RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 C16orf45Q96MC5 204 aaPredicted RBP14.67□□□□□ -0.06
DNMT1-201ENST00000340748 CTAGE1Q96RT6 745 aa14.67□□□□□ -0.06
DNMT1-201ENST00000340748 MCM9Q9NXL9 1143 aa14.67□□□□□ -0.06
DNMT1-201ENST00000340748 HOXB7P09629 217 aa14.67□□□□□ -0.06
DNMT1-201ENST00000340748 CHMLP26374 656 aa14.67□□□□□ -0.06
DNMT1-201ENST00000340748 RAB11FIP4Q86YS3 637 aa14.67□□□□□ -0.06
DNMT1-201ENST00000340748 PRIMPOLQ96LW4 560 aa14.67□□□□□ -0.06
DNMT1-201ENST00000340748 TRMT1Q9NXH9 659 aaKnown RBP14.67□□□□□ -0.06
DNMT1-201ENST00000340748 SLC9C2Q5TAH2 1124 aa14.67□□□□□ -0.06
DNMT1-201ENST00000340748 TTC6Q86TZ1 520 aa14.67□□□□□ -0.06
DNMT1-201ENST00000340748 CALM1P0DP23 149 aa14.66□□□□□ -0.06
DNMT1-201ENST00000340748 CALM2P0DP24 149 aa14.66□□□□□ -0.06
DNMT1-201ENST00000340748 CALM3P0DP25 149 aa14.66□□□□□ -0.06
DNMT1-201ENST00000340748 GTF2IP78347 998 aa14.66□□□□□ -0.06
DNMT1-201ENST00000340748 CCDC40Q4G0X9 1142 aa14.66□□□□□ -0.06
DNMT1-201ENST00000340748 TDRD12Q587J7 1177 aaKnown RBP14.66□□□□□ -0.06
DNMT1-201ENST00000340748 CREB3L3Q68CJ9 461 aa14.66□□□□□ -0.06
DNMT1-201ENST00000340748 TAX1BP1Q86VP1 789 aa14.66□□□□□ -0.06
DNMT1-201ENST00000340748 SSR1P43307 286 aaKnown RBP14.66□□□□□ -0.06
DNMT1-201ENST00000340748 RTL9Q8NET4 1388 aa14.66□□□□□ -0.06
DNMT1-201ENST00000340748 PRC1O43663 620 aa14.66□□□□□ -0.06
DNMT1-201ENST00000340748 USP26Q9BXU7 913 aa14.66□□□□□ -0.06
DNMT1-201ENST00000340748 AOX1Q06278 1338 aa14.66□□□□□ -0.06
DNMT1-201ENST00000340748 TRAF1Q13077 416 aa14.66□□□□□ -0.06
DNMT1-201ENST00000340748 PLXNC1O60486 1568 aa14.66□□□□□ -0.06
DNMT1-201ENST00000340748 PRR36Q9H6K5 1346 aa14.65□□□□□ -0.06
DNMT1-201ENST00000340748 BLMP54132 1417 aaPredicted RBP14.65□□□□□ -0.06
DNMT1-201ENST00000340748 LUZP1Q86V48 1076 aa14.65□□□□□ -0.06
DNMT1-201ENST00000340748 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.65□□□□□ -0.061e-7■■■□□ 18.1
DNMT1-201ENST00000340748 CLTCQ00610 1675 aaKnown RBP14.65□□□□□ -0.06
DNMT1-201ENST00000340748 TAF5LO75529 589 aa14.65□□□□□ -0.06
DNMT1-201ENST00000340748 AK2P54819 239 aa14.65□□□□□ -0.06
DNMT1-201ENST00000340748 ANO6Q4KMQ2 910 aa14.65□□□□□ -0.06
DNMT1-201ENST00000340748 RUFY3Q7L099 469 aa14.65□□□□□ -0.06
DNMT1-201ENST00000340748 CCDC125Q86Z20 511 aa14.65□□□□□ -0.06
DNMT1-201ENST00000340748 EHBP1Q8NDI1 1231 aa14.65□□□□□ -0.06
DNMT1-201ENST00000340748 GPBP1L1Q9HC44 474 aaPredicted RBP14.65□□□□□ -0.06
DNMT1-201ENST00000340748 NOD1Q9Y239 953 aa14.65□□□□□ -0.06
DNMT1-201ENST00000340748 USP6P35125 1406 aa14.65□□□□□ -0.06
DNMT1-201ENST00000340748 MIGA1Q8NAN2 632 aa14.65□□□□□ -0.06
DNMT1-201ENST00000340748 LRRC2Q9BYS8 371 aa14.65□□□□□ -0.06
DNMT1-201ENST00000340748 EXOC1Q9NV70 894 aa14.65□□□□□ -0.06
DNMT1-201ENST00000340748 GCC2Q8IWJ2 1684 aa14.65□□□□□ -0.06
DNMT1-201ENST00000340748 ATP2B4P23634 1241 aa14.65□□□□□ -0.06
DNMT1-201ENST00000340748 IRX3P78415 501 aaPredicted RBP14.65□□□□□ -0.06
DNMT1-201ENST00000340748 WDR66Q8TBY9 1149 aa14.65□□□□□ -0.06
DNMT1-201ENST00000340748 PANK2Q9BZ23 570 aa14.65□□□□□ -0.06
DNMT1-201ENST00000340748 TAOK3Q9H2K8 898 aa14.65□□□□□ -0.06
DNMT1-201ENST00000340748 SRP68Q9UHB9 627 aaKnown RBP14.65□□□□□ -0.06
DNMT1-201ENST00000340748 SAMM50Q9Y512 469 aa14.65□□□□□ -0.06
DNMT1-201ENST00000340748 SPAG1Q07617 926 aa14.64□□□□□ -0.07
DNMT1-201ENST00000340748 SAP30BPQ9UHR5 308 aaKnown RBP14.64□□□□□ -0.07
DNMT1-201ENST00000340748 IDEP14735 1019 aa14.64□□□□□ -0.07
DNMT1-201ENST00000340748 TCP10Q12799 353 aa14.64□□□□□ -0.07
DNMT1-201ENST00000340748 NAA15Q9BXJ9 866 aaKnown RBP14.64□□□□□ -0.07
DNMT1-201ENST00000340748 TFCP2Q12800 502 aa14.64□□□□□ -0.07
DNMT1-201ENST00000340748 CEP135Q66GS9 1140 aa14.64□□□□□ -0.07
DNMT1-201ENST00000340748 DEFB132Q7Z7B7 95 aa14.64□□□□□ -0.07
DNMT1-201ENST00000340748 HELLSQ9NRZ9 838 aa14.64□□□□□ -0.07
DNMT1-201ENST00000340748 RTKN2Q8IZC4 609 aa14.64□□□□□ -0.07
DNMT1-201ENST00000340748 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.64□□□□□ -0.07
DNMT1-201ENST00000340748 ZBTB1Q9Y2K1 713 aa14.64□□□□□ -0.07
DNMT1-201ENST00000340748 OVOS2A0A0G2JMS6 1433 aa14.64□□□□□ -0.07
DNMT1-201ENST00000340748 OVOS2A0A0J9YW53 1432 aa14.64□□□□□ -0.07
DNMT1-201ENST00000340748 OVOS2Q6IE36 1432 aa14.64□□□□□ -0.07
DNMT1-201ENST00000340748 DNM1Q05193 864 aaKnown RBP14.63□□□□□ -0.07
DNMT1-201ENST00000340748 MAGEB6Q8N7X4 407 aa14.63□□□□□ -0.07
DNMT1-201ENST00000340748 ERMNQ8TAM6 284 aa14.63□□□□□ -0.07
DNMT1-201ENST00000340748 TCEANC2Q96MN5 208 aa14.63□□□□□ -0.07
DNMT1-201ENST00000340748 UBASH3AP57075 661 aa14.63□□□□□ -0.07
DNMT1-201ENST00000340748 PUM3Q15397 648 aaKnown RBP14.63□□□□□ -0.07
DNMT1-201ENST00000340748 PIGBQ92521 554 aa14.63□□□□□ -0.07
DNMT1-201ENST00000340748 ARHGEF40Q8TER5 1519 aa14.63□□□□□ -0.07
DNMT1-201ENST00000340748 USP8P40818 1118 aa14.63□□□□□ -0.07
DNMT1-201ENST00000340748 DHX32Q7L7V1 743 aaKnown RBP14.63□□□□□ -0.07
DNMT1-201ENST00000340748 ANKRD62A6NC57 917 aa14.63□□□□□ -0.07
DNMT1-201ENST00000340748 TAF3Q5VWG9 929 aa14.63□□□□□ -0.07
DNMT1-201ENST00000340748 TRIM47Q96LD4 638 aa14.63□□□□□ -0.07
DNMT1-201ENST00000340748 BICC1Q9H694 974 aaKnown RBP14.63□□□□□ -0.07
DNMT1-201ENST00000340748 DACT1Q9NYF0 836 aa14.63□□□□□ -0.07
DNMT1-201ENST00000340748 SHTN1A0MZ66 631 aa14.63□□□□□ -0.07
DNMT1-201ENST00000340748 C21orf2O43822 256 aa14.63□□□□□ -0.07
DNMT1-201ENST00000340748 ATL3Q6DD88 541 aa14.63□□□□□ -0.07
DNMT1-201ENST00000340748 FBXO3Q9UK99 471 aa14.63□□□□□ -0.07
DNMT1-201ENST00000340748 GLI2P10070 1586 aa14.63□□□□□ -0.07
DNMT1-201ENST00000340748 N4BP3O15049 544 aa14.62□□□□□ -0.07
DNMT1-201ENST00000340748 TUBB4AP04350 444 aa14.62□□□□□ -0.07
DNMT1-201ENST00000340748 LIG1P18858 919 aa14.62□□□□□ -0.07
DNMT1-201ENST00000340748 IL6STP40189 918 aaPredicted RBP14.62□□□□□ -0.07
DNMT1-201ENST00000340748 RRAGBQ5VZM2 374 aa14.62□□□□□ -0.07
DNMT1-201ENST00000340748 RTL1A6NKG5 1358 aa14.62□□□□□ -0.07
DNMT1-201ENST00000340748 DYNC1I1O14576 645 aa14.62□□□□□ -0.07
DNMT1-201ENST00000340748 STAT6P42226 847 aa14.62□□□□□ -0.07
DNMT1-201ENST00000340748 BRAPQ7Z569 592 aa14.62□□□□□ -0.07
DNMT1-201ENST00000340748 TBC1D22AQ8WUA7 517 aa14.62□□□□□ -0.07
DNMT1-201ENST00000340748 SPTLC2O15270 562 aa14.62□□□□□ -0.07
DNMT1-201ENST00000340748 ZYXQ15942 572 aaKnown RBP14.62□□□□□ -0.07
DNMT1-201ENST00000340748 DCAF15Q66K64 600 aa14.62□□□□□ -0.07
DNMT1-201ENST00000340748 TTF2Q9UNY4 1162 aaKnown RBP14.62□□□□□ -0.07
DNMT1-201ENST00000340748 EZRP15311 586 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms