RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 INTS13Q9NVM9 706 aa17.61■□□□□ 0.41
LMNA-201ENST00000347559 CASP8Q14790 479 aa17.6■□□□□ 0.41
LMNA-201ENST00000347559 CPLX3Q8WVH0 158 aa17.6■□□□□ 0.41
LMNA-201ENST00000347559 RNF216Q9NWF9 866 aaPredicted RBP17.6■□□□□ 0.41
LMNA-201ENST00000347559 MKRN1Q9UHC7 482 aaKnown RBP17.6■□□□□ 0.41
LMNA-201ENST00000347559 L1RE1Q9UN81 338 aa17.6■□□□□ 0.41
LMNA-201ENST00000347559 IGSF1Q8N6C5 1336 aa17.6■□□□□ 0.41
LMNA-201ENST00000347559 APPP05067 770 aa17.6■□□□□ 0.41
LMNA-201ENST00000347559 FDPSP14324 419 aaKnown RBP17.6■□□□□ 0.41
LMNA-201ENST00000347559 PDIA3P30101 505 aaKnown RBP17.6■□□□□ 0.41
LMNA-201ENST00000347559 PEAK1Q9H792 1746 aa17.59■□□□□ 0.41
LMNA-201ENST00000347559 STX10O60499 249 aa17.59■□□□□ 0.41
LMNA-201ENST00000347559 EIF4A1P60842 406 aaKnown RBP17.59■□□□□ 0.41
LMNA-201ENST00000347559 VSNL1P62760 191 aa17.59■□□□□ 0.41
LMNA-201ENST00000347559 ZNF569Q5MCW4 686 aa17.59■□□□□ 0.41
LMNA-201ENST00000347559 MROH7-TTC4A0A0A0MT08 1334 aa17.59■□□□□ 0.41
LMNA-201ENST00000347559 MYSM1Q5VVJ2 828 aa17.59■□□□□ 0.41
LMNA-201ENST00000347559 TC2NQ8N9U0 490 aa17.59■□□□□ 0.41
LMNA-201ENST00000347559 LGR6Q9HBX8 967 aa17.59■□□□□ 0.41
LMNA-201ENST00000347559 FLT4P35916 1363 aa17.59■□□□□ 0.41
LMNA-201ENST00000347559 SOWAHDA6NJG2 315 aa17.58■□□□□ 0.41
LMNA-201ENST00000347559 NPM1P06748 294 aaKnown RBP eCLIP17.58■□□□□ 0.41
LMNA-201ENST00000347559 PROSER3Q2NL68 480 aa17.58■□□□□ 0.41
LMNA-201ENST00000347559 MCMDC2Q4G0Z9 681 aa17.58■□□□□ 0.41
LMNA-201ENST00000347559 HDAC5Q9UQL6 1122 aa17.58■□□□□ 0.41
LMNA-201ENST00000347559 PRR29P0C7W0 189 aa17.58■□□□□ 0.4
LMNA-201ENST00000347559 RABEP2Q9H5N1 569 aa17.58■□□□□ 0.4
LMNA-201ENST00000347559 OVOS2A0A0J9YW53 1432 aa17.57■□□□□ 0.4
LMNA-201ENST00000347559 OVOS2Q6IE36 1432 aa17.57■□□□□ 0.4
LMNA-201ENST00000347559 KDRP35968 1356 aa17.57■□□□□ 0.4
LMNA-201ENST00000347559 YEATS4O95619 227 aa17.57■□□□□ 0.4
LMNA-201ENST00000347559 CCDC175P0C221 793 aa17.57■□□□□ 0.4
LMNA-201ENST00000347559 CHRM1P11229 460 aaPredicted RBP17.57■□□□□ 0.4
LMNA-201ENST00000347559 ANO1Q5XXA6 986 aa17.57■□□□□ 0.4
LMNA-201ENST00000347559 TRMT44Q8IYL2 757 aaKnown RBP17.57■□□□□ 0.4
LMNA-201ENST00000347559 CEP112Q8N8E3 955 aa17.57■□□□□ 0.4
LMNA-201ENST00000347559 KIF5CO60282 957 aa17.57■□□□□ 0.4
LMNA-201ENST00000347559 HMGB1P09429 215 aaKnown RBP17.57■□□□□ 0.4
LMNA-201ENST00000347559 PDE4BQ07343 736 aa17.57■□□□□ 0.4
LMNA-201ENST00000347559 SPECC1LQ69YQ0 1117 aa17.57■□□□□ 0.4
LMNA-201ENST00000347559 HNRNPLLQ8WVV9 542 aaKnown RBP17.57■□□□□ 0.4
LMNA-201ENST00000347559 CDC23Q9UJX2 597 aa17.57■□□□□ 0.4
LMNA-201ENST00000347559 ZNF609O15014 1411 aa17.57■□□□□ 0.4
LMNA-201ENST00000347559 GRM8O00222 908 aa17.56■□□□□ 0.4
LMNA-201ENST00000347559 CMA1P23946 247 aa17.56■□□□□ 0.4
LMNA-201ENST00000347559 LIG3P49916 1009 aa17.56■□□□□ 0.4
LMNA-201ENST00000347559 AXDND1Q5T1B0 1012 aaPredicted RBP17.56■□□□□ 0.4
LMNA-201ENST00000347559 FAM71BQ8TC56 605 aa17.56■□□□□ 0.4
LMNA-201ENST00000347559 KAZALD1Q96I82 304 aa17.56■□□□□ 0.4
LMNA-201ENST00000347559 POLR3EQ9NVU0 708 aa17.56■□□□□ 0.4
LMNA-201ENST00000347559 KIF28PB7ZC32 967 aa17.56■□□□□ 0.4
LMNA-201ENST00000347559 RPS6KA5O75582 802 aa17.56■□□□□ 0.4
LMNA-201ENST00000347559 DNAJC21Q5F1R6 531 aaKnown RBP17.56■□□□□ 0.4
LMNA-201ENST00000347559 GDAP1L1Q96MZ0 367 aa17.56■□□□□ 0.4
LMNA-201ENST00000347559 DBNLQ9UJU6 430 aaKnown RBP17.56■□□□□ 0.4
LMNA-201ENST00000347559 C3P01024 1663 aa17.56■□□□□ 0.4
LMNA-201ENST00000347559 LRRIQ3A6PVS8 624 aaPredicted RBP17.56■□□□□ 0.4
LMNA-201ENST00000347559 TADA2BQ86TJ2 420 aa17.56■□□□□ 0.4
LMNA-201ENST00000347559 POTEB2H3BUK9 544 aa17.55■□□□□ 0.4
LMNA-201ENST00000347559 RNF40O75150 1001 aa17.55■□□□□ 0.4
LMNA-201ENST00000347559 CDC27P30260 824 aa17.55■□□□□ 0.4
LMNA-201ENST00000347559 MMS22LQ6ZRQ5 1243 aa17.55■□□□□ 0.4
LMNA-201ENST00000347559 CLIC6Q96NY7 704 aa17.55■□□□□ 0.4
LMNA-201ENST00000347559 SALL1Q9NSC2 1324 aa17.55■□□□□ 0.4
LMNA-201ENST00000347559 PPFIA4O75335 1185 aa17.55■□□□□ 0.4
LMNA-201ENST00000347559 EFCAB13Q8IY85 973 aa17.55■□□□□ 0.4
LMNA-201ENST00000347559 STK11IPQ8N1F8 1099 aa17.55■□□□□ 0.4
LMNA-201ENST00000347559 NFE2L3Q9Y4A8 694 aa17.55■□□□□ 0.4
LMNA-201ENST00000347559 PCDHA5Q9Y5H7 936 aa17.55■□□□□ 0.4
LMNA-201ENST00000347559 SBNO1A3KN83 1393 aa17.55■□□□□ 0.4
LMNA-201ENST00000347559 E7EWF7 191 aa17.54■□□□□ 0.4
LMNA-201ENST00000347559 CPLX1O14810 134 aa17.54■□□□□ 0.4
LMNA-201ENST00000347559 MNAT1P51948 309 aa17.54■□□□□ 0.4
LMNA-201ENST00000347559 ZNF827Q17R98 1081 aa17.54■□□□□ 0.4
LMNA-201ENST00000347559 MCTP2Q6DN12 878 aa17.54■□□□□ 0.4
LMNA-201ENST00000347559 MON2Q7Z3U7 1717 aa17.54■□□□□ 0.4
LMNA-201ENST00000347559 FOXN1O15353 648 aa17.54■□□□□ 0.4
LMNA-201ENST00000347559 AKAP17AQ02040 695 aaKnown RBP17.54■□□□□ 0.4
LMNA-201ENST00000347559 SPECC1Q5M775 1068 aa17.54■□□□□ 0.4
LMNA-201ENST00000347559 EP400NLQ6ZTU2 488 aa17.54■□□□□ 0.4
LMNA-201ENST00000347559 ACBD3Q9H3P7 528 aa17.54■□□□□ 0.4
LMNA-201ENST00000347559 DBF4Q9UBU7 674 aaPredicted RBP17.54■□□□□ 0.4
LMNA-201ENST00000347559 TUBE1Q9UJT0 475 aa17.54■□□□□ 0.4
LMNA-201ENST00000347559 RAB21Q9UL25 225 aa17.54■□□□□ 0.4
LMNA-201ENST00000347559 JCADQ9P266 1359 aa17.54■□□□□ 0.4
LMNA-201ENST00000347559 USP5P45974 858 aa17.54■□□□□ 0.4
LMNA-201ENST00000347559 TBX2Q13207 712 aaPredicted RBP17.54■□□□□ 0.4
LMNA-201ENST00000347559 KSR2Q6VAB6 950 aa17.54■□□□□ 0.4
LMNA-201ENST00000347559 CCDC91Q7Z6B0 441 aa17.54■□□□□ 0.4
LMNA-201ENST00000347559 AFAP1L1Q8TED9 768 aa17.54■□□□□ 0.4
LMNA-201ENST00000347559 C19orf44Q9H6X5 657 aa17.54■□□□□ 0.4
LMNA-201ENST00000347559 CTAGE15A4D2H0 777 aa17.53■□□□□ 0.4
LMNA-201ENST00000347559 CTAGE8P0CG41 777 aa17.53■□□□□ 0.4
LMNA-201ENST00000347559 EXOSC10Q01780 885 aaKnown RBP17.53■□□□□ 0.4
LMNA-201ENST00000347559 CTAGE6Q86UF2 777 aa17.53■□□□□ 0.4
LMNA-201ENST00000347559 CTAGE4Q8IX94 777 aa17.53■□□□□ 0.4
LMNA-201ENST00000347559 RIN2Q8WYP3 895 aaPredicted RBP17.53■□□□□ 0.4
LMNA-201ENST00000347559 CDC5LQ99459 802 aaKnown RBP17.53■□□□□ 0.4
LMNA-201ENST00000347559 DBNDD2Q9BQY9 259 aa17.53■□□□□ 0.4
LMNA-201ENST00000347559 CACNA1FO60840 1977 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms