RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 LRRC4CQ9HCJ2 640 aa6.88□□□□□ -1.31
CD47-201ENST00000355354 JAG2Q9Y219 1238 aa6.88□□□□□ -1.31
CD47-201ENST00000355354 CACNA1IQ9P0X4 2223 aa6.88□□□□□ -1.31
CD47-201ENST00000355354 BDP1A6H8Y1 2624 aa6.88□□□□□ -1.31
CD47-201ENST00000355354 NBASA2RRP1 2371 aa6.88□□□□□ -1.31
CD47-201ENST00000355354 NBPF9Q3BBW0 867 aa6.88□□□□□ -1.31
CD47-201ENST00000355354 LMOD2Q6P5Q4 547 aa6.88□□□□□ -1.31
CD47-201ENST00000355354 C11orf57Q6ZUT1 292 aaPredicted RBP6.88□□□□□ -1.31
CD47-201ENST00000355354 NAP1L5Q96NT1 182 aaPredicted RBP6.88□□□□□ -1.31
CD47-201ENST00000355354 TMX1Q9H3N1 280 aa6.88□□□□□ -1.31
CD47-201ENST00000355354 PGAP2Q9UHJ9 254 aa6.88□□□□□ -1.31
CD47-201ENST00000355354 TTC3P53804 2025 aa6.88□□□□□ -1.31
CD47-201ENST00000355354 AKAP13Q12802 2813 aa6.88□□□□□ -1.31
CD47-201ENST00000355354 K7ELQ4 463 aaPredicted RBP6.88□□□□□ -1.31
CD47-201ENST00000355354 BEND3Q5T5X7 828 aa6.88□□□□□ -1.31
CD47-201ENST00000355354 INTS13Q9NVM9 706 aa6.88□□□□□ -1.31
CD47-201ENST00000355354 RP1P56715 2156 aa6.88□□□□□ -1.31
CD47-201ENST00000355354 MYH15Q9Y2K3 1946 aa6.88□□□□□ -1.31
CD47-201ENST00000355354 ERCC3P19447 782 aa6.88□□□□□ -1.31
CD47-201ENST00000355354 LARP1BQ659C4 914 aaKnown RBP6.88□□□□□ -1.31
CD47-201ENST00000355354 HELBQ8NG08 1087 aaPredicted RBP6.88□□□□□ -1.31
CD47-201ENST00000355354 SMARCC1Q92922 1105 aaPredicted RBP6.88□□□□□ -1.31
CD47-201ENST00000355354 DBNDD2Q9BQY9 259 aa6.88□□□□□ -1.31
CD47-201ENST00000355354 MTMR6Q9Y217 621 aa6.88□□□□□ -1.31
CD47-201ENST00000355354 LTBP2Q14767 1821 aa6.87□□□□□ -1.31
CD47-201ENST00000355354 CDC25AP30304 524 aa6.87□□□□□ -1.31
CD47-201ENST00000355354 GUCY1A2P33402 732 aa6.87□□□□□ -1.31
CD47-201ENST00000355354 GRIK5Q16478 980 aa6.87□□□□□ -1.31
CD47-201ENST00000355354 AKAP4Q5JQC9 854 aa6.87□□□□□ -1.31
CD47-201ENST00000355354 IFNL2Q8IZJ0 200 aa6.87□□□□□ -1.31
CD47-201ENST00000355354 RTF1Q92541 710 aaKnown RBP6.87□□□□□ -1.31
CD47-201ENST00000355354 CEP250Q9BV73 2442 aa6.87□□□□□ -1.31
CD47-201ENST00000355354 A0A0U1RQG5 324 aaPredicted RBP6.87□□□□□ -1.31
CD47-201ENST00000355354 CRKLP46109 303 aaKnown RBP6.87□□□□□ -1.31
CD47-201ENST00000355354 RGS19P49795 217 aa6.87□□□□□ -1.31
CD47-201ENST00000355354 HAND2P61296 217 aa6.87□□□□□ -1.31
CD47-201ENST00000355354 FKBP5Q13451 457 aaPredicted RBP6.87□□□□□ -1.31
CD47-201ENST00000355354 NLRP2Q9NX02 1062 aa6.87□□□□□ -1.31
CD47-201ENST00000355354 NBPF11Q86T75 865 aa6.87□□□□□ -1.31
CD47-201ENST00000355354 GRAMD1CQ8IYS0 662 aa6.87□□□□□ -1.31
CD47-201ENST00000355354 ESYT1Q9BSJ8 1104 aa6.87□□□□□ -1.31
CD47-201ENST00000355354 CPVLQ9H3G5 476 aa6.87□□□□□ -1.31
CD47-201ENST00000355354 IQSEC3Q9UPP2 1182 aaPredicted RBP6.87□□□□□ -1.31
CD47-201ENST00000355354 ABCC12Q96J65 1359 aa6.87□□□□□ -1.31
CD47-201ENST00000355354 RNMTO43148 476 aaKnown RBP6.87□□□□□ -1.31
CD47-201ENST00000355354 TAL1P17542 331 aaPredicted RBP6.87□□□□□ -1.31
CD47-201ENST00000355354 DPYDQ12882 1025 aa6.87□□□□□ -1.31
CD47-201ENST00000355354 GREB1LQ9C091 1923 aaPredicted RBP6.87□□□□□ -1.31
CD47-201ENST00000355354 MYO18AQ92614 2054 aaKnown RBP6.86□□□□□ -1.31
CD47-201ENST00000355354 IKZF4Q9H2S9 585 aa6.86□□□□□ -1.31
CD47-201ENST00000355354 NARFQ9UHQ1 456 aa6.86□□□□□ -1.31
CD47-201ENST00000355354 FCHSD2O94868 740 aa6.86□□□□□ -1.31
CD47-201ENST00000355354 ITGBL1O95965 494 aaPredicted RBP6.86□□□□□ -1.31
CD47-201ENST00000355354 CCDC82Q8N4S0 544 aa6.86□□□□□ -1.31
CD47-201ENST00000355354 PHKBQ93100 1093 aa6.86□□□□□ -1.31
CD47-201ENST00000355354 HYPKQ9NX55 129 aa6.86□□□□□ -1.31
CD47-201ENST00000355354 KIAA0100Q14667 2235 aaKnown RBP6.86□□□□□ -1.31
CD47-201ENST00000355354 KLRK1P26718 216 aa6.86□□□□□ -1.31
CD47-201ENST00000355354 CBX1P83916 185 aa6.86□□□□□ -1.31
CD47-201ENST00000355354 MTF1Q14872 753 aa6.86□□□□□ -1.31
CD47-201ENST00000355354 SLC35G1Q2M3R5 365 aa6.86□□□□□ -1.31
CD47-201ENST00000355354 BICC1Q9H694 974 aaKnown RBP6.86□□□□□ -1.31
CD47-201ENST00000355354 SCAF8Q9UPN6 1271 aaKnown RBP6.86□□□□□ -1.31
CD47-201ENST00000355354 PIEZO2Q9H5I5 2752 aa6.86□□□□□ -1.31
CD47-201ENST00000355354 SRGAP3O43295 1099 aa6.86□□□□□ -1.31
CD47-201ENST00000355354 EIF4A1P60842 406 aaKnown RBP6.86□□□□□ -1.31
CD47-201ENST00000355354 MYH16Q9H6N6 1097 aa6.86□□□□□ -1.31
CD47-201ENST00000355354 CYP2D7A0A087X1C5 515 aa6.85□□□□□ -1.31
CD47-201ENST00000355354 GRIN3BO60391 1043 aa6.85□□□□□ -1.31
CD47-201ENST00000355354 GNAI3P08754 354 aa6.85□□□□□ -1.31
CD47-201ENST00000355354 FSTL1Q12841 308 aa6.85□□□□□ -1.31
CD47-201ENST00000355354 NECTIN1Q15223 517 aa6.85□□□□□ -1.31
CD47-201ENST00000355354 STAMQ92783 540 aa6.85□□□□□ -1.31
CD47-201ENST00000355354 PTGS1P23219 599 aa6.85□□□□□ -1.31
CD47-201ENST00000355354 KIF28PB7ZC32 967 aa6.85□□□□□ -1.31
CD47-201ENST00000355354 SURF6O75683 361 aaKnown RBP6.85□□□□□ -1.31
CD47-201ENST00000355354 DPEP1P16444 411 aa6.85□□□□□ -1.31
CD47-201ENST00000355354 RFX5P48382 616 aaPredicted RBP6.85□□□□□ -1.31
CD47-201ENST00000355354 PPP1R9BQ96SB3 815 aa6.85□□□□□ -1.31
CD47-201ENST00000355354 RTFDC1Q9BY42 306 aaPredicted RBP6.85□□□□□ -1.31
CD47-201ENST00000355354 CITO14578 2027 aa6.84□□□□□ -1.31
CD47-201ENST00000355354 HAP1P54257 671 aaPredicted RBP6.84□□□□□ -1.31
CD47-201ENST00000355354 CCT2P78371 535 aaKnown RBP6.84□□□□□ -1.31
CD47-201ENST00000355354 CUL4AQ13619 759 aa6.84□□□□□ -1.31
CD47-201ENST00000355354 AMOTQ4VCS5 1084 aa6.84□□□□□ -1.31
CD47-201ENST00000355354 WWC2Q6AWC2 1192 aa6.84□□□□□ -1.31
CD47-201ENST00000355354 PRPF40BQ6NWY9 871 aaKnown RBP6.84□□□□□ -1.31
CD47-201ENST00000355354 FOXR1Q6PIV2 292 aa6.84□□□□□ -1.31
CD47-201ENST00000355354 FAM43AQ8N2R8 423 aa6.84□□□□□ -1.31
CD47-201ENST00000355354 EHD4Q9H223 541 aa6.84□□□□□ -1.31
CD47-201ENST00000355354 CHMP5Q9NZZ3 219 aa6.84□□□□□ -1.31
CD47-201ENST00000355354 AOX1Q06278 1338 aa6.84□□□□□ -1.31
CD47-201ENST00000355354 FKBP15Q5T1M5 1219 aa6.84□□□□□ -1.31
CD47-201ENST00000355354 OLFM4Q6UX06 510 aa6.84□□□□□ -1.31
CD47-201ENST00000355354 ADGRA1Q86SQ6 560 aa6.84□□□□□ -1.31
CD47-201ENST00000355354 SPNS2Q8IVW8 549 aa6.84□□□□□ -1.31
CD47-201ENST00000355354 LCMT1Q9UIC8 334 aa6.84□□□□□ -1.31
CD47-201ENST00000355354 CNTNAP1P78357 1384 aa6.84□□□□□ -1.31
CD47-201ENST00000355354 TATP17735 454 aaPredicted RBP6.84□□□□□ -1.31
CD47-201ENST00000355354 NASPP49321 788 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms