RNA–Protein interactions for RNA: ENST00000349460.8

EPB41-203, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best) BASIC

Gene EPB41, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-203ENST00000349460 C3orf67Q6ZVT6 689 aa12.69□□□□□ -0.38
EPB41-203ENST00000349460 AIDAQ96BJ3 306 aa12.69□□□□□ -0.38
EPB41-203ENST00000349460 FAM84BQ96KN1 310 aaPredicted RBP12.69□□□□□ -0.38
EPB41-203ENST00000349460 CRAMP1Q96RY5 1269 aa12.69□□□□□ -0.38
EPB41-203ENST00000349460 KRT23Q9C075 422 aa12.69□□□□□ -0.38
EPB41-203ENST00000349460 LRRC4BQ9NT99 713 aa12.69□□□□□ -0.38
EPB41-203ENST00000349460 PODXL2Q9NZ53 605 aa12.69□□□□□ -0.38
EPB41-203ENST00000349460 PPP2R5BQ15173 497 aa12.68□□□□□ -0.38
EPB41-203ENST00000349460 PHF14O94880 888 aa12.68□□□□□ -0.38
EPB41-203ENST00000349460 UBE2HP62256 183 aa12.68□□□□□ -0.38
EPB41-203ENST00000349460 NFIXQ14938 502 aa12.68□□□□□ -0.38
EPB41-203ENST00000349460 SPTY2D1Q68D10 685 aaPredicted RBP12.68□□□□□ -0.38
EPB41-203ENST00000349460 RNF41Q9H4P4 317 aaPredicted RBP12.68□□□□□ -0.38
EPB41-203ENST00000349460 SRP68Q9UHB9 627 aaKnown RBP12.68□□□□□ -0.38
EPB41-203ENST00000349460 WWC3Q9ULE0 1092 aa12.68□□□□□ -0.38
EPB41-203ENST00000349460 TAF1P21675 1872 aa12.68□□□□□ -0.38
EPB41-203ENST00000349460 A0A0G2JS52 829 aa12.67□□□□□ -0.38
EPB41-203ENST00000349460 GYS1P13807 737 aa12.67□□□□□ -0.38
EPB41-203ENST00000349460 GTF2E1P29083 439 aaPredicted RBP12.67□□□□□ -0.38
EPB41-203ENST00000349460 PDIA3P30101 505 aaKnown RBP12.67□□□□□ -0.38
EPB41-203ENST00000349460 LARP1BQ659C4 914 aaKnown RBP12.67□□□□□ -0.38
EPB41-203ENST00000349460 BBOX1O75936 387 aa12.67□□□□□ -0.38
EPB41-203ENST00000349460 CHGBP05060 677 aa12.67□□□□□ -0.38
EPB41-203ENST00000349460 TRDNQ13061 729 aa12.67□□□□□ -0.38
EPB41-203ENST00000349460 PI16Q6UXB8 463 aa12.67□□□□□ -0.38
EPB41-203ENST00000349460 IFNL3Q8IZI9 196 aa12.67□□□□□ -0.38
EPB41-203ENST00000349460 TMTC2Q8N394 836 aa12.67□□□□□ -0.38
EPB41-203ENST00000349460 CNBD1Q8NA66 436 aa12.67□□□□□ -0.38
EPB41-203ENST00000349460 NSUN7Q8NE18 718 aaKnown RBP12.67□□□□□ -0.38
EPB41-203ENST00000349460 CELF1Q92879 486 aaKnown RBP12.67□□□□□ -0.38
EPB41-203ENST00000349460 NBPF3Q9H094 633 aa12.67□□□□□ -0.38
EPB41-203ENST00000349460 ANKRD31Q8N7Z5 1873 aa12.67□□□□□ -0.38
EPB41-203ENST00000349460 XDHP47989 1333 aa12.67□□□□□ -0.38
EPB41-203ENST00000349460 IDH1O75874 414 aaKnown RBP12.67□□□□□ -0.38
EPB41-203ENST00000349460 BCAMP50895 628 aa12.67□□□□□ -0.38
EPB41-203ENST00000349460 ST5P78524 1137 aa12.67□□□□□ -0.38
EPB41-203ENST00000349460 SCRN1Q12765 414 aa12.67□□□□□ -0.38
EPB41-203ENST00000349460 RALYLQ86SE5 291 aaKnown RBP12.67□□□□□ -0.38
EPB41-203ENST00000349460 SCAND2PQ9GZW5 306 aaPredicted RBP12.67□□□□□ -0.38
EPB41-203ENST00000349460 STK36Q9NRP7 1315 aa12.66□□□□□ -0.38
EPB41-203ENST00000349460 GSG1L2A8MUP6 293 aa12.66□□□□□ -0.38
EPB41-203ENST00000349460 NCLP19338 710 aaKnown RBP12.66□□□□□ -0.38
EPB41-203ENST00000349460 BRF1Q92994 677 aa12.66□□□□□ -0.38
EPB41-203ENST00000349460 MAGEB6Q8N7X4 407 aa12.66□□□□□ -0.38
EPB41-203ENST00000349460 GPT2Q8TD30 523 aa12.66□□□□□ -0.38
EPB41-203ENST00000349460 TCHHQ07283 1943 aa12.65□□□□□ -0.38
EPB41-203ENST00000349460 DDX60LQ5H9U9 1706 aaKnown RBP12.65□□□□□ -0.38
EPB41-203ENST00000349460 SH2B2O14492 632 aaPredicted RBP12.65□□□□□ -0.38
EPB41-203ENST00000349460 PRPF40AO75400 957 aaKnown RBP12.65□□□□□ -0.38
EPB41-203ENST00000349460 ANTXR2P58335 489 aa12.65□□□□□ -0.38
EPB41-203ENST00000349460 PRR5LQ6MZQ0 368 aa12.65□□□□□ -0.38
EPB41-203ENST00000349460 HELBQ8NG08 1087 aaPredicted RBP12.65□□□□□ -0.38
EPB41-203ENST00000349460 AKT1S1Q96B36 256 aa12.65□□□□□ -0.38
EPB41-203ENST00000349460 RBM17Q96I25 401 aaKnown RBP12.65□□□□□ -0.38
EPB41-203ENST00000349460 RIOK1Q9BRS2 568 aaKnown RBP12.65□□□□□ -0.38
EPB41-203ENST00000349460 TAOK2Q9UL54 1235 aa12.65□□□□□ -0.38
EPB41-203ENST00000349460 ANGEL1Q9UNK9 670 aaKnown RBP12.65□□□□□ -0.38
EPB41-203ENST00000349460 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.65□□□□□ -0.38
EPB41-203ENST00000349460 PRC1O43663 620 aa12.65□□□□□ -0.38
EPB41-203ENST00000349460 CDKL5O76039 1030 aa12.65□□□□□ -0.38
EPB41-203ENST00000349460 ATP2B4P23634 1241 aa12.65□□□□□ -0.38
EPB41-203ENST00000349460 HIBADHP31937 336 aaKnown RBP12.65□□□□□ -0.38
EPB41-203ENST00000349460 SBK1Q52WX2 424 aa12.65□□□□□ -0.38
EPB41-203ENST00000349460 FOCADQ5VW36 1801 aa12.65□□□□□ -0.38
EPB41-203ENST00000349460 KRT85P78386 507 aa12.64□□□□□ -0.39
EPB41-203ENST00000349460 AKNAD1Q5T1N1 836 aa12.64□□□□□ -0.39
EPB41-203ENST00000349460 WDR66Q8TBY9 1149 aa12.64□□□□□ -0.39
EPB41-203ENST00000349460 RESTQ13127 1097 aa12.64□□□□□ -0.39
EPB41-203ENST00000349460 NOL8Q76FK4 1167 aaKnown RBP12.64□□□□□ -0.39
EPB41-203ENST00000349460 AMIGO3Q86WK7 504 aa12.64□□□□□ -0.39
EPB41-203ENST00000349460 TDRD7Q8NHU6 1098 aaKnown RBP12.64□□□□□ -0.39
EPB41-203ENST00000349460 EPB41L4AQ9HCS5 686 aaPredicted RBP12.64□□□□□ -0.39
EPB41-203ENST00000349460 MBD4O95243 580 aa12.64□□□□□ -0.39
EPB41-203ENST00000349460 CTDNEP1O95476 244 aa12.64□□□□□ -0.39
EPB41-203ENST00000349460 TTLL5Q6EMB2 1281 aa12.64□□□□□ -0.39
EPB41-203ENST00000349460 NECAB1Q8N987 351 aa12.64□□□□□ -0.39
EPB41-203ENST00000349460 NAPBQ9H115 298 aa12.64□□□□□ -0.39
EPB41-203ENST00000349460 SUGT1Q9Y2Z0 365 aa12.64□□□□□ -0.39
EPB41-203ENST00000349460 MORC2Q9Y6X9 1032 aaPredicted RBP12.64□□□□□ -0.39
EPB41-203ENST00000349460 ECM29Q5VYK3 1845 aa12.63□□□□□ -0.39
EPB41-203ENST00000349460 COL9A3Q14050 684 aaPredicted RBP12.63□□□□□ -0.39
EPB41-203ENST00000349460 ZSCAN23Q3MJ62 389 aa12.63□□□□□ -0.39
EPB41-203ENST00000349460 USP48Q86UV5 1035 aa12.63□□□□□ -0.39
EPB41-203ENST00000349460 NLGN1Q8N2Q7 840 aa12.63□□□□□ -0.39
EPB41-203ENST00000349460 IGDCC4Q8TDY8 1250 aa12.63□□□□□ -0.39
EPB41-203ENST00000349460 ATP8A2Q9NTI2 1148 aa12.63□□□□□ -0.39
EPB41-203ENST00000349460 LRP2BPQ9P2M1 347 aa12.63□□□□□ -0.39
EPB41-203ENST00000349460 HPS5Q9UPZ3 1129 aa12.63□□□□□ -0.39
EPB41-203ENST00000349460 ROBO3Q96MS0 1386 aa12.63□□□□□ -0.39
EPB41-203ENST00000349460 MAGEB6P1A0A0J9YX57 407 aa12.63□□□□□ -0.39
EPB41-203ENST00000349460 POLRMTO00411 1230 aaKnown RBP12.63□□□□□ -0.39
EPB41-203ENST00000349460 IL1R1P14778 569 aa12.63□□□□□ -0.39
EPB41-203ENST00000349460 PPP4CP60510 307 aa12.63□□□□□ -0.39
EPB41-203ENST00000349460 GSTO1P78417 241 aa12.63□□□□□ -0.39
EPB41-203ENST00000349460 SLFNL1Q499Z3 407 aa12.63□□□□□ -0.39
EPB41-203ENST00000349460 LRSAM1Q6UWE0 723 aa12.63□□□□□ -0.39
EPB41-203ENST00000349460 NSUN4Q96CB9 384 aaKnown RBP12.63□□□□□ -0.39
EPB41-203ENST00000349460 GRPEL1Q9HAV7 217 aa12.63□□□□□ -0.39
EPB41-203ENST00000349460 CFAP45Q9UL16 551 aa12.63□□□□□ -0.39
EPB41-203ENST00000349460 FAM177BA6PVY3 158 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms