RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 SF3A1Q15459 793 aaKnown RBP17.77■□□□□ 0.44
PTBP1-203ENST00000356948 IMMTQ16891 758 aaKnown RBP17.77■□□□□ 0.44
PTBP1-203ENST00000356948 STK38Q15208 465 aa17.77■□□□□ 0.43
PTBP1-203ENST00000356948 CADPS2Q86UW7 1296 aa17.77■□□□□ 0.43
PTBP1-203ENST00000356948 ZKSCAN3Q9BRR0 538 aa17.77■□□□□ 0.43
PTBP1-203ENST00000356948 STX1AQ16623 288 aa17.76■□□□□ 0.43
PTBP1-203ENST00000356948 GPR108Q9NPR9 543 aa17.76■□□□□ 0.43
PTBP1-203ENST00000356948 MYO5AQ9Y4I1 1855 aaKnown RBP17.76■□□□□ 0.43
PTBP1-203ENST00000356948 ZNF213O14771 459 aa17.76■□□□□ 0.43
PTBP1-203ENST00000356948 TMOD3Q9NYL9 352 aa17.76■□□□□ 0.43
PTBP1-203ENST00000356948 SKILP12757 684 aa17.76■□□□□ 0.43
PTBP1-203ENST00000356948 FBXO18Q8NFZ0 1043 aa17.76■□□□□ 0.43
PTBP1-203ENST00000356948 TTLL11Q8NHH1 800 aa17.76■□□□□ 0.43
PTBP1-203ENST00000356948 RFX7Q2KHR2 1363 aa17.76■□□□□ 0.43
PTBP1-203ENST00000356948 CCDC69A6NI79 296 aa17.75■□□□□ 0.43
PTBP1-203ENST00000356948 ERVV-2B6SEH9 535 aa17.75■□□□□ 0.43
PTBP1-203ENST00000356948 ATP1A3P13637 1013 aa17.75■□□□□ 0.43
PTBP1-203ENST00000356948 CTDSPL2Q05D32 466 aa17.75■□□□□ 0.43
PTBP1-203ENST00000356948 MRPS27Q92552 414 aaKnown RBP17.75■□□□□ 0.43
PTBP1-203ENST00000356948 ATG3Q9NT62 314 aa17.75■□□□□ 0.43
PTBP1-203ENST00000356948 RIPOR2Q9Y4F9 1068 aa17.75■□□□□ 0.43
PTBP1-203ENST00000356948 CPLX1O14810 134 aa17.75■□□□□ 0.43
PTBP1-203ENST00000356948 CNNM1Q9NRU3 951 aa17.75■□□□□ 0.43
PTBP1-203ENST00000356948 IQSEC3Q9UPP2 1182 aaPredicted RBP17.75■□□□□ 0.43
PTBP1-203ENST00000356948 CIAO1O76071 339 aa17.75■□□□□ 0.43
PTBP1-203ENST00000356948 NCBP1Q09161 790 aaKnown RBP17.75■□□□□ 0.43
PTBP1-203ENST00000356948 MYSM1Q5VVJ2 828 aa17.75■□□□□ 0.43
PTBP1-203ENST00000356948 ZBTB1Q9Y2K1 713 aa17.75■□□□□ 0.43
PTBP1-203ENST00000356948 PRKAB2O43741 272 aa17.74■□□□□ 0.43
PTBP1-203ENST00000356948 APPBP2Q92624 585 aa17.74■□□□□ 0.43
PTBP1-203ENST00000356948 NUP188Q5SRE5 1749 aa17.74■□□□□ 0.43
PTBP1-203ENST00000356948 FOXN1O15353 648 aa17.74■□□□□ 0.43
PTBP1-203ENST00000356948 DMTNQ08495 405 aa17.74■□□□□ 0.43
PTBP1-203ENST00000356948 ZNF396Q96N95 335 aaPredicted RBP17.74■□□□□ 0.43
PTBP1-203ENST00000356948 RIC1Q4ADV7 1423 aa17.74■□□□□ 0.43
PTBP1-203ENST00000356948 LMOD1P29536 600 aaPredicted RBP17.74■□□□□ 0.43
PTBP1-203ENST00000356948 GUCY1A2P33402 732 aa17.74■□□□□ 0.43
PTBP1-203ENST00000356948 CCZ1BP86790 482 aa17.74■□□□□ 0.43
PTBP1-203ENST00000356948 CCZ1P86791 482 aaPredicted RBP17.74■□□□□ 0.43
PTBP1-203ENST00000356948 RALYLQ86SE5 291 aaKnown RBP17.74■□□□□ 0.43
PTBP1-203ENST00000356948 RTEL1Q9NZ71 1219 aa17.74■□□□□ 0.43
PTBP1-203ENST00000356948 ZNF532Q9HCE3 1301 aa17.74■□□□□ 0.43
PTBP1-203ENST00000356948 KIF1AQ12756 1690 aa17.74■□□□□ 0.43
PTBP1-203ENST00000356948 PKD1L3Q7Z443 1732 aa17.74■□□□□ 0.43
PTBP1-203ENST00000356948 SPTLC2O15270 562 aa17.73■□□□□ 0.43
PTBP1-203ENST00000356948 XPO4Q9C0E2 1151 aaKnown RBP17.73■□□□□ 0.43
PTBP1-203ENST00000356948 ZNF202O95125 648 aa17.73■□□□□ 0.43
PTBP1-203ENST00000356948 AXDND1Q5T1B0 1012 aaPredicted RBP17.73■□□□□ 0.43
PTBP1-203ENST00000356948 ADALQ6DHV7 355 aa17.73■□□□□ 0.43
PTBP1-203ENST00000356948 NLRP10Q86W26 655 aa17.73■□□□□ 0.43
PTBP1-203ENST00000356948 LRRN4CLQ8ND94 238 aa17.73■□□□□ 0.43
PTBP1-203ENST00000356948 IFNKQ9P0W0 207 aa17.73■□□□□ 0.43
PTBP1-203ENST00000356948 KIF23Q02241 960 aaPredicted RBP17.73■□□□□ 0.43
PTBP1-203ENST00000356948 GRIN1Q05586 938 aa17.73■□□□□ 0.43
PTBP1-203ENST00000356948 ZBTB38Q8NAP3 1195 aaPredicted RBP17.73■□□□□ 0.43
PTBP1-203ENST00000356948 NCOA7Q8NI08 942 aa17.73■□□□□ 0.43
PTBP1-203ENST00000356948 COL5A2P05997 1499 aaPredicted RBP17.72■□□□□ 0.43
PTBP1-203ENST00000356948 RANBP6O60518 1105 aaKnown RBP17.72■□□□□ 0.43
PTBP1-203ENST00000356948 SMC2O95347 1197 aa17.72■□□□□ 0.43
PTBP1-203ENST00000356948 PFKFB1P16118 471 aa17.72■□□□□ 0.43
PTBP1-203ENST00000356948 LMTK3Q96Q04 1460 aa17.72■□□□□ 0.43
PTBP1-203ENST00000356948 CSF1RP07333 972 aa17.72■□□□□ 0.43
PTBP1-203ENST00000356948 DPF2Q92785 391 aa17.72■□□□□ 0.43
PTBP1-203ENST00000356948 SEC31BQ9NQW1 1179 aa17.72■□□□□ 0.43
PTBP1-203ENST00000356948 KIAA1468Q9P260 1216 aa17.72■□□□□ 0.43
PTBP1-203ENST00000356948 TRMT112Q9UI30 125 aaKnown RBP17.72■□□□□ 0.43
PTBP1-203ENST00000356948 PDIA4P13667 645 aaKnown RBP17.71■□□□□ 0.43
PTBP1-203ENST00000356948 ZSCAN20P17040 1043 aaPredicted RBP17.71■□□□□ 0.43
PTBP1-203ENST00000356948 SMIM5Q71RC9 77 aa17.71■□□□□ 0.43
PTBP1-203ENST00000356948 IRS4O14654 1257 aaPredicted RBP17.71■□□□□ 0.43
PTBP1-203ENST00000356948 PNOCQ13519 176 aa17.71■□□□□ 0.43
PTBP1-203ENST00000356948 CCDC102BQ68D86 513 aa17.71■□□□□ 0.43
PTBP1-203ENST00000356948 PCCAP05165 728 aaPredicted RBP17.71■□□□□ 0.43
PTBP1-203ENST00000356948 ADD2P35612 726 aa17.71■□□□□ 0.43
PTBP1-203ENST00000356948 RRP12Q5JTH9 1297 aaKnown RBP17.71■□□□□ 0.43
PTBP1-203ENST00000356948 ALG1Q9BT22 464 aa17.71■□□□□ 0.43
PTBP1-203ENST00000356948 CPDO75976 1380 aa17.71■□□□□ 0.42
PTBP1-203ENST00000356948 EVCP57679 992 aa17.7■□□□□ 0.42
PTBP1-203ENST00000356948 NKX1-1Q15270 411 aaPredicted RBP17.7■□□□□ 0.42
PTBP1-203ENST00000356948 KIF6Q6ZMV9 814 aa17.7■□□□□ 0.42
PTBP1-203ENST00000356948 ANO10Q9NW15 660 aa17.7■□□□□ 0.42
PTBP1-203ENST00000356948 MYH15Q9Y2K3 1946 aa17.7■□□□□ 0.42
PTBP1-203ENST00000356948 UBN2Q6ZU65 1347 aa17.7■□□□□ 0.42
PTBP1-203ENST00000356948 ANO1Q5XXA6 986 aa17.7■□□□□ 0.42
PTBP1-203ENST00000356948 ARMCX5Q6P1M9 558 aa17.7■□□□□ 0.42
PTBP1-203ENST00000356948 VPS37DQ86XT2 251 aa17.7■□□□□ 0.42
PTBP1-203ENST00000356948 ARMT1Q9H993 441 aa17.7■□□□□ 0.42
PTBP1-203ENST00000356948 EPB41L4AQ9HCS5 686 aaPredicted RBP17.7■□□□□ 0.42
PTBP1-203ENST00000356948 hCG_1642624A0A1W2PR95 340 aa17.7■□□□□ 0.42
PTBP1-203ENST00000356948 CTIFO43310 598 aaKnown RBP17.7■□□□□ 0.42
PTBP1-203ENST00000356948 ATP2B1P20020 1258 aa17.7■□□□□ 0.42
PTBP1-203ENST00000356948 SHC4Q6S5L8 630 aa17.7■□□□□ 0.42
PTBP1-203ENST00000356948 TMC6Q7Z403 805 aa17.7■□□□□ 0.42
PTBP1-203ENST00000356948 FAM217BQ9NTX9 383 aaPredicted RBP17.7■□□□□ 0.42
PTBP1-203ENST00000356948 KCNJ14Q9UNX9 436 aa17.7■□□□□ 0.42
PTBP1-203ENST00000356948 TPM3P06753 285 aa17.69■□□□□ 0.42
PTBP1-203ENST00000356948 CEP135Q66GS9 1140 aa17.69■□□□□ 0.42
PTBP1-203ENST00000356948 FOXP4Q8IVH2 680 aaPredicted RBP17.69■□□□□ 0.42
PTBP1-203ENST00000356948 VGLL2Q8N8G2 317 aa17.69■□□□□ 0.42
PTBP1-203ENST00000356948 MIGA1Q8NAN2 632 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms