RNA–Protein interactions for RNA: ENST00000341181.10

CLDND1-201, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-201ENST00000341181 ZFYP08048 801 aaPredicted RBP24.83■■□□□ 1.57
CLDND1-201ENST00000341181 PSME4Q14997 1843 aa24.83■■□□□ 1.57
CLDND1-201ENST00000341181 USP17L3A6NCW0 530 aa24.83■■□□□ 1.56
CLDND1-201ENST00000341181 USP17L4A6NCW7 530 aa24.83■■□□□ 1.56
CLDND1-201ENST00000341181 UBE3CQ15386 1083 aa24.83■■□□□ 1.56
CLDND1-201ENST00000341181 DIXDC1Q155Q3 683 aa24.83■■□□□ 1.56
CLDND1-201ENST00000341181 STRIP1Q5VSL9 837 aa24.83■■□□□ 1.56
CLDND1-201ENST00000341181 USP17L1Q7RTZ2 530 aa24.83■■□□□ 1.56
CLDND1-201ENST00000341181 ZGPATQ8N5A5 531 aaKnown RBP24.83■■□□□ 1.56
CLDND1-201ENST00000341181 APPBP2Q92624 585 aa24.83■■□□□ 1.56
CLDND1-201ENST00000341181 TBC1D22AQ8WUA7 517 aa24.82■■□□□ 1.56
CLDND1-201ENST00000341181 IPO9Q96P70 1041 aaKnown RBP24.82■■□□□ 1.56
CLDND1-201ENST00000341181 ZNRF3Q9ULT6 936 aa24.82■■□□□ 1.56
CLDND1-201ENST00000341181 F8W031 263 aaPredicted RBP24.81■■□□□ 1.56
CLDND1-201ENST00000341181 ZSCAN25Q6NSZ9 544 aa24.81■■□□□ 1.56
CLDND1-201ENST00000341181 DZIP1Q86YF9 867 aaKnown RBP24.81■■□□□ 1.56
CLDND1-201ENST00000341181 LRRFIP1Q32MZ4 808 aaKnown RBP24.81■■□□□ 1.56
CLDND1-201ENST00000341181 NAA16Q6N069 864 aaPredicted RBP24.81■■□□□ 1.56
CLDND1-201ENST00000341181 MIGA1Q8NAN2 632 aa24.81■■□□□ 1.56
CLDND1-201ENST00000341181 JDP2Q8WYK2 163 aa24.81■■□□□ 1.56
CLDND1-201ENST00000341181 ANO2Q9NQ90 1003 aa24.81■■□□□ 1.56
CLDND1-201ENST00000341181 PSMD14O00487 310 aa24.8■■□□□ 1.56
CLDND1-201ENST00000341181 CYP7A1P22680 504 aa24.8■■□□□ 1.56
CLDND1-201ENST00000341181 MCMDC2Q4G0Z9 681 aa24.8■■□□□ 1.56
CLDND1-201ENST00000341181 TICAM2Q86XR7 235 aa24.8■■□□□ 1.56
CLDND1-201ENST00000341181 RUFY2Q8WXA3 655 aa24.8■■□□□ 1.56
CLDND1-201ENST00000341181 SBF1O95248 1867 aa24.8■■□□□ 1.56
CLDND1-201ENST00000341181 ADAMTSL1Q8N6G6 1762 aa24.8■■□□□ 1.56
CLDND1-201ENST00000341181 RAD50Q92878 1312 aa24.8■■□□□ 1.56
CLDND1-201ENST00000341181 GPR162Q16538 588 aa24.8■■□□□ 1.56
CLDND1-201ENST00000341181 SPTY2D1Q68D10 685 aaPredicted RBP24.8■■□□□ 1.56
CLDND1-201ENST00000341181 HELLSQ9NRZ9 838 aa24.8■■□□□ 1.56
CLDND1-201ENST00000341181 CXCL9Q07325 125 aa24.78■■□□□ 1.56
CLDND1-201ENST00000341181 VPS53Q5VIR6 699 aa24.78■■□□□ 1.56
CLDND1-201ENST00000341181 KIAA0825Q8IV33 1275 aa24.78■■□□□ 1.56
CLDND1-201ENST00000341181 CCDC171Q6TFL3 1326 aa24.78■■□□□ 1.56
CLDND1-201ENST00000341181 LMNB1P20700 586 aa24.78■■□□□ 1.56
CLDND1-201ENST00000341181 PTH1RQ03431 593 aa24.78■■□□□ 1.56
CLDND1-201ENST00000341181 GPAA1O43292 621 aa24.77■■□□□ 1.56
CLDND1-201ENST00000341181 LSG1Q9H089 658 aaKnown RBP24.77■■□□□ 1.56
CLDND1-201ENST00000341181 ZBTB12Q9Y330 459 aaPredicted RBP24.77■■□□□ 1.56
CLDND1-201ENST00000341181 TTF2Q9UNY4 1162 aaKnown RBP24.77■■□□□ 1.56
CLDND1-201ENST00000341181 MYH2Q9UKX2 1941 aa24.76■■□□□ 1.55
CLDND1-201ENST00000341181 FOXP2O15409 715 aa24.76■■□□□ 1.55
CLDND1-201ENST00000341181 MBD4O95243 580 aa24.76■■□□□ 1.55
CLDND1-201ENST00000341181 SCNN1DP51172 638 aa24.76■■□□□ 1.55
CLDND1-201ENST00000341181 LCORLQ8N3X6 602 aa24.76■■□□□ 1.55
CLDND1-201ENST00000341181 REC8O95072 547 aa24.76■■□□□ 1.55
CLDND1-201ENST00000341181 ARMT1Q9H993 441 aa24.76■■□□□ 1.55
CLDND1-201ENST00000341181 ZNF541Q9H0D2 1346 aa24.75■■□□□ 1.55
CLDND1-201ENST00000341181 FZD9O00144 591 aa24.75■■□□□ 1.55
CLDND1-201ENST00000341181 VIL1P09327 827 aaKnown RBP24.75■■□□□ 1.55
CLDND1-201ENST00000341181 DYNLL1P63167 89 aaKnown RBP24.75■■□□□ 1.55
CLDND1-201ENST00000341181 DICER1Q9UPY3 1922 aaKnown RBP24.75■■□□□ 1.55
CLDND1-201ENST00000341181 RSBN1LQ6PCB5 846 aaPredicted RBP24.74■■□□□ 1.55
CLDND1-201ENST00000341181 AIDAQ96BJ3 306 aa24.74■■□□□ 1.55
CLDND1-201ENST00000341181 RIOK1Q9BRS2 568 aaKnown RBP24.74■■□□□ 1.55
CLDND1-201ENST00000341181 USP26Q9BXU7 913 aa24.74■■□□□ 1.55
CLDND1-201ENST00000341181 AATFQ9NY61 560 aaKnown RBP eCLIP24.74■■□□□ 1.55
CLDND1-201ENST00000341181 TIAM2Q8IVF5 1701 aa24.74■■□□□ 1.55
CLDND1-201ENST00000341181 FKBP1AP62942 108 aaKnown RBP24.74■■□□□ 1.55
CLDND1-201ENST00000341181 SUGT1Q9Y2Z0 365 aa24.74■■□□□ 1.55
CLDND1-201ENST00000341181 PCDHAC2Q9Y5I4 1007 aa24.74■■□□□ 1.55
CLDND1-201ENST00000341181 MROH7-TTC4A0A0A0MT08 1334 aa24.74■■□□□ 1.55
CLDND1-201ENST00000341181 RNF181Q9P0P0 153 aa24.73■■□□□ 1.55
CLDND1-201ENST00000341181 CIAPIN1Q6FI81 312 aa24.73■■□□□ 1.55
CLDND1-201ENST00000341181 GMLQ99445 158 aa24.73■■□□□ 1.55
CLDND1-201ENST00000341181 STRBPQ96SI9 672 aaKnown RBP24.72■■□□□ 1.55
CLDND1-201ENST00000341181 HSPD1P10809 573 aaKnown RBP24.71■■□□□ 1.55
CLDND1-201ENST00000341181 DAGLAQ9Y4D2 1042 aa24.71■■□□□ 1.55
CLDND1-201ENST00000341181 GAKO14976 1311 aa24.71■■□□□ 1.55
CLDND1-201ENST00000341181 MAGEB6P1A0A0J9YX57 407 aa24.71■■□□□ 1.55
CLDND1-201ENST00000341181 PRKAB2O43741 272 aa24.71■■□□□ 1.55
CLDND1-201ENST00000341181 SLC4A3P48751 1232 aa24.71■■□□□ 1.55
CLDND1-201ENST00000341181 KIAA1211Q6ZU35 1233 aa24.71■■□□□ 1.55
CLDND1-201ENST00000341181 GSTO1P78417 241 aa24.7■■□□□ 1.55
CLDND1-201ENST00000341181 SHTN1A0MZ66 631 aa24.7■■□□□ 1.54
CLDND1-201ENST00000341181 C9orf131Q5VYM1 1079 aa24.7■■□□□ 1.54
CLDND1-201ENST00000341181 BTDP43251 543 aa24.69■■□□□ 1.54
CLDND1-201ENST00000341181 TBC1D32Q96NH3 1257 aa24.69■■□□□ 1.54
CLDND1-201ENST00000341181 C22orf23Q9BZE7 217 aa24.69■■□□□ 1.54
CLDND1-201ENST00000341181 UPF2Q9HAU5 1272 aaKnown RBP24.69■■□□□ 1.54
CLDND1-201ENST00000341181 EIF6P56537 245 aaKnown RBP24.69■■□□□ 1.54
CLDND1-201ENST00000341181 SDR42E1Q8WUS8 393 aa24.69■■□□□ 1.54
CLDND1-201ENST00000341181 MAP4K1Q92918 833 aa24.69■■□□□ 1.54
CLDND1-201ENST00000341181 GJA3Q9Y6H8 435 aa24.69■■□□□ 1.54
CLDND1-201ENST00000341181 MYO3BQ8WXR4 1341 aa24.68■■□□□ 1.54
CLDND1-201ENST00000341181 CRKP46108 304 aa24.68■■□□□ 1.54
CLDND1-201ENST00000341181 EPB41L4AQ9HCS5 686 aaPredicted RBP24.68■■□□□ 1.54
CLDND1-201ENST00000341181 PALD1Q9ULE6 856 aa24.68■■□□□ 1.54
CLDND1-201ENST00000341181 RBM8AQ9Y5S9 174 aaKnown RBP24.68■■□□□ 1.54
CLDND1-201ENST00000341181 IGSF3O75054 1194 aa24.67■■□□□ 1.54
CLDND1-201ENST00000341181 TEKT1Q969V4 418 aa24.67■■□□□ 1.54
CLDND1-201ENST00000341181 FAM163AQ96GL9 167 aaPredicted RBP24.67■■□□□ 1.54
CLDND1-201ENST00000341181 GPR75-ASB3A0A0A6YYF3 556 aa24.67■■□□□ 1.54
CLDND1-201ENST00000341181 TNIP1Q15025 636 aa24.67■■□□□ 1.54
CLDND1-201ENST00000341181 TMED8Q6PL24 325 aaPredicted RBP24.67■■□□□ 1.54
CLDND1-201ENST00000341181 SH3RF3Q8TEJ3 882 aaPredicted RBP24.67■■□□□ 1.54
CLDND1-201ENST00000341181 SLC4A4Q9Y6R1 1079 aa24.66■■□□□ 1.54
CLDND1-201ENST00000341181 GRIN3BO60391 1043 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms