RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 SERPINA10Q9UK55 444 aa15.73■□□□□ 0.11
SRSF3-201ENST00000339436 CDK5RAP2Q96SN8 1893 aa15.73■□□□□ 0.11
SRSF3-201ENST00000339436 ASTN2O75129 1339 aaPredicted RBP15.72■□□□□ 0.11
SRSF3-201ENST00000339436 WNT10BO00744 389 aa15.72■□□□□ 0.11
SRSF3-201ENST00000339436 LDHBP07195 334 aaKnown RBP15.72■□□□□ 0.11
SRSF3-201ENST00000339436 NBPF9Q3BBW0 867 aa15.72■□□□□ 0.11
SRSF3-201ENST00000339436 CFAP100Q494V2 611 aa15.72■□□□□ 0.11
SRSF3-201ENST00000339436 SMC5Q8IY18 1101 aa15.72■□□□□ 0.11
SRSF3-201ENST00000339436 GGA3Q9NZ52 723 aa15.72■□□□□ 0.11
SRSF3-201ENST00000339436 SPDYE2BA6NHP3 402 aa15.71■□□□□ 0.11
SRSF3-201ENST00000339436 IGHDP01880 384 aa15.71■□□□□ 0.11
SRSF3-201ENST00000339436 SPDYE6P0CI01 402 aa15.71■□□□□ 0.11
SRSF3-201ENST00000339436 CRKP46108 304 aa15.71■□□□□ 0.11
SRSF3-201ENST00000339436 HDLBPQ00341 1268 aaKnown RBP15.71■□□□□ 0.11
SRSF3-201ENST00000339436 DLGAP5Q15398 846 aa15.71■□□□□ 0.11
SRSF3-201ENST00000339436 SNRKQ9NRH2 765 aa15.71■□□□□ 0.11
SRSF3-201ENST00000339436 ABCF2Q9UG63 623 aa15.71■□□□□ 0.11
SRSF3-201ENST00000339436 PCDHAC2Q9Y5I4 1007 aa15.71■□□□□ 0.11
SRSF3-201ENST00000339436 FOCADQ5VW36 1801 aa15.71■□□□□ 0.1
SRSF3-201ENST00000339436 AK9Q5TCS8 1911 aa15.7■□□□□ 0.1
SRSF3-201ENST00000339436 PITPNM2Q9BZ72 1349 aa15.7■□□□□ 0.1
SRSF3-201ENST00000339436 CNTROBQ8N137 903 aa15.7■□□□□ 0.1
SRSF3-201ENST00000339436 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.7■□□□□ 0.1
SRSF3-201ENST00000339436 TEKT1Q969V4 418 aa15.7■□□□□ 0.1
SRSF3-201ENST00000339436 AOX1Q06278 1338 aa15.7■□□□□ 0.1
SRSF3-201ENST00000339436 PASKQ96RG2 1323 aa15.7■□□□□ 0.1
SRSF3-201ENST00000339436 ZAP70P43403 619 aa15.69■□□□□ 0.1
SRSF3-201ENST00000339436 ANGEL2Q5VTE6 544 aaKnown RBP15.69■□□□□ 0.1
SRSF3-201ENST00000339436 SPTY2D1Q68D10 685 aaPredicted RBP15.69■□□□□ 0.1
SRSF3-201ENST00000339436 TBC1D9Q6ZT07 1266 aa15.69■□□□□ 0.1
SRSF3-201ENST00000339436 DZIP1Q86YF9 867 aaKnown RBP15.69■□□□□ 0.1
SRSF3-201ENST00000339436 ITGBL1O95965 494 aaPredicted RBP15.68■□□□□ 0.1
SRSF3-201ENST00000339436 CYP2E1P05181 493 aaPredicted RBP15.68■□□□□ 0.1
SRSF3-201ENST00000339436 RBM5P52756 815 aaKnown RBP eCLIP15.68■□□□□ 0.1
SRSF3-201ENST00000339436 DIXDC1Q155Q3 683 aa15.68■□□□□ 0.1
SRSF3-201ENST00000339436 ANKRD45Q5TZF3 282 aa15.68■□□□□ 0.1
SRSF3-201ENST00000339436 HHIPL2Q6UWX4 724 aa15.68■□□□□ 0.1
SRSF3-201ENST00000339436 ERICH6Q7L0X2 663 aa15.68■□□□□ 0.1
SRSF3-201ENST00000339436 PRMT6Q96LA8 375 aaPredicted RBP15.68■□□□□ 0.1
SRSF3-201ENST00000339436 ZDHHC15Q96MV8 337 aa15.68■□□□□ 0.1
SRSF3-201ENST00000339436 MRIQ9BWK5 157 aa15.68■□□□□ 0.1
SRSF3-201ENST00000339436 PCNTO95613 3336 aa15.68■□□□□ 0.1
SRSF3-201ENST00000339436 ATP5JP18859 108 aa15.68■□□□□ 0.1
SRSF3-201ENST00000339436 KRT26Q7Z3Y9 468 aa15.68■□□□□ 0.1
SRSF3-201ENST00000339436 DCPSQ96C86 337 aaKnown RBP15.68■□□□□ 0.1
SRSF3-201ENST00000339436 GPATCH3Q96I76 525 aa15.68■□□□□ 0.1
SRSF3-201ENST00000339436 GLIS2Q9BZE0 524 aaPredicted RBP15.68■□□□□ 0.1
SRSF3-201ENST00000339436 ECHDC1Q9NTX5 307 aa15.68■□□□□ 0.1
SRSF3-201ENST00000339436 ZBTB47Q9UFB7 747 aaPredicted RBP15.68■□□□□ 0.1
SRSF3-201ENST00000339436 DAGLAQ9Y4D2 1042 aa15.68■□□□□ 0.1
SRSF3-201ENST00000339436 NDUFB9Q9Y6M9 179 aa15.68■□□□□ 0.1
SRSF3-201ENST00000339436 GAKO14976 1311 aa15.67■□□□□ 0.1
SRSF3-201ENST00000339436 MYO1BO43795 1136 aa15.67■□□□□ 0.1
SRSF3-201ENST00000339436 MECOMQ03112 1051 aa15.67■□□□□ 0.1
SRSF3-201ENST00000339436 CDC37L1Q7L3B6 337 aa15.67■□□□□ 0.1
SRSF3-201ENST00000339436 APOBEC3FQ8IUX4 373 aaKnown RBP15.67■□□□□ 0.1
SRSF3-201ENST00000339436 SULF1Q8IWU6 871 aa15.67■□□□□ 0.1
SRSF3-201ENST00000339436 OTUD7AQ8TE49 926 aaPredicted RBP15.67■□□□□ 0.1
SRSF3-201ENST00000339436 ZNF384Q8TF68 577 aa15.67■□□□□ 0.1
SRSF3-201ENST00000339436 PIH1D3Q9NQM4 214 aaKnown RBP15.67■□□□□ 0.1
SRSF3-201ENST00000339436 LRP2BPQ9P2M1 347 aa15.67■□□□□ 0.1
SRSF3-201ENST00000339436 SALL3Q9BXA9 1300 aa15.66■□□□□ 0.1
SRSF3-201ENST00000339436 ADM5C9JUS6 153 aa15.66■□□□□ 0.1
SRSF3-201ENST00000339436 TRAF5O00463 557 aa15.66■□□□□ 0.1
SRSF3-201ENST00000339436 NEFLP07196 543 aa15.66■□□□□ 0.1
SRSF3-201ENST00000339436 SPDYE2Q495Y8 402 aa15.66■□□□□ 0.1
SRSF3-201ENST00000339436 TSHZ3Q63HK5 1081 aa15.66■□□□□ 0.1
SRSF3-201ENST00000339436 APOBEC3HQ6NTF7 200 aaKnown RBP15.66■□□□□ 0.1
SRSF3-201ENST00000339436 NSUN4Q96CB9 384 aaKnown RBP15.66■□□□□ 0.1
SRSF3-201ENST00000339436 RAI14Q9P0K7 980 aa15.66■□□□□ 0.1
SRSF3-201ENST00000339436 MROH7-TTC4A0A0A0MT08 1334 aa15.66■□□□□ 0.1
SRSF3-201ENST00000339436 TTC41PQ6P2S7 1318 aa15.66■□□□□ 0.1
SRSF3-201ENST00000339436 CLRN2A0PK11 232 aa15.65■□□□□ 0.1
SRSF3-201ENST00000339436 IGSF3O75054 1194 aa15.65■□□□□ 0.1
SRSF3-201ENST00000339436 MX1P20591 662 aa15.65■□□□□ 0.1
SRSF3-201ENST00000339436 NUCB1Q02818 461 aa15.65■□□□□ 0.1
SRSF3-201ENST00000339436 B4GALNT3Q6L9W6 998 aa15.65■□□□□ 0.1
SRSF3-201ENST00000339436 SLF2Q8IX21 1173 aa15.65■□□□□ 0.1
SRSF3-201ENST00000339436 DNAJC2Q99543 621 aaKnown RBP15.65■□□□□ 0.1
SRSF3-201ENST00000339436 HAUS7Q99871 368 aa15.65■□□□□ 0.1
SRSF3-201ENST00000339436 LNPKQ9C0E8 428 aa15.65■□□□□ 0.1
SRSF3-201ENST00000339436 BOLA2Q9H3K6 86 aa15.65■□□□□ 0.1
SRSF3-201ENST00000339436 ANTXR1Q9H6X2 564 aa15.65■□□□□ 0.1
SRSF3-201ENST00000339436 PAPPA2Q9BXP8 1791 aa15.64■□□□□ 0.09
SRSF3-201ENST00000339436 TTF1Q15361 905 aaPredicted RBP15.64■□□□□ 0.09
SRSF3-201ENST00000339436 USP48Q86UV5 1035 aa15.64■□□□□ 0.09
SRSF3-201ENST00000339436 TDRD3Q9H7E2 651 aaKnown RBP15.64■□□□□ 0.09
SRSF3-201ENST00000339436 ZNF70Q9UC06 446 aaPredicted RBP15.64■□□□□ 0.09
SRSF3-201ENST00000339436 SCAF8Q9UPN6 1271 aaKnown RBP15.64■□□□□ 0.09
SRSF3-201ENST00000339436 RFX7Q2KHR2 1363 aa15.64■□□□□ 0.09
SRSF3-201ENST00000339436 OTOFQ9HC10 1997 aa15.64■□□□□ 0.09
SRSF3-201ENST00000339436 GOLIM4O00461 696 aa15.63■□□□□ 0.09
SRSF3-201ENST00000339436 IDH1O75874 414 aaKnown RBP15.63■□□□□ 0.09
SRSF3-201ENST00000339436 HSPA6P17066 643 aa15.63■□□□□ 0.09
SRSF3-201ENST00000339436 APLP1P51693 650 aa15.63■□□□□ 0.09
SRSF3-201ENST00000339436 GSTO1P78417 241 aa15.63■□□□□ 0.09
SRSF3-201ENST00000339436 FMR1Q06787 632 aaKnown RBP eCLIP15.63■□□□□ 0.09
SRSF3-201ENST00000339436 CHD1LQ86WJ1 897 aa15.63■□□□□ 0.09
SRSF3-201ENST00000339436 FAM163AQ96GL9 167 aaPredicted RBP15.63■□□□□ 0.09
SRSF3-201ENST00000339436 VEZTQ9HBM0 779 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms