17.98■□□□□ 0.47
COL18A1-203ENST00000359759 ELF2Q15723 593 aa17.98■□□□□ 0.47
COL18A1-203ENST00000359759 PSMB7Q99436 277 aa17.98■□□□□ 0.47
COL18A1-203ENST00000359759 FAM204AQ9H8W3 233 aa17.98■□□□□ 0.47
COL18A1-203ENST00000359759 GNAQP50148 359 aa17.98■□□□□ 0.47
COL18A1-203ENST00000359759 IFNL2Q8IZJ0 200 aa17.98■□□□□ 0.47
COL18A1-203ENST00000359759 GPR161Q8N6U8 529 aaKnown RBP17.98■□□□□ 0.47
COL18A1-203ENST00000359759 HECW1Q76N89 1606 aa17.98■□□□□ 0.47
COL18A1-203ENST00000359759 SNRPA1P09661 255 aaKnown RBP17.98■□□□□ 0.47
COL18A1-203ENST00000359759 CNGA4Q8IV77 575 aa17.98■□□□□ 0.47
COL18A1-203ENST00000359759 IGSF22Q8N9C0 903 aa17.98■□□□□ 0.47
COL18A1-203ENST00000359759 MSANTD4Q8NCY6 345 aa17.98■□□□□ 0.47
COL18A1-203ENST00000359759 CARD6Q9BX69 1037 aa17.98■□□□□ 0.47
COL18A1-203ENST00000359759 TACC3Q9Y6A5 838 aa17.98■□□□□ 0.47
COL18A1-203ENST00000359759 A0A1B0GUA9 196 aa17.97■□□□□ 0.47
COL18A1-203ENST00000359759 CPA1P15085 419 aa17.97■□□□□ 0.47
COL18A1-203ENST00000359759 RUFY3Q7L099 469 aa17.97■□□□□ 0.47
COL18A1-203ENST00000359759 ACSBG1Q96GR2 724 aa17.97■□□□□ 0.47
COL18A1-203ENST00000359759 SWAP70Q9UH65 585 aa17.97■□□□□ 0.47
COL18A1-203ENST00000359759 VEZTQ9HBM0 779 aa17.97■□□□□ 0.47
COL18A1-203ENST00000359759 FRMD4BQ9Y2L6 1034 aa17.97■□□□□ 0.47
COL18A1-203ENST00000359759 TRAF5O00463 557 aa17.97■□□□□ 0.47
COL18A1-203ENST00000359759 TAF12Q16514 161 aa17.97■□□□□ 0.47
COL18A1-203ENST00000359759 MCUR1Q96AQ8 359 aa17.97■□□□□ 0.47
COL18A1-203ENST00000359759 TNFAIP3P21580 790 aa17.97■□□□□ 0.47
COL18A1-203ENST00000359759 NCBP1Q09161 790 aaKnown RBP17.97■□□□□ 0.47
COL18A1-203ENST00000359759 SLC39A6Q13433 755 aa17.97■□□□□ 0.47
COL18A1-203ENST00000359759 CHMP2AO43633 222 aa17.97■□□□□ 0.47
COL18A1-203ENST00000359759 ITIH3Q06033 890 aa17.97■□□□□ 0.47
COL18A1-203ENST00000359759 C8orf34Q49A92 452 aa17.97■□□□□ 0.47
COL18A1-203ENST00000359759 PHF8Q9UPP1 1060 aa17.97■□□□□ 0.47
COL18A1-203ENST00000359759 LMBR1LQ6UX01 489 aa17.96■□□□□ 0.47
COL18A1-203ENST00000359759 NGLY1Q96IV0 654 aa17.96■□□□□ 0.47
COL18A1-203ENST00000359759 FAM184BQ9ULE4 1060 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms