RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 SEC62Q99442 399 aaKnown RBP16.86■□□□□ 0.29
RRP1B-201ENST00000340648 B4E1Z4 1266 aa16.86■□□□□ 0.29
RRP1B-201ENST00000340648 KRT86O43790 486 aa16.86■□□□□ 0.29
RRP1B-201ENST00000340648 AMPD3Q01432 767 aa16.86■□□□□ 0.29
RRP1B-201ENST00000340648 TDRD7Q8NHU6 1098 aaKnown RBP16.86■□□□□ 0.29
RRP1B-201ENST00000340648 KIAA1468Q9P260 1216 aa16.86■□□□□ 0.29
RRP1B-201ENST00000340648 ZDHHC9Q9Y397 364 aa16.86■□□□□ 0.29
RRP1B-201ENST00000340648 ARHGEF10O15013 1369 aa16.85■□□□□ 0.29
RRP1B-201ENST00000340648 NOP2P46087 812 aaKnown RBP16.85■□□□□ 0.29
RRP1B-201ENST00000340648 METTL22Q9BUU2 404 aaPredicted RBP16.85■□□□□ 0.29
RRP1B-201ENST00000340648 CABP5Q9NP86 173 aa16.85■□□□□ 0.29
RRP1B-201ENST00000340648 NFE2L3Q9Y4A8 694 aa16.85■□□□□ 0.29
RRP1B-201ENST00000340648 A0A087WWV3 80 aa16.85■□□□□ 0.29
RRP1B-201ENST00000340648 PSMA7O14818 248 aa16.85■□□□□ 0.29
RRP1B-201ENST00000340648 KCNQ3O43525 872 aa16.85■□□□□ 0.29
RRP1B-201ENST00000340648 RAB34Q9BZG1 259 aa16.85■□□□□ 0.29
RRP1B-201ENST00000340648 CYP7A1P22680 504 aa16.85■□□□□ 0.29
RRP1B-201ENST00000340648 TTC31Q49AM3 519 aaPredicted RBP16.85■□□□□ 0.29
RRP1B-201ENST00000340648 KAT14Q9H8E8 782 aa16.85■□□□□ 0.29
RRP1B-201ENST00000340648 POLR2DO15514 142 aaKnown RBP16.85■□□□□ 0.29
RRP1B-201ENST00000340648 VPS36Q86VN1 386 aa16.85■□□□□ 0.29
RRP1B-201ENST00000340648 KRT83P78385 493 aa16.84■□□□□ 0.29
RRP1B-201ENST00000340648 VAT1LQ9HCJ6 419 aa16.84■□□□□ 0.29
RRP1B-201ENST00000340648 VGLL3A8MV65 326 aa16.84■□□□□ 0.29
RRP1B-201ENST00000340648 E7EWF7 191 aa16.84■□□□□ 0.29
RRP1B-201ENST00000340648 ATP2C2O75185 946 aa16.84■□□□□ 0.29
RRP1B-201ENST00000340648 KIF5AQ12840 1032 aa16.84■□□□□ 0.29
RRP1B-201ENST00000340648 CLASP1Q7Z460 1538 aa16.84■□□□□ 0.29
RRP1B-201ENST00000340648 TUBB4BP68371 445 aa16.84■□□□□ 0.29
RRP1B-201ENST00000340648 BEND3Q5T5X7 828 aa16.84■□□□□ 0.29
RRP1B-201ENST00000340648 ADALQ6DHV7 355 aa16.84■□□□□ 0.29
RRP1B-201ENST00000340648 TRMT44Q8IYL2 757 aaKnown RBP16.84■□□□□ 0.29
RRP1B-201ENST00000340648 PHKBQ93100 1093 aa16.84■□□□□ 0.29
RRP1B-201ENST00000340648 ZNF594Q96JF6 807 aaPredicted RBP16.84■□□□□ 0.29
RRP1B-201ENST00000340648 TACC1O75410 805 aa16.84■□□□□ 0.29
RRP1B-201ENST00000340648 PNOCQ13519 176 aa16.84■□□□□ 0.29
RRP1B-201ENST00000340648 HELBQ8NG08 1087 aaPredicted RBP16.84■□□□□ 0.29
RRP1B-201ENST00000340648 VPS16Q9H269 839 aa16.83■□□□□ 0.29
RRP1B-201ENST00000340648 EBAG9O00559 213 aa16.83■□□□□ 0.28
RRP1B-201ENST00000340648 SEPT7Q16181 437 aaKnown RBP16.83■□□□□ 0.28
RRP1B-201ENST00000340648 LUC7L2Q9Y383 392 aaKnown RBP16.83■□□□□ 0.28
RRP1B-201ENST00000340648 MAP2K1Q02750 393 aaPredicted RBP16.83■□□□□ 0.28
RRP1B-201ENST00000340648 GCKRQ14397 625 aa16.83■□□□□ 0.28
RRP1B-201ENST00000340648 CLEC17AQ6ZS10 378 aa16.83■□□□□ 0.28
RRP1B-201ENST00000340648 NAPGQ99747 312 aaPredicted RBP16.83■□□□□ 0.28
RRP1B-201ENST00000340648 EYA2O00167 538 aa16.83■□□□□ 0.28
RRP1B-201ENST00000340648 KRT2P35908 639 aa16.83■□□□□ 0.28
RRP1B-201ENST00000340648 CCDC122Q5T0U0 273 aa16.83■□□□□ 0.28
RRP1B-201ENST00000340648 ZNF790Q6PG37 636 aa16.83■□□□□ 0.28
RRP1B-201ENST00000340648 C11orf57Q6ZUT1 292 aaPredicted RBP16.83■□□□□ 0.28
RRP1B-201ENST00000340648 MIGA1Q8NAN2 632 aa16.83■□□□□ 0.28
RRP1B-201ENST00000340648 ATRIPQ8WXE1 791 aa16.83■□□□□ 0.28
RRP1B-201ENST00000340648 MYL10Q9BUA6 226 aa16.83■□□□□ 0.28
RRP1B-201ENST00000340648 ADKP55263 362 aaKnown RBP16.82■□□□□ 0.28
RRP1B-201ENST00000340648 UTP14CQ5TAP6 766 aaKnown RBP16.82■□□□□ 0.28
RRP1B-201ENST00000340648 MYSM1Q5VVJ2 828 aa16.82■□□□□ 0.28
RRP1B-201ENST00000340648 PLCD3Q8N3E9 789 aa16.82■□□□□ 0.28
RRP1B-201ENST00000340648 CCDC42Q96M95 316 aa16.82■□□□□ 0.28
RRP1B-201ENST00000340648 ANGEL1Q9UNK9 670 aaKnown RBP16.82■□□□□ 0.28
RRP1B-201ENST00000340648 CTNND2Q9UQB3 1225 aa16.82■□□□□ 0.28
RRP1B-201ENST00000340648 MYO5CQ9NQX4 1742 aa16.82■□□□□ 0.28
RRP1B-201ENST00000340648 PFKFB1P16118 471 aa16.82■□□□□ 0.28
RRP1B-201ENST00000340648 ATP5JP18859 108 aa16.82■□□□□ 0.28
RRP1B-201ENST00000340648 PRPF4BQ13523 1007 aaKnown RBP16.82■□□□□ 0.28
RRP1B-201ENST00000340648 MAGEB6Q8N7X4 407 aa16.82■□□□□ 0.28
RRP1B-201ENST00000340648 MAP4K1Q92918 833 aa16.82■□□□□ 0.28
RRP1B-201ENST00000340648 ZNF287Q9HBT7 754 aa16.82■□□□□ 0.28
RRP1B-201ENST00000340648 OPA1O60313 960 aa16.82■□□□□ 0.28
RRP1B-201ENST00000340648 MCM7P33993 719 aa16.82■□□□□ 0.28
RRP1B-201ENST00000340648 ZNF76P36508 570 aa16.82■□□□□ 0.28
RRP1B-201ENST00000340648 LONRF3Q496Y0 759 aa16.82■□□□□ 0.28
RRP1B-201ENST00000340648 KRT40Q6A162 431 aa16.82■□□□□ 0.28
RRP1B-201ENST00000340648 MMRN2Q9H8L6 949 aa16.82■□□□□ 0.28
RRP1B-201ENST00000340648 VWA3AA6NCI4 1184 aa16.81■□□□□ 0.28
RRP1B-201ENST00000340648 CUTAO60888 179 aa16.81■□□□□ 0.28
RRP1B-201ENST00000340648 GCP02774 474 aa16.81■□□□□ 0.28
RRP1B-201ENST00000340648 ASIC1P78348 528 aa16.81■□□□□ 0.28
RRP1B-201ENST00000340648 PDE4BQ07343 736 aa16.81■□□□□ 0.28
RRP1B-201ENST00000340648 TCERG1LQ5VWI1 586 aa16.81■□□□□ 0.28
RRP1B-201ENST00000340648 ETF1P62495 437 aaKnown RBP16.81■□□□□ 0.28
RRP1B-201ENST00000340648 SMC1AQ14683 1233 aaKnown RBP16.81■□□□□ 0.28
RRP1B-201ENST00000340648 PCDHA7Q9UN72 937 aa16.81■□□□□ 0.28
RRP1B-201ENST00000340648 RILPL1Q5EBL4 403 aa16.81■□□□□ 0.28
RRP1B-201ENST00000340648 GPAA1O43292 621 aa16.81■□□□□ 0.28
RRP1B-201ENST00000340648 PPP1R12BO60237 982 aaPredicted RBP16.81■□□□□ 0.28
RRP1B-201ENST00000340648 TUBBP07437 444 aa16.81■□□□□ 0.28
RRP1B-201ENST00000340648 DIS3L2Q8IYB7 885 aaKnown RBP16.81■□□□□ 0.28
RRP1B-201ENST00000340648 NEK11Q8NG66 645 aa16.81■□□□□ 0.28
RRP1B-201ENST00000340648 PLIN2Q99541 437 aa16.81■□□□□ 0.28
RRP1B-201ENST00000340648 ZEB2O60315 1214 aa16.8■□□□□ 0.28
RRP1B-201ENST00000340648 PFKFB2O60825 505 aa16.8■□□□□ 0.28
RRP1B-201ENST00000340648 ZNF174Q15697 407 aa16.8■□□□□ 0.28
RRP1B-201ENST00000340648 NBPF6Q5VWK0 638 aa16.8■□□□□ 0.28
RRP1B-201ENST00000340648 NBPF4Q96M43 638 aa16.8■□□□□ 0.28
RRP1B-201ENST00000340648 MACROD2A1Z1Q3 448 aa16.8■□□□□ 0.28
RRP1B-201ENST00000340648 NDUFA8P51970 172 aa16.8■□□□□ 0.28
RRP1B-201ENST00000340648 IQUBQ8NA54 791 aa16.8■□□□□ 0.28
RRP1B-201ENST00000340648 MLKLQ8NB16 471 aa16.8■□□□□ 0.28
RRP1B-201ENST00000340648 DESI2Q9BSY9 194 aa16.8■□□□□ 0.28
RRP1B-201ENST00000340648 SCRN1Q12765 414 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms