RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 TULP2O00295 520 aa27.37■■□□□ 1.97
NPAS3-203ENST00000357798 SLC39A14Q15043 492 aa27.37■■□□□ 1.97
NPAS3-203ENST00000357798 MPHOSPH8Q99549 860 aa27.37■■□□□ 1.97
NPAS3-203ENST00000357798 C4AP0C0L4 1744 aa27.37■■□□□ 1.97
NPAS3-203ENST00000357798 C4BP0C0L5 1744 aa27.37■■□□□ 1.97
NPAS3-203ENST00000357798 KIF28PB7ZC32 967 aa27.37■■□□□ 1.97
NPAS3-203ENST00000357798 M0R2C6 588 aa27.37■■□□□ 1.97
NPAS3-203ENST00000357798 GTF2E1P29083 439 aaPredicted RBP27.37■■□□□ 1.97
NPAS3-203ENST00000357798 TTLL5Q6EMB2 1281 aa27.37■■□□□ 1.97
NPAS3-203ENST00000357798 BBXQ8WY36 941 aaPredicted RBP27.37■■□□□ 1.97
NPAS3-203ENST00000357798 CARD6Q9BX69 1037 aa27.37■■□□□ 1.97
NPAS3-203ENST00000357798 GPHNQ9NQX3 736 aaPredicted RBP27.37■■□□□ 1.97
NPAS3-203ENST00000357798 HPS5Q9UPZ3 1129 aa27.37■■□□□ 1.97
NPAS3-203ENST00000357798 SERPINC1P01008 464 aa27.36■■□□□ 1.97
NPAS3-203ENST00000357798 DPF2Q92785 391 aa27.36■■□□□ 1.97
NPAS3-203ENST00000357798 HPSEQ9Y251 543 aa27.36■■□□□ 1.97
NPAS3-203ENST00000357798 KLF18A0A0U1RQI7 1052 aa27.36■■□□□ 1.97
NPAS3-203ENST00000357798 GOLGA8BA8MQT2 603 aa27.36■■□□□ 1.97
NPAS3-203ENST00000357798 FANCGO15287 622 aa27.36■■□□□ 1.97
NPAS3-203ENST00000357798 SYKP43405 635 aa27.36■■□□□ 1.97
NPAS3-203ENST00000357798 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.35■■□□□ 1.97
NPAS3-203ENST00000357798 ZNF496Q96IT1 587 aaPredicted RBP27.35■■□□□ 1.97
NPAS3-203ENST00000357798 KIF1AQ12756 1690 aa27.35■■□□□ 1.97
NPAS3-203ENST00000357798 ARHGAP6O43182 974 aa27.35■■□□□ 1.97
NPAS3-203ENST00000357798 WDHD1O75717 1129 aaPredicted RBP27.35■■□□□ 1.97
NPAS3-203ENST00000357798 SNRPA1P09661 255 aaKnown RBP27.35■■□□□ 1.97
NPAS3-203ENST00000357798 IFIT1P09914 478 aaKnown RBP27.35■■□□□ 1.97
NPAS3-203ENST00000357798 UTP14AQ9BVJ6 771 aaKnown RBP27.35■■□□□ 1.97
NPAS3-203ENST00000357798 FAM237AA0A1B0GTK4 181 aa27.34■■□□□ 1.97
NPAS3-203ENST00000357798 GOLGA6L9A6NEM1 432 aa27.34■■□□□ 1.97
NPAS3-203ENST00000357798 PRC1O43663 620 aa27.34■■□□□ 1.97
NPAS3-203ENST00000357798 IL15P40933 162 aaPredicted RBP27.34■■□□□ 1.97
NPAS3-203ENST00000357798 FOXO4P98177 505 aa27.34■■□□□ 1.97
NPAS3-203ENST00000357798 CFAP100Q494V2 611 aa27.34■■□□□ 1.97
NPAS3-203ENST00000357798 ATP5J2-PTCD1G3V325 749 aa27.34■■□□□ 1.97
NPAS3-203ENST00000357798 PTCD1O75127 700 aaKnown RBP27.34■■□□□ 1.97
NPAS3-203ENST00000357798 TOP1P11387 765 aaKnown RBP27.34■■□□□ 1.97
NPAS3-203ENST00000357798 IMMTQ16891 758 aaKnown RBP27.34■■□□□ 1.97
NPAS3-203ENST00000357798 MB21D2Q8IYB1 491 aaPredicted RBP27.34■■□□□ 1.97
NPAS3-203ENST00000357798 ESCO1Q5FWF5 840 aa27.33■■□□□ 1.97
NPAS3-203ENST00000357798 VWA3AA6NCI4 1184 aa27.33■■□□□ 1.97
NPAS3-203ENST00000357798 CPLX1O14810 134 aa27.33■■□□□ 1.97
NPAS3-203ENST00000357798 PPP6R2O75170 966 aa27.33■■□□□ 1.97
NPAS3-203ENST00000357798 TIMM10P62072 90 aa27.33■■□□□ 1.97
NPAS3-203ENST00000357798 SLC20A2Q08357 652 aa27.33■■□□□ 1.97
NPAS3-203ENST00000357798 TMEM139Q8IV31 216 aa27.33■■□□□ 1.97
NPAS3-203ENST00000357798 PPP2R2CQ9Y2T4 447 aa27.33■■□□□ 1.97
NPAS3-203ENST00000357798 WDR19Q8NEZ3 1342 aa27.33■■□□□ 1.97
NPAS3-203ENST00000357798 JMYQ8N9B5 988 aa27.32■■□□□ 1.96
NPAS3-203ENST00000357798 HNRNPH2P55795 449 aaKnown RBP27.32■■□□□ 1.96
NPAS3-203ENST00000357798 ISM2Q6H9L7 571 aa27.32■■□□□ 1.96
NPAS3-203ENST00000357798 GPR161Q8N6U8 529 aaKnown RBP27.32■■□□□ 1.96
NPAS3-203ENST00000357798 PLBD2Q8NHP8 589 aa27.32■■□□□ 1.96
NPAS3-203ENST00000357798 OSBP2Q969R2 916 aa27.32■■□□□ 1.96
NPAS3-203ENST00000357798 ZBTB22O15209 634 aa27.31■■□□□ 1.96
NPAS3-203ENST00000357798 OLFM4Q6UX06 510 aa27.31■■□□□ 1.96
NPAS3-203ENST00000357798 TXLNBQ8N3L3 684 aa27.31■■□□□ 1.96
NPAS3-203ENST00000357798 RGPD5Q99666 1765 aa27.31■■□□□ 1.96
NPAS3-203ENST00000357798 NFATC2IPQ8NCF5 419 aa27.31■■□□□ 1.96
NPAS3-203ENST00000357798 H7C1W4 665 aa27.31■■□□□ 1.96
NPAS3-203ENST00000357798 LAMB4A4D0S4 1761 aa27.3■■□□□ 1.96
NPAS3-203ENST00000357798 TBC1D8O95759 1140 aa27.3■■□□□ 1.96
NPAS3-203ENST00000357798 MARCKSP29966 332 aaPredicted RBP27.3■■□□□ 1.96
NPAS3-203ENST00000357798 CC2D1AQ6P1N0 951 aaPredicted RBP27.3■■□□□ 1.96
NPAS3-203ENST00000357798 SEC31AO94979 1220 aaKnown RBP27.3■■□□□ 1.96
NPAS3-203ENST00000357798 MAP3K9P80192 1104 aa27.3■■□□□ 1.96
NPAS3-203ENST00000357798 GJB4Q9NTQ9 266 aa27.3■■□□□ 1.96
NPAS3-203ENST00000357798 FOXP2O15409 715 aa27.29■■□□□ 1.96
NPAS3-203ENST00000357798 CDK11BP21127 795 aaKnown RBP27.29■■□□□ 1.96
NPAS3-203ENST00000357798 CASQ1P31415 396 aa27.29■■□□□ 1.96
NPAS3-203ENST00000357798 AXIN2Q9Y2T1 843 aa27.29■■□□□ 1.96
NPAS3-203ENST00000357798 ANTXR2P58335 489 aa27.29■■□□□ 1.96
NPAS3-203ENST00000357798 TBX2Q13207 712 aaPredicted RBP27.29■■□□□ 1.96
NPAS3-203ENST00000357798 SHC4Q6S5L8 630 aa27.29■■□□□ 1.96
NPAS3-203ENST00000357798 NCOA7Q8NI08 942 aa27.29■■□□□ 1.96
NPAS3-203ENST00000357798 TSPYL1Q9H0U9 437 aa27.29■■□□□ 1.96
NPAS3-203ENST00000357798 TMEM232C9JQI7 657 aa27.28■■□□□ 1.96
NPAS3-203ENST00000357798 ZFYP08048 801 aaPredicted RBP27.28■■□□□ 1.96
NPAS3-203ENST00000357798 PHKG2P15735 406 aa27.28■■□□□ 1.96
NPAS3-203ENST00000357798 CPDO75976 1380 aa27.28■■□□□ 1.96
NPAS3-203ENST00000357798 POLR3GO15318 223 aaPredicted RBP27.28■■□□□ 1.96
NPAS3-203ENST00000357798 PIP4K2AP48426 406 aaPredicted RBP27.28■■□□□ 1.96
NPAS3-203ENST00000357798 RESP18Q5W5W9 173 aa27.28■■□□□ 1.96
NPAS3-203ENST00000357798 C19orf44Q9H6X5 657 aa27.28■■□□□ 1.96
NPAS3-203ENST00000357798 EYA2O00167 538 aa27.27■■□□□ 1.96
NPAS3-203ENST00000357798 HAND2P61296 217 aa27.27■■□□□ 1.96
NPAS3-203ENST00000357798 PNOCQ13519 176 aa27.27■■□□□ 1.96
NPAS3-203ENST00000357798 PTPAQ15257 358 aa27.27■■□□□ 1.96
NPAS3-203ENST00000357798 RSRC2Q7L4I2 434 aaKnown RBP27.27■■□□□ 1.96
NPAS3-203ENST00000357798 TTC5Q8N0Z6 440 aa27.27■■□□□ 1.96
NPAS3-203ENST00000357798 MRFAP1Q9Y605 127 aa27.27■■□□□ 1.96
NPAS3-203ENST00000357798 TJP1Q07157 1748 aa27.27■■□□□ 1.96
NPAS3-203ENST00000357798 RAPGEF4Q8WZA2 1011 aa27.27■■□□□ 1.96
NPAS3-203ENST00000357798 FANCLQ9NW38 375 aa27.27■■□□□ 1.96
NPAS3-203ENST00000357798 FER1L4A9Z1Z3 1794 aa27.27■■□□□ 1.96
NPAS3-203ENST00000357798 A0A1B0GUL7 405 aa27.26■■□□□ 1.96
NPAS3-203ENST00000357798 SASH3O75995 380 aa27.26■■□□□ 1.96
NPAS3-203ENST00000357798 CIAO1O76071 339 aa27.26■■□□□ 1.96
NPAS3-203ENST00000357798 MUM1L1Q5H9M0 696 aa27.26■■□□□ 1.96
NPAS3-203ENST00000357798 RALYLQ86SE5 291 aaKnown RBP27.26■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms