RNA–Protein interactions for RNA: ENST00000335922.9

FGFR1-202, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 4,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-202ENST00000335922 SPTLC2O15270 562 aa16.8■□□□□ 0.28
FGFR1-202ENST00000335922 TSPYL1Q9H0U9 437 aa16.8■□□□□ 0.28
FGFR1-202ENST00000335922 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.8■□□□□ 0.28
FGFR1-202ENST00000335922 MYL10Q9BUA6 226 aa16.8■□□□□ 0.28
FGFR1-202ENST00000335922 PNPLA6Q8IY17 1366 aa16.8■□□□□ 0.28
FGFR1-202ENST00000335922 METAP2P50579 478 aaKnown RBP eCLIP16.8■□□□□ 0.28
FGFR1-202ENST00000335922 DHX8Q14562 1220 aaKnown RBP16.8■□□□□ 0.28
FGFR1-202ENST00000335922 FEZ1Q99689 392 aa16.8■□□□□ 0.28
FGFR1-202ENST00000335922 PDIA4P13667 645 aaKnown RBP16.79■□□□□ 0.28
FGFR1-202ENST00000335922 GRM1Q13255 1194 aa16.79■□□□□ 0.28
FGFR1-202ENST00000335922 ZNF804AQ7Z570 1209 aa16.79■□□□□ 0.28
FGFR1-202ENST00000335922 MAGEB6Q8N7X4 407 aa16.79■□□□□ 0.28
FGFR1-202ENST00000335922 ZNF287Q9HBT7 754 aa16.79■□□□□ 0.28
FGFR1-202ENST00000335922 RIMS1Q86UR5 1692 aaKnown RBP16.79■□□□□ 0.28
FGFR1-202ENST00000335922 IARSP41252 1262 aaKnown RBP16.79■□□□□ 0.28
FGFR1-202ENST00000335922 AFMP43652 599 aa16.79■□□□□ 0.28
FGFR1-202ENST00000335922 STX17P56962 302 aa16.79■□□□□ 0.28
FGFR1-202ENST00000335922 KARSQ15046 597 aaKnown RBP16.79■□□□□ 0.28
FGFR1-202ENST00000335922 PTPRUQ92729 1446 aa16.79■□□□□ 0.28
FGFR1-202ENST00000335922 SMIM5Q71RC9 77 aa16.79■□□□□ 0.28
FGFR1-202ENST00000335922 ZKSCAN3Q9BRR0 538 aa16.79■□□□□ 0.28
FGFR1-202ENST00000335922 TNS3Q68CZ2 1445 aa16.79■□□□□ 0.28
FGFR1-202ENST00000335922 ARHGAP29Q52LW3 1261 aa16.78■□□□□ 0.28
FGFR1-202ENST00000335922 TMEM67Q5HYA8 995 aa16.78■□□□□ 0.28
FGFR1-202ENST00000335922 CACTINQ8WUQ7 758 aaKnown RBP16.78■□□□□ 0.28
FGFR1-202ENST00000335922 SRP68Q9UHB9 627 aaKnown RBP16.78■□□□□ 0.28
FGFR1-202ENST00000335922 QRICH2Q9H0J4 1663 aa16.78■□□□□ 0.28
FGFR1-202ENST00000335922 CBFA2T2O43439 604 aa16.78■□□□□ 0.28
FGFR1-202ENST00000335922 TERF1P54274 439 aa16.78■□□□□ 0.28
FGFR1-202ENST00000335922 FILIP1LQ4L180 1135 aa16.78■□□□□ 0.28
FGFR1-202ENST00000335922 CTCFLQ8NI51 663 aaPredicted RBP16.78■□□□□ 0.28
FGFR1-202ENST00000335922 GJA3Q9Y6H8 435 aa16.78■□□□□ 0.28
FGFR1-202ENST00000335922 H0YIN7 160 aa16.78■□□□□ 0.28
FGFR1-202ENST00000335922 CRNKL1Q9BZJ0 848 aaKnown RBP16.78■□□□□ 0.28
FGFR1-202ENST00000335922 ZNF215Q9UL58 517 aaPredicted RBP16.78■□□□□ 0.28
FGFR1-202ENST00000335922 SLU7O95391 586 aaKnown RBP16.78■□□□□ 0.28
FGFR1-202ENST00000335922 MFSD6Q6ZSS7 791 aa16.78■□□□□ 0.28
FGFR1-202ENST00000335922 KRT222Q8N1A0 295 aa16.78■□□□□ 0.28
FGFR1-202ENST00000335922 SLC12A7Q9Y666 1083 aa16.78■□□□□ 0.28
FGFR1-202ENST00000335922 GSDMDP57764 484 aa16.77■□□□□ 0.28
FGFR1-202ENST00000335922 KIF4BQ2VIQ3 1234 aa16.77■□□□□ 0.28
FGFR1-202ENST00000335922 KIAA1524Q8TCG1 905 aa16.77■□□□□ 0.28
FGFR1-202ENST00000335922 RBM17Q96I25 401 aaKnown RBP16.77■□□□□ 0.28
FGFR1-202ENST00000335922 CLEC11AQ9Y240 323 aa16.77■□□□□ 0.28
FGFR1-202ENST00000335922 AOX1Q06278 1338 aa16.77■□□□□ 0.28
FGFR1-202ENST00000335922 IBSPP21815 317 aaPredicted RBP16.77■□□□□ 0.27
FGFR1-202ENST00000335922 RPS8P62241 208 aaKnown RBP16.77■□□□□ 0.27
FGFR1-202ENST00000335922 NCOA7Q8NI08 942 aa16.77■□□□□ 0.27
FGFR1-202ENST00000335922 CDKL5O76039 1030 aa16.77■□□□□ 0.27
FGFR1-202ENST00000335922 XAGE2Q96GT9 111 aa16.77■□□□□ 0.27
FGFR1-202ENST00000335922 RNF41Q9H4P4 317 aaPredicted RBP16.77■□□□□ 0.27
FGFR1-202ENST00000335922 GJB4Q9NTQ9 266 aa16.77■□□□□ 0.27
FGFR1-202ENST00000335922 CLEC17AQ6ZS10 378 aa16.76■□□□□ 0.27
FGFR1-202ENST00000335922 PHKBQ93100 1093 aa16.76■□□□□ 0.27
FGFR1-202ENST00000335922 GOLGA8FQ08AF8 430 aa16.76■□□□□ 0.27
FGFR1-202ENST00000335922 GOLGA8DPQ0D2H9 430 aa16.76■□□□□ 0.27
FGFR1-202ENST00000335922 C11orf57Q6ZUT1 292 aaPredicted RBP16.76■□□□□ 0.27
FGFR1-202ENST00000335922 SMAP1Q8IYB5 467 aaPredicted RBP16.76■□□□□ 0.27
FGFR1-202ENST00000335922 CCDC47Q96A33 483 aaKnown RBP16.76■□□□□ 0.27
FGFR1-202ENST00000335922 GPHNQ9NQX3 736 aaPredicted RBP16.76■□□□□ 0.27
FGFR1-202ENST00000335922 NEXMIFQ5QGS0 1516 aa16.76■□□□□ 0.27
FGFR1-202ENST00000335922 NEMFO60524 1076 aa16.76■□□□□ 0.27
FGFR1-202ENST00000335922 SASH1O94885 1247 aa16.76■□□□□ 0.27
FGFR1-202ENST00000335922 FAM160A1Q05DH4 1040 aa16.76■□□□□ 0.27
FGFR1-202ENST00000335922 TAF6LQ9Y6J9 622 aa16.76■□□□□ 0.27
FGFR1-202ENST00000335922 ECM2O94769 699 aaPredicted RBP16.75■□□□□ 0.27
FGFR1-202ENST00000335922 CASQ1P31415 396 aa16.75■□□□□ 0.27
FGFR1-202ENST00000335922 CCDC12Q8WUD4 166 aaPredicted RBP16.75■□□□□ 0.27
FGFR1-202ENST00000335922 ANKRD2Q9GZV1 360 aa16.75■□□□□ 0.27
FGFR1-202ENST00000335922 DBNLQ9UJU6 430 aaKnown RBP16.75■□□□□ 0.27
FGFR1-202ENST00000335922 LAMC1P11047 1609 aa16.75■□□□□ 0.27
FGFR1-202ENST00000335922 CCP110O43303 1012 aa16.75■□□□□ 0.27
FGFR1-202ENST00000335922 HIBADHP31937 336 aaKnown RBP16.75■□□□□ 0.27
FGFR1-202ENST00000335922 DPP8Q6V1X1 898 aaPredicted RBP16.75■□□□□ 0.27
FGFR1-202ENST00000335922 MAP4K1Q92918 833 aa16.75■□□□□ 0.27
FGFR1-202ENST00000335922 IQGAP1P46940 1657 aa16.75■□□□□ 0.27
FGFR1-202ENST00000335922 LDHBP07195 334 aaKnown RBP16.75■□□□□ 0.27
FGFR1-202ENST00000335922 CYP21A2P08686 494 aa16.75■□□□□ 0.27
FGFR1-202ENST00000335922 DNA2P51530 1060 aa16.75■□□□□ 0.27
FGFR1-202ENST00000335922 CCDC102BQ68D86 513 aa16.75■□□□□ 0.27
FGFR1-202ENST00000335922 MCM9Q9NXL9 1143 aa16.75■□□□□ 0.27
FGFR1-202ENST00000335922 BCS1LQ9Y276 419 aa16.75■□□□□ 0.27
FGFR1-202ENST00000335922 MAP3K15Q6ZN16 1313 aa16.75■□□□□ 0.27
FGFR1-202ENST00000335922 ZFYP08048 801 aaPredicted RBP16.74■□□□□ 0.27
FGFR1-202ENST00000335922 GIGYF2Q6Y7W6 1299 aaKnown RBP16.74■□□□□ 0.27
FGFR1-202ENST00000335922 TM6SF1Q9BZW5 370 aa16.74■□□□□ 0.27
FGFR1-202ENST00000335922 ATP10DQ9P241 1426 aa16.74■□□□□ 0.27
FGFR1-202ENST00000335922 CDK12Q9NYV4 1490 aaPredicted RBP16.74■□□□□ 0.27
FGFR1-202ENST00000335922 MYO1BO43795 1136 aa16.74■□□□□ 0.27
FGFR1-202ENST00000335922 SCRN1Q12765 414 aa16.74■□□□□ 0.27
FGFR1-202ENST00000335922 MCM6Q14566 821 aa16.74■□□□□ 0.27
FGFR1-202ENST00000335922 GJD4Q96KN9 370 aaPredicted RBP16.74■□□□□ 0.27
FGFR1-202ENST00000335922 ZHX3Q9H4I2 956 aa16.74■□□□□ 0.27
FGFR1-202ENST00000335922 LZTFL1Q9NQ48 299 aa16.74■□□□□ 0.27
FGFR1-202ENST00000335922 EPB41L2O43491 1005 aaKnown RBP16.74■□□□□ 0.27
FGFR1-202ENST00000335922 SSBP05455 408 aaKnown RBP eCLIP16.74■□□□□ 0.27
FGFR1-202ENST00000335922 HLA-DOAP06340 250 aa16.74■□□□□ 0.27
FGFR1-202ENST00000335922 LRRC24Q50LG9 513 aa16.74■□□□□ 0.27
FGFR1-202ENST00000335922 XPO4Q9C0E2 1151 aaKnown RBP16.74■□□□□ 0.27
FGFR1-202ENST00000335922 GGA1Q9UJY5 639 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms