RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 CACTINQ8WUQ7 758 aaKnown RBP6.83□□□□□ -1.32
VPS13B-203ENST00000358544 LARSQ9P2J5 1176 aaKnown RBP6.83□□□□□ -1.32
VPS13B-203ENST00000358544 MYH6P13533 1939 aa6.83□□□□□ -1.32
VPS13B-203ENST00000358544 POLR3AO14802 1390 aaPredicted RBP6.82□□□□□ -1.32
VPS13B-203ENST00000358544 NBPF14Q5TI25 921 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 ACTR5Q9H9F9 607 aaPredicted RBP6.82□□□□□ -1.32
VPS13B-203ENST00000358544 PLCE1Q9P212 2302 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 STRN4Q9NRL3 753 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 RNF40O75150 1001 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 RNF10Q8N5U6 811 aaKnown RBP6.82□□□□□ -1.32
VPS13B-203ENST00000358544 CCDC197Q8NCU1 140 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 NRBP1Q9UHY1 535 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 PTPRGP23470 1445 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 LONRF2Q1L5Z9 754 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 FBXO18Q8NFZ0 1043 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 BCAS4Q8TDM0 211 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 AIDAQ96BJ3 306 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 PEG3Q9GZU2 1588 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 ANO1Q5XXA6 986 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 APBA1Q02410 837 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 PPP1R7Q15435 360 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 RAB3IL1Q8TBN0 382 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 RAB3IPQ96QF0 476 aaPredicted RBP6.82□□□□□ -1.32
VPS13B-203ENST00000358544 STK38LQ9Y2H1 464 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 CCDC194A0A1B0GVG4 234 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 PSDA5PKW4 1024 aaPredicted RBP6.82□□□□□ -1.32
VPS13B-203ENST00000358544 MICU3Q86XE3 530 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 SYTL4Q96C24 671 aaPredicted RBP6.82□□□□□ -1.32
VPS13B-203ENST00000358544 CEP126Q9P2H0 1117 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 ASXL1Q8IXJ9 1541 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 CCDC170Q8IYT3 715 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 TSKSQ9UJT2 592 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 STX17P56962 302 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 SESN3P58005 492 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 C16orf71Q8IYS4 520 aaPredicted RBP6.82□□□□□ -1.32
VPS13B-203ENST00000358544 CEP120Q8N960 986 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 FKBP4Q02790 459 aaKnown RBP eCLIP6.82□□□□□ -1.32
VPS13B-203ENST00000358544 RUFY3Q7L099 469 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 CWC25Q9NXE8 425 aaPredicted RBP6.82□□□□□ -1.32
VPS13B-203ENST00000358544 WWC3Q9ULE0 1092 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 FAF1Q9UNN5 650 aaPredicted RBP6.82□□□□□ -1.32
VPS13B-203ENST00000358544 CETN3O15182 167 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 NMIQ13287 307 aaPredicted RBP6.82□□□□□ -1.32
VPS13B-203ENST00000358544 KRT71Q3SY84 523 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 CROCCP2Q86T23 111 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 SLF1Q9BQI6 1058 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 YY1AP1Q9H869 796 aa6.82□□□□□ -1.32
VPS13B-203ENST00000358544 KLF18A0A0U1RQI7 1052 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 ABTB1Q969K4 478 aaPredicted RBP6.81□□□□□ -1.32
VPS13B-203ENST00000358544 DHX58Q96C10 678 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 SCAF11Q99590 1463 aaKnown RBP6.81□□□□□ -1.32
VPS13B-203ENST00000358544 TLDC2A0PJX2 215 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 CDC37L1Q7L3B6 337 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 RHPN1Q8TCX5 695 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 PIK3R5Q8WYR1 880 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 PRAM1Q96QH2 718 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 CCDC88CQ9P219 2028 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 METAP2P50579 478 aaKnown RBP eCLIP6.81□□□□□ -1.32
VPS13B-203ENST00000358544 ATP1A2P50993 1020 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 ARHGAP24Q8N264 748 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 TRIM66O15016 1216 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 PHLDB2Q86SQ0 1253 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 FCHSD1Q86WN1 690 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 CHAMP1Q96JM3 812 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 SETD1BQ9UPS6 1966 aaKnown RBP6.81□□□□□ -1.32
VPS13B-203ENST00000358544 MYCNP04198 464 aaPredicted RBP6.81□□□□□ -1.32
VPS13B-203ENST00000358544 CPA1P15085 419 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 NBPF6Q5VWK0 638 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 NBPF5PQ86XG9 351 aaPredicted RBP6.81□□□□□ -1.32
VPS13B-203ENST00000358544 NBPF4Q96M43 638 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 CDK19Q9BWU1 502 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 UBA5Q9GZZ9 404 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 NFE2L3Q9Y4A8 694 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 GUCY2CP25092 1073 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 FLIIQ13045 1269 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 BICDL2A1A5D9 508 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 TRIM75PA6NK02 468 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 FYB2Q5VWT5 728 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 NCOA7Q8NI08 942 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.81□□□□□ -1.32
VPS13B-203ENST00000358544 SAMM50Q9Y512 469 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 NLRP2Q9NX02 1062 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 CDC23Q9UJX2 597 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 PIK3R4Q99570 1358 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 ZNF131P52739 623 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 SPAG5Q96R06 1193 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 NUCKS1Q9H1E3 243 aaKnown RBP6.81□□□□□ -1.32
VPS13B-203ENST00000358544 SSH2Q76I76 1423 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 CCDC26Q8TAB7 109 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 CCDC51Q96ER9 411 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 CREBBPQ92793 2442 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 PTPDC1A2A3K4 754 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 HAND2P61296 217 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 DTNBP1Q96EV8 351 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 PARD6BQ9BYG5 372 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 CACNA1IQ9P0X4 2223 aa6.81□□□□□ -1.32
VPS13B-203ENST00000358544 CAPRIN2Q6IMN6 1127 aaKnown RBP6.8□□□□□ -1.32
VPS13B-203ENST00000358544 CCDC8Q9H0W5 538 aaPredicted RBP6.8□□□□□ -1.32
VPS13B-203ENST00000358544 TAB2Q9NYJ8 693 aa6.8□□□□□ -1.32
VPS13B-203ENST00000358544 FLOT1O75955 427 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms