RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.51■□□□□ 0.87
APP-202ENST00000348990 KIF28PB7ZC32 967 aa20.51■□□□□ 0.87
APP-202ENST00000348990 WDHD1O75717 1129 aaPredicted RBP20.51■□□□□ 0.87
APP-202ENST00000348990 ZSCAN26Q16670 478 aa20.51■□□□□ 0.87
APP-202ENST00000348990 TRIM65Q6PJ69 517 aa20.51■□□□□ 0.87
APP-202ENST00000348990 DSCC1Q9BVC3 393 aa20.51■□□□□ 0.87
APP-202ENST00000348990 PARP3Q9Y6F1 533 aa20.51■□□□□ 0.87
APP-202ENST00000348990 CCDC158Q5M9N0 1113 aa20.5■□□□□ 0.87
APP-202ENST00000348990 ANKRD24Q8TF21 1146 aa20.5■□□□□ 0.87
APP-202ENST00000348990 ZNF594Q96JF6 807 aaPredicted RBP20.5■□□□□ 0.87
APP-202ENST00000348990 POLR3EQ9NVU0 708 aa20.5■□□□□ 0.87
APP-202ENST00000348990 SETD1AO15047 1707 aaKnown RBP20.5■□□□□ 0.87
APP-202ENST00000348990 SASH3O75995 380 aa20.5■□□□□ 0.87
APP-202ENST00000348990 CMA1P23946 247 aa20.5■□□□□ 0.87
APP-202ENST00000348990 CC2D1AQ6P1N0 951 aaPredicted RBP20.5■□□□□ 0.87
APP-202ENST00000348990 ZNF790Q6PG37 636 aa20.5■□□□□ 0.87
APP-202ENST00000348990 JMYQ8N9B5 988 aa20.5■□□□□ 0.87
APP-202ENST00000348990 PARD6BQ9BYG5 372 aa20.5■□□□□ 0.87
APP-202ENST00000348990 ZRANB2O95218 330 aaKnown RBP eCLIP20.49■□□□□ 0.87
APP-202ENST00000348990 BRAPQ7Z569 592 aa20.49■□□□□ 0.87
APP-202ENST00000348990 ALG1Q9BT22 464 aa20.49■□□□□ 0.87
APP-202ENST00000348990 KCND1Q9NSA2 647 aa20.49■□□□□ 0.87
APP-202ENST00000348990 RNF113AO15541 343 aaKnown RBP20.49■□□□□ 0.87
APP-202ENST00000348990 ARHGAP6O43182 974 aa20.49■□□□□ 0.87
APP-202ENST00000348990 TRDNQ13061 729 aa20.49■□□□□ 0.87
APP-202ENST00000348990 TRMT44Q8IYL2 757 aaKnown RBP20.49■□□□□ 0.87
APP-202ENST00000348990 NLRP2Q9NX02 1062 aa20.49■□□□□ 0.87
APP-202ENST00000348990 MAST3O60307 1309 aa20.49■□□□□ 0.87
APP-202ENST00000348990 TRIM29Q14134 588 aa20.49■□□□□ 0.87
APP-202ENST00000348990 NFXL1Q6ZNB6 911 aa20.49■□□□□ 0.87
APP-202ENST00000348990 REXO1L1PQ8IX06 675 aa20.49■□□□□ 0.87
APP-202ENST00000348990 BPIFA3Q9BQP9 254 aa20.49■□□□□ 0.87
APP-202ENST00000348990 PDIA6Q15084 440 aa20.48■□□□□ 0.87
APP-202ENST00000348990 CCDC102BQ68D86 513 aa20.48■□□□□ 0.87
APP-202ENST00000348990 TBC1D8O95759 1140 aa20.48■□□□□ 0.87
APP-202ENST00000348990 FAM193AP78312 1265 aa20.48■□□□□ 0.87
APP-202ENST00000348990 MPHOSPH8Q99549 860 aa20.48■□□□□ 0.87
APP-202ENST00000348990 CWC15Q9P013 229 aaKnown RBP20.48■□□□□ 0.87
APP-202ENST00000348990 ZNF827Q17R98 1081 aa20.48■□□□□ 0.87
APP-202ENST00000348990 TOGARAM2Q6ZUX3 1019 aa20.48■□□□□ 0.87
APP-202ENST00000348990 MICU3Q86XE3 530 aa20.48■□□□□ 0.87
APP-202ENST00000348990 VSTM4Q8IW00 320 aa20.48■□□□□ 0.87
APP-202ENST00000348990 GPR161Q8N6U8 529 aaKnown RBP20.48■□□□□ 0.87
APP-202ENST00000348990 RAPGEF4Q8WZA2 1011 aa20.48■□□□□ 0.87
APP-202ENST00000348990 PHKBQ93100 1093 aa20.48■□□□□ 0.87
APP-202ENST00000348990 ZNF496Q96IT1 587 aaPredicted RBP20.48■□□□□ 0.87
APP-202ENST00000348990 IRX2Q9BZI1 471 aaPredicted RBP20.48■□□□□ 0.87
APP-202ENST00000348990 M0R2C6 588 aa20.47■□□□□ 0.87
APP-202ENST00000348990 IKBKBO14920 756 aa20.47■□□□□ 0.87
APP-202ENST00000348990 ZMYM1Q5SVZ6 1142 aa20.47■□□□□ 0.87
APP-202ENST00000348990 DHX58Q96C10 678 aa20.47■□□□□ 0.87
APP-202ENST00000348990 VPS18Q9P253 973 aa20.47■□□□□ 0.87
APP-202ENST00000348990 PCDHA5Q9Y5H7 936 aa20.47■□□□□ 0.87
APP-202ENST00000348990 UTYO14607 1347 aa20.47■□□□□ 0.87
APP-202ENST00000348990 VWA3AA6NCI4 1184 aa20.47■□□□□ 0.87
APP-202ENST00000348990 GOLGA1Q92805 767 aa20.47■□□□□ 0.87
APP-202ENST00000348990 MROH7-TTC4A0A0A0MT08 1334 aa20.47■□□□□ 0.87
APP-202ENST00000348990 PHACTR2O75167 634 aa20.46■□□□□ 0.87
APP-202ENST00000348990 KIF23Q02241 960 aaPredicted RBP20.46■□□□□ 0.87
APP-202ENST00000348990 KLHL10Q6JEL2 608 aa20.46■□□□□ 0.87
APP-202ENST00000348990 CPLX2Q6PUV4 134 aaKnown RBP20.46■□□□□ 0.87
APP-202ENST00000348990 SH3TC1Q8TE82 1336 aa20.46■□□□□ 0.87
APP-202ENST00000348990 FANCGO15287 622 aa20.46■□□□□ 0.87
APP-202ENST00000348990 CCDC82Q8N4S0 544 aa20.46■□□□□ 0.87
APP-202ENST00000348990 KCNH5Q8NCM2 988 aa20.46■□□□□ 0.87
APP-202ENST00000348990 OSBP2Q969R2 916 aa20.46■□□□□ 0.87
APP-202ENST00000348990 ZNF213O14771 459 aa20.46■□□□□ 0.87
APP-202ENST00000348990 RFX5P48382 616 aaPredicted RBP20.46■□□□□ 0.87
APP-202ENST00000348990 ZC3H6P61129 1189 aaKnown RBP20.46■□□□□ 0.87
APP-202ENST00000348990 TTC39AQ5SRH9 613 aa20.46■□□□□ 0.87
APP-202ENST00000348990 AXDND1Q5T1B0 1012 aaPredicted RBP20.46■□□□□ 0.87
APP-202ENST00000348990 LEKR1Q6ZMV7 388 aa20.46■□□□□ 0.87
APP-202ENST00000348990 VPS37DQ86XT2 251 aa20.46■□□□□ 0.87
APP-202ENST00000348990 TSPYL1Q9H0U9 437 aa20.45■□□□□ 0.86
APP-202ENST00000348990 FEZ2Q9UHY8 353 aaPredicted RBP20.45■□□□□ 0.86
APP-202ENST00000348990 FOXN1O15353 648 aa20.45■□□□□ 0.86
APP-202ENST00000348990 KCNJ6P48051 423 aa20.45■□□□□ 0.86
APP-202ENST00000348990 SLC39A14Q15043 492 aa20.45■□□□□ 0.86
APP-202ENST00000348990 NCOA7Q8NI08 942 aa20.45■□□□□ 0.86
APP-202ENST00000348990 NFE2L3Q9Y4A8 694 aa20.45■□□□□ 0.86
APP-202ENST00000348990 SALL1Q9NSC2 1324 aa20.45■□□□□ 0.86
APP-202ENST00000348990 CSB-PGBD3P0DP91 1061 aa20.45■□□□□ 0.86
APP-202ENST00000348990 LONRF3Q496Y0 759 aa20.45■□□□□ 0.86
APP-202ENST00000348990 LRRC24Q50LG9 513 aa20.45■□□□□ 0.86
APP-202ENST00000348990 TBX22Q9Y458 520 aa20.45■□□□□ 0.86
APP-202ENST00000348990 PLEKHG1Q9ULL1 1385 aa20.44■□□□□ 0.86
APP-202ENST00000348990 TRIM66O15016 1216 aa20.44■□□□□ 0.86
APP-202ENST00000348990 FGAP02671 866 aa20.44■□□□□ 0.86
APP-202ENST00000348990 KIF4BQ2VIQ3 1234 aa20.44■□□□□ 0.86
APP-202ENST00000348990 TAF7LQ5H9L4 462 aa20.44■□□□□ 0.86
APP-202ENST00000348990 JAKMIP3Q5VZ66 844 aa20.44■□□□□ 0.86
APP-202ENST00000348990 CCDC102AQ96A19 550 aa20.44■□□□□ 0.86
APP-202ENST00000348990 RSPH14Q9UHP6 348 aa20.44■□□□□ 0.86
APP-202ENST00000348990 A0A1B0GUL7 405 aa20.44■□□□□ 0.86
APP-202ENST00000348990 LONRF2Q1L5Z9 754 aa20.44■□□□□ 0.86
APP-202ENST00000348990 ADAM21Q9UKJ8 722 aa20.44■□□□□ 0.86
APP-202ENST00000348990 KCNH3Q9ULD8 1083 aa20.44■□□□□ 0.86
APP-202ENST00000348990 JCADQ9P266 1359 aa20.44■□□□□ 0.86
APP-202ENST00000348990 RHOXF2BP0C7M4 288 aa20.43■□□□□ 0.86
APP-202ENST00000348990 METAP2P50579 478 aaKnown RBP eCLIP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms