RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 RIC1Q4ADV7 1423 aa21.92■■□□□ 1.1
PSPC1-201ENST00000338910 GOLGA6L4A6NEF3 574 aa21.92■■□□□ 1.1
PSPC1-201ENST00000338910 M0R2C6 588 aa21.92■■□□□ 1.1
PSPC1-201ENST00000338910 PARP10Q53GL7 1025 aa21.92■■□□□ 1.1
PSPC1-201ENST00000338910 HELBQ8NG08 1087 aaPredicted RBP21.92■■□□□ 1.1
PSPC1-201ENST00000338910 LEO1Q8WVC0 666 aaPredicted RBP21.92■■□□□ 1.1
PSPC1-201ENST00000338910 A0A0G2JLW4 131 aa21.91■■□□□ 1.1
PSPC1-201ENST00000338910 WASHC4Q2M389 1173 aa21.91■■□□□ 1.1
PSPC1-201ENST00000338910 DNAJC25Q9H1X3 360 aa21.91■■□□□ 1.1
PSPC1-201ENST00000338910 ALDH8A1Q9H2A2 487 aaPredicted RBP21.91■■□□□ 1.1
PSPC1-201ENST00000338910 TERF2Q15554 542 aa21.91■■□□□ 1.1
PSPC1-201ENST00000338910 STOX1Q6ZVD7 989 aa21.91■■□□□ 1.1
PSPC1-201ENST00000338910 KRT222Q8N1A0 295 aa21.91■■□□□ 1.1
PSPC1-201ENST00000338910 ZNF397Q8NF99 534 aaPredicted RBP21.91■■□□□ 1.1
PSPC1-201ENST00000338910 DSCC1Q9BVC3 393 aa21.91■■□□□ 1.1
PSPC1-201ENST00000338910 NR1I2O75469 434 aa21.9■■□□□ 1.1
PSPC1-201ENST00000338910 PDE8BO95263 885 aa21.9■■□□□ 1.1
PSPC1-201ENST00000338910 RBM6P78332 1123 aaKnown RBP21.9■■□□□ 1.1
PSPC1-201ENST00000338910 KMT5BQ4FZB7 885 aa21.9■■□□□ 1.1
PSPC1-201ENST00000338910 LRRC8AQ8IWT6 810 aa21.9■■□□□ 1.1
PSPC1-201ENST00000338910 VGLL2Q8N8G2 317 aa21.9■■□□□ 1.1
PSPC1-201ENST00000338910 LRRC2Q9BYS8 371 aa21.9■■□□□ 1.1
PSPC1-201ENST00000338910 FAM53CQ9NYF3 392 aa21.9■■□□□ 1.1
PSPC1-201ENST00000338910 TFIP11Q9UBB9 837 aaKnown RBP21.9■■□□□ 1.1
PSPC1-201ENST00000338910 NTSR2O95665 410 aa21.9■■□□□ 1.1
PSPC1-201ENST00000338910 CAVIN2O95810 425 aa21.9■■□□□ 1.1
PSPC1-201ENST00000338910 Q6ZUG5 572 aa21.9■■□□□ 1.1
PSPC1-201ENST00000338910 NYAP1Q6ZVC0 841 aa21.9■■□□□ 1.1
PSPC1-201ENST00000338910 TICAM2Q86XR7 235 aa21.9■■□□□ 1.1
PSPC1-201ENST00000338910 MCAMP43121 646 aa21.89■■□□□ 1.1
PSPC1-201ENST00000338910 AK7Q96M32 723 aa21.89■■□□□ 1.1
PSPC1-201ENST00000338910 ZNF652Q9Y2D9 606 aa21.89■■□□□ 1.1
PSPC1-201ENST00000338910 BTAF1O14981 1849 aa21.89■■□□□ 1.1
PSPC1-201ENST00000338910 SARM1Q6SZW1 724 aa21.89■■□□□ 1.09
PSPC1-201ENST00000338910 ZNF592Q92610 1267 aa21.89■■□□□ 1.09
PSPC1-201ENST00000338910 PGBD1Q96JS3 809 aa21.89■■□□□ 1.09
PSPC1-201ENST00000338910 ZNF215Q9UL58 517 aaPredicted RBP21.89■■□□□ 1.09
PSPC1-201ENST00000338910 ZNF831Q5JPB2 1677 aa21.88■■□□□ 1.09
PSPC1-201ENST00000338910 USP27XA6NNY8 438 aa21.88■■□□□ 1.09
PSPC1-201ENST00000338910 SEC31BQ9NQW1 1179 aa21.88■■□□□ 1.09
PSPC1-201ENST00000338910 LRRFIP1Q32MZ4 808 aaKnown RBP21.88■■□□□ 1.09
PSPC1-201ENST00000338910 TTLL5Q6EMB2 1281 aa21.88■■□□□ 1.09
PSPC1-201ENST00000338910 CNTNAP4Q9C0A0 1308 aa21.88■■□□□ 1.09
PSPC1-201ENST00000338910 NEMFO60524 1076 aa21.87■■□□□ 1.09
PSPC1-201ENST00000338910 CLEC4GQ6UXB4 293 aa21.87■■□□□ 1.09
PSPC1-201ENST00000338910 CCNL1Q9UK58 526 aaPredicted RBP21.87■■□□□ 1.09
PSPC1-201ENST00000338910 GTF2E1P29083 439 aaPredicted RBP21.87■■□□□ 1.09
PSPC1-201ENST00000338910 IQCB1Q15051 598 aa21.87■■□□□ 1.09
PSPC1-201ENST00000338910 SEPT12Q8IYM1 358 aa21.87■■□□□ 1.09
PSPC1-201ENST00000338910 MRFAP1L1Q96HT8 127 aa21.87■■□□□ 1.09
PSPC1-201ENST00000338910 SNAP23O00161 211 aa21.86■■□□□ 1.09
PSPC1-201ENST00000338910 ZFYP08048 801 aaPredicted RBP21.86■■□□□ 1.09
PSPC1-201ENST00000338910 HSP90B1P14625 803 aaKnown RBP21.86■■□□□ 1.09
PSPC1-201ENST00000338910 PUS7LQ9H0K6 701 aaKnown RBP21.86■■□□□ 1.09
PSPC1-201ENST00000338910 TMEM51Q9NW97 253 aa21.86■■□□□ 1.09
PSPC1-201ENST00000338910 TRPC5Q9UL62 973 aaPredicted RBP21.86■■□□□ 1.09
PSPC1-201ENST00000338910 ONECUT3O60422 494 aaPredicted RBP21.86■■□□□ 1.09
PSPC1-201ENST00000338910 ARID5BQ14865 1188 aa21.86■■□□□ 1.09
PSPC1-201ENST00000338910 PTPN14Q15678 1187 aa21.86■■□□□ 1.09
PSPC1-201ENST00000338910 BICDL1Q6ZP65 573 aa21.86■■□□□ 1.09
PSPC1-201ENST00000338910 BBXQ8WY36 941 aaPredicted RBP21.86■■□□□ 1.09
PSPC1-201ENST00000338910 BRF1Q92994 677 aa21.86■■□□□ 1.09
PSPC1-201ENST00000338910 MPHOSPH8Q99549 860 aa21.86■■□□□ 1.09
PSPC1-201ENST00000338910 PHKA1P46020 1223 aa21.85■■□□□ 1.09
PSPC1-201ENST00000338910 CCDC102BQ68D86 513 aa21.85■■□□□ 1.09
PSPC1-201ENST00000338910 BICD2Q8TD16 824 aa21.85■■□□□ 1.09
PSPC1-201ENST00000338910 E7EWF7 191 aa21.85■■□□□ 1.09
PSPC1-201ENST00000338910 GNPATO15228 680 aa21.85■■□□□ 1.09
PSPC1-201ENST00000338910 DHX32Q7L7V1 743 aaKnown RBP21.85■■□□□ 1.09
PSPC1-201ENST00000338910 ERO1AQ96HE7 468 aa21.85■■□□□ 1.09
PSPC1-201ENST00000338910 NHSQ6T4R5 1651 aa21.84■■□□□ 1.09
PSPC1-201ENST00000338910 CCDC152Q4G0S7 254 aa21.84■■□□□ 1.09
PSPC1-201ENST00000338910 FBXO38Q6PIJ6 1188 aa21.84■■□□□ 1.09
PSPC1-201ENST00000338910 MROH5Q6ZUA9 1318 aa21.84■■□□□ 1.09
PSPC1-201ENST00000338910 HMGB1P09429 215 aaKnown RBP21.84■■□□□ 1.09
PSPC1-201ENST00000338910 SKILP12757 684 aa21.84■■□□□ 1.09
PSPC1-201ENST00000338910 PUM3Q15397 648 aaKnown RBP21.84■■□□□ 1.09
PSPC1-201ENST00000338910 APPBP2Q92624 585 aa21.84■■□□□ 1.09
PSPC1-201ENST00000338910 DDX60Q8IY21 1712 aaKnown RBP21.83■■□□□ 1.09
PSPC1-201ENST00000338910 RPS6KA4O75676 772 aa21.83■■□□□ 1.09
PSPC1-201ENST00000338910 RC3H1Q5TC82 1133 aaKnown RBP21.83■■□□□ 1.09
PSPC1-201ENST00000338910 CHST3Q7LGC8 479 aa21.83■■□□□ 1.09
PSPC1-201ENST00000338910 SRP68Q9UHB9 627 aaKnown RBP21.83■■□□□ 1.09
PSPC1-201ENST00000338910 BCORQ6W2J9 1755 aa21.83■■□□□ 1.09
PSPC1-201ENST00000338910 ATRNO75882 1429 aa21.83■■□□□ 1.08
PSPC1-201ENST00000338910 SPEF2Q9C093 1822 aa21.83■■□□□ 1.08
PSPC1-201ENST00000338910 GOLGA6L19H0YKK7 550 aa21.82■■□□□ 1.08
PSPC1-201ENST00000338910 FOXP2O15409 715 aa21.82■■□□□ 1.08
PSPC1-201ENST00000338910 HAND2P61296 217 aa21.82■■□□□ 1.08
PSPC1-201ENST00000338910 SLC9C2Q5TAH2 1124 aa21.82■■□□□ 1.08
PSPC1-201ENST00000338910 AMIGO3Q86WK7 504 aa21.82■■□□□ 1.08
PSPC1-201ENST00000338910 LPIN2Q92539 896 aa21.82■■□□□ 1.08
PSPC1-201ENST00000338910 BCL11BQ9C0K0 894 aaPredicted RBP21.82■■□□□ 1.08
PSPC1-201ENST00000338910 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.82■■□□□ 1.08
PSPC1-201ENST00000338910 V9GYY5 206 aaPredicted RBP21.82■■□□□ 1.08
PSPC1-201ENST00000338910 CCDC66A2RUB6 948 aa21.82■■□□□ 1.08
PSPC1-201ENST00000338910 IDH1O75874 414 aaKnown RBP21.82■■□□□ 1.08
PSPC1-201ENST00000338910 CCZ1BP86790 482 aa21.82■■□□□ 1.08
PSPC1-201ENST00000338910 CCZ1P86791 482 aaPredicted RBP21.82■■□□□ 1.08
PSPC1-201ENST00000338910 ERFEQ4G0M1 354 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms