RNA–Protein interactions for RNA: ENST00000354785.8

FN1-203, Transcript of fibronectin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FN1, Length 8,905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-203ENST00000354785 CCDC129Q6ZRS4 1044 aa12.41□□□□□ -0.42
FN1-203ENST00000354785 ORAI2Q96SN7 254 aa12.41□□□□□ -0.42
FN1-203ENST00000354785 EFCAB6Q5THR3 1501 aa12.4□□□□□ -0.42
FN1-203ENST00000354785 BCORL1Q5H9F3 1711 aa12.4□□□□□ -0.42
FN1-203ENST00000354785 UBXN1Q04323 297 aa12.4□□□□□ -0.42
FN1-203ENST00000354785 TNNI3KQ59H18 835 aa12.4□□□□□ -0.42
FN1-203ENST00000354785 OTUD7AQ8TE49 926 aaPredicted RBP12.4□□□□□ -0.42
FN1-203ENST00000354785 TTC12Q9H892 705 aaPredicted RBP12.4□□□□□ -0.42
FN1-203ENST00000354785 ARFGAP3Q9NP61 516 aa12.4□□□□□ -0.42
FN1-203ENST00000354785 FPGT-TNNI3KV9GXZ4 949 aa12.4□□□□□ -0.42
FN1-203ENST00000354785 RIMBP2O15034 1052 aa12.4□□□□□ -0.42
FN1-203ENST00000354785 KLHDC4Q8TBB5 520 aa12.4□□□□□ -0.42
FN1-203ENST00000354785 CCDC175P0C221 793 aa12.4□□□□□ -0.42
FN1-203ENST00000354785 UBE4AQ14139 1066 aa12.4□□□□□ -0.42
FN1-203ENST00000354785 LGR6Q9HBX8 967 aa12.4□□□□□ -0.42
FN1-203ENST00000354785 MBD4O95243 580 aa12.4□□□□□ -0.42
FN1-203ENST00000354785 SPAG1Q07617 926 aa12.4□□□□□ -0.42
FN1-203ENST00000354785 CNBD1Q8NA66 436 aa12.4□□□□□ -0.42
FN1-203ENST00000354785 BICDL2A1A5D9 508 aa12.4□□□□□ -0.42
FN1-203ENST00000354785 ZNF594Q96JF6 807 aaPredicted RBP12.4□□□□□ -0.42
FN1-203ENST00000354785 PARP3Q9Y6F1 533 aa12.4□□□□□ -0.42
FN1-203ENST00000354785 VWA3AA6NCI4 1184 aa12.4□□□□□ -0.42
FN1-203ENST00000354785 NOLC1Q14978 699 aaKnown RBP eCLIP12.4□□□□□ -0.426e-51■□□□□ 11.3
FN1-203ENST00000354785 TRAPPC3LQ5T215 181 aa12.4□□□□□ -0.42
FN1-203ENST00000354785 MAP3K4Q9Y6R4 1608 aa12.4□□□□□ -0.42
FN1-203ENST00000354785 ANGEL1Q9UNK9 670 aaKnown RBP12.4□□□□□ -0.43
FN1-203ENST00000354785 CHL1O00533 1208 aa12.39□□□□□ -0.43
FN1-203ENST00000354785 KIAA0753Q2KHM9 967 aa12.39□□□□□ -0.43
FN1-203ENST00000354785 CCDC186Q7Z3E2 898 aa12.39□□□□□ -0.43
FN1-203ENST00000354785 INCENPQ9NQS7 918 aa12.39□□□□□ -0.43
FN1-203ENST00000354785 PNMA6EA0A0J9YXQ4 647 aa12.39□□□□□ -0.43
FN1-203ENST00000354785 MAATS1Q7Z4T9 603 aa12.39□□□□□ -0.43
FN1-203ENST00000354785 SELENOOQ9BVL4 669 aa12.39□□□□□ -0.43
FN1-203ENST00000354785 RNF216Q9NWF9 866 aaPredicted RBP12.39□□□□□ -0.43
FN1-203ENST00000354785 A0A1B0GVL5 298 aa12.39□□□□□ -0.43
FN1-203ENST00000354785 KRT13P13646 458 aa12.39□□□□□ -0.43
FN1-203ENST00000354785 CKAP4Q07065 602 aaKnown RBP12.39□□□□□ -0.43
FN1-203ENST00000354785 DNAI1Q9UI46 699 aa12.39□□□□□ -0.43
FN1-203ENST00000354785 SPDYE4A6NLX3 237 aa12.39□□□□□ -0.43
FN1-203ENST00000354785 HOXB7P09629 217 aa12.39□□□□□ -0.43
FN1-203ENST00000354785 TNNI2P48788 182 aa12.39□□□□□ -0.43
FN1-203ENST00000354785 UGGT1Q9NYU2 1555 aa12.39□□□□□ -0.43
FN1-203ENST00000354785 SLC27A2O14975 620 aa12.39□□□□□ -0.43
FN1-203ENST00000354785 ATL3Q6DD88 541 aa12.39□□□□□ -0.43
FN1-203ENST00000354785 TMEM87AQ8NBN3 555 aa12.39□□□□□ -0.43
FN1-203ENST00000354785 CCDC97Q96F63 343 aaPredicted RBP12.39□□□□□ -0.43
FN1-203ENST00000354785 WWC3Q9ULE0 1092 aa12.39□□□□□ -0.43
FN1-203ENST00000354785 B4E1Z4 1266 aa12.39□□□□□ -0.43
FN1-203ENST00000354785 PHACTR2O75167 634 aa12.39□□□□□ -0.43
FN1-203ENST00000354785 PARP1P09874 1014 aaKnown RBP12.39□□□□□ -0.43
FN1-203ENST00000354785 NEO1Q92859 1461 aa12.39□□□□□ -0.43
FN1-203ENST00000354785 DENND2AQ9ULE3 1009 aa12.39□□□□□ -0.43
FN1-203ENST00000354785 LAMC1P11047 1609 aa12.38□□□□□ -0.43
FN1-203ENST00000354785 FSD2A1L4K1 749 aa12.38□□□□□ -0.43
FN1-203ENST00000354785 GPAA1O43292 621 aa12.38□□□□□ -0.43
FN1-203ENST00000354785 FAM227BQ96M60 508 aa12.38□□□□□ -0.43
FN1-203ENST00000354785 FERMT1Q9BQL6 677 aa12.38□□□□□ -0.43
FN1-203ENST00000354785 BBXQ8WY36 941 aaPredicted RBP12.38□□□□□ -0.43
FN1-203ENST00000354785 SAP30BPQ9UHR5 308 aaKnown RBP12.38□□□□□ -0.43
FN1-203ENST00000354785 USP19O94966 1318 aa12.38□□□□□ -0.43
FN1-203ENST00000354785 ELP1O95163 1332 aa12.38□□□□□ -0.43
FN1-203ENST00000354785 SH3TC1Q8TE82 1336 aa12.38□□□□□ -0.43
FN1-203ENST00000354785 AOX1Q06278 1338 aa12.38□□□□□ -0.43
FN1-203ENST00000354785 CCNT1O60563 726 aaKnown RBP12.38□□□□□ -0.43
FN1-203ENST00000354785 KIF5AQ12840 1032 aa12.38□□□□□ -0.43
FN1-203ENST00000354785 XAGE2Q96GT9 111 aa12.38□□□□□ -0.43
FN1-203ENST00000354785 MYOM2P54296 1465 aa12.38□□□□□ -0.43
FN1-203ENST00000354785 EYA2O00167 538 aa12.38□□□□□ -0.43
FN1-203ENST00000354785 KRT79Q5XKE5 535 aa12.38□□□□□ -0.43
FN1-203ENST00000354785 IQUBQ8NA54 791 aa12.38□□□□□ -0.43
FN1-203ENST00000354785 IKBKGQ9Y6K9 419 aa12.38□□□□□ -0.43
FN1-203ENST00000354785 GON4LQ3T8J9 2241 aa12.38□□□□□ -0.43
FN1-203ENST00000354785 ACTN2P35609 894 aa12.37□□□□□ -0.43
FN1-203ENST00000354785 IFNKQ9P0W0 207 aa12.37□□□□□ -0.43
FN1-203ENST00000354785 FAM13AO94988 1023 aa12.37□□□□□ -0.43
FN1-203ENST00000354785 MCM6Q14566 821 aa12.37□□□□□ -0.43
FN1-203ENST00000354785 PDE4DIPQ5VU43 2346 aa12.37□□□□□ -0.43
FN1-203ENST00000354785 KRT86O43790 486 aa12.37□□□□□ -0.43
FN1-203ENST00000354785 JDP2Q8WYK2 163 aa12.37□□□□□ -0.43
FN1-203ENST00000354785 LLPHQ9BRT6 129 aaKnown RBP12.37□□□□□ -0.43
FN1-203ENST00000354785 STX17P56962 302 aa12.37□□□□□ -0.43
FN1-203ENST00000354785 DDX17Q92841 729 aaKnown RBP12.37□□□□□ -0.43
FN1-203ENST00000354785 HSF2BPO75031 334 aa12.37□□□□□ -0.43
FN1-203ENST00000354785 PDE8AO60658 829 aa12.36□□□□□ -0.43
FN1-203ENST00000354785 NEK11Q8NG66 645 aa12.36□□□□□ -0.43
FN1-203ENST00000354785 PLIN2Q99541 437 aa12.36□□□□□ -0.43
FN1-203ENST00000354785 IMPG2Q9BZV3 1241 aa12.36□□□□□ -0.43
FN1-203ENST00000354785 AATFQ9NY61 560 aaKnown RBP eCLIP12.36□□□□□ -0.432e-10■■■■■ 89.9
FN1-203ENST00000354785 POLR2DO15514 142 aaKnown RBP12.36□□□□□ -0.43
FN1-203ENST00000354785 SMC1AQ14683 1233 aaKnown RBP12.36□□□□□ -0.43
FN1-203ENST00000354785 NDUFB9Q9Y6M9 179 aa12.36□□□□□ -0.43
FN1-203ENST00000354785 CALRP27797 417 aaKnown RBP12.36□□□□□ -0.43
FN1-203ENST00000354785 TEX11Q8IYF3 940 aa12.36□□□□□ -0.43
FN1-203ENST00000354785 IBTKQ9P2D0 1353 aaPredicted RBP12.36□□□□□ -0.43
FN1-203ENST00000354785 RBM17Q96I25 401 aaKnown RBP12.36□□□□□ -0.43
FN1-203ENST00000354785 NCOA5Q9HCD5 579 aaKnown RBP12.36□□□□□ -0.43
FN1-203ENST00000354785 MRVI1Q9Y6F6 885 aa12.36□□□□□ -0.43
FN1-203ENST00000354785 CCT6AP40227 531 aaKnown RBP12.36□□□□□ -0.43
FN1-203ENST00000354785 RNF187Q5TA31 235 aaPredicted RBP12.36□□□□□ -0.43
FN1-203ENST00000354785 PRDM15P57071 1507 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms