RNA–Protein interactions for RNA: ENST00000332966.8

SLIT3-201, Transcript of slit guidance ligand 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLIT3, Length 4,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-201ENST00000332966 SLC5A1P13866 664 aa18.01■□□□□ 0.47
SLIT3-201ENST00000332966 RBM6P78332 1123 aaKnown RBP18.01■□□□□ 0.47
SLIT3-201ENST00000332966 CCDC129Q6ZRS4 1044 aa18.01■□□□□ 0.47
SLIT3-201ENST00000332966 USP44Q9H0E7 712 aa18.01■□□□□ 0.47
SLIT3-201ENST00000332966 ANKRD18BA2A2Z9 1011 aa18.01■□□□□ 0.47
SLIT3-201ENST00000332966 NBPF7P0C2Y1 421 aaPredicted RBP18.01■□□□□ 0.47
SLIT3-201ENST00000332966 NOP2P46087 812 aaKnown RBP18.01■□□□□ 0.47
SLIT3-201ENST00000332966 FBXO38Q6PIJ6 1188 aa18.01■□□□□ 0.47
SLIT3-201ENST00000332966 EXOC1Q9NV70 894 aa18.01■□□□□ 0.47
SLIT3-201ENST00000332966 CCDC40Q4G0X9 1142 aa18.01■□□□□ 0.47
SLIT3-201ENST00000332966 CALML4Q96GE6 196 aa18.01■□□□□ 0.47
SLIT3-201ENST00000332966 PHF8Q9UPP1 1060 aa18.01■□□□□ 0.47
SLIT3-201ENST00000332966 PTCH1Q13635 1447 aa18■□□□□ 0.47
SLIT3-201ENST00000332966 TMEM266Q2M3C6 531 aa18■□□□□ 0.47
SLIT3-201ENST00000332966 RILPL1Q5EBL4 403 aa18■□□□□ 0.47
SLIT3-201ENST00000332966 ANKS4BQ8N8V4 417 aa18■□□□□ 0.47
SLIT3-201ENST00000332966 AMOTL2Q9Y2J4 779 aa18■□□□□ 0.47
SLIT3-201ENST00000332966 LDHAL6AQ6ZMR3 332 aa18■□□□□ 0.47
SLIT3-201ENST00000332966 TSGA10Q9BZW7 698 aa18■□□□□ 0.47
SLIT3-201ENST00000332966 SLFNL1Q499Z3 407 aa18■□□□□ 0.47
SLIT3-201ENST00000332966 ANKRD18AQ8IVF6 992 aa18■□□□□ 0.47
SLIT3-201ENST00000332966 NSRP1Q9H0G5 558 aaKnown RBP18■□□□□ 0.47
SLIT3-201ENST00000332966 PHLPP2Q6ZVD8 1323 aa17.99■□□□□ 0.47
SLIT3-201ENST00000332966 KIF5BP33176 963 aa17.99■□□□□ 0.47
SLIT3-201ENST00000332966 GOLGA6BA6NDN3 693 aa17.99■□□□□ 0.47
SLIT3-201ENST00000332966 UQCRFS1P1P0C7P4 283 aa17.99■□□□□ 0.47
SLIT3-201ENST00000332966 ARHGAP25P42331 645 aa17.99■□□□□ 0.47
SLIT3-201ENST00000332966 WHAMMP3Q1A5X7 153 aa17.99■□□□□ 0.47
SLIT3-201ENST00000332966 IQUBQ8NA54 791 aa17.99■□□□□ 0.47
SLIT3-201ENST00000332966 MED4Q9NPJ6 270 aa17.99■□□□□ 0.47
SLIT3-201ENST00000332966 STARD3NLO95772 234 aa17.99■□□□□ 0.47
SLIT3-201ENST00000332966 CLCN6P51797 869 aa17.99■□□□□ 0.47
SLIT3-201ENST00000332966 UNC5CLQ8IV45 518 aa17.99■□□□□ 0.47
SLIT3-201ENST00000332966 SELENOOQ9BVL4 669 aa17.99■□□□□ 0.47
SLIT3-201ENST00000332966 IDEP14735 1019 aa17.98■□□□□ 0.47
SLIT3-201ENST00000332966 OTUD7BQ6GQQ9 843 aa17.98■□□□□ 0.47
SLIT3-201ENST00000332966 DNAJC5BQ9UF47 199 aa17.98■□□□□ 0.47
SLIT3-201ENST00000332966 SEC63Q9UGP8 760 aaKnown RBP17.98■□□□□ 0.47
SLIT3-201ENST00000332966 A0A1B0GUA9 196 aa17.98■□□□□ 0.47
SLIT3-201ENST00000332966 ZC3H6P61129 1189 aaKnown RBP17.98■□□□□ 0.47
SLIT3-201ENST00000332966 PPFIA1Q13136 1202 aa17.98■□□□□ 0.47
SLIT3-201ENST00000332966 RPGRIP1Q96KN7 1286 aa17.98■□□□□ 0.47
SLIT3-201ENST00000332966 ZBTB3Q9H5J0 574 aa17.98■□□□□ 0.47
SLIT3-201ENST00000332966 ZNF853P0CG23 659 aa17.98■□□□□ 0.47
SLIT3-201ENST00000332966 TOM1L2Q6ZVM7 507 aa17.98■□□□□ 0.47
SLIT3-201ENST00000332966 FAM71BQ8TC56 605 aa17.98■□□□□ 0.47
SLIT3-201ENST00000332966 MORC2Q9Y6X9 1032 aaPredicted RBP17.98■□□□□ 0.47
SLIT3-201ENST00000332966 CCT6AP40227 531 aaKnown RBP17.97■□□□□ 0.47
SLIT3-201ENST00000332966 IKQ13123 557 aaPredicted RBP17.97■□□□□ 0.47
SLIT3-201ENST00000332966 TNNI3KQ59H18 835 aa17.97■□□□□ 0.47
SLIT3-201ENST00000332966 MYSM1Q5VVJ2 828 aa17.97■□□□□ 0.47
SLIT3-201ENST00000332966 MYCBPQ99417 103 aaPredicted RBP17.97■□□□□ 0.47
SLIT3-201ENST00000332966 RRP15Q9Y3B9 282 aaKnown RBP17.97■□□□□ 0.47
SLIT3-201ENST00000332966 FPGT-TNNI3KV9GXZ4 949 aa17.97■□□□□ 0.47
SLIT3-201ENST00000332966 MAP3K19Q56UN5 1328 aa17.97■□□□□ 0.47
SLIT3-201ENST00000332966 ACTN2P35609 894 aa17.97■□□□□ 0.47
SLIT3-201ENST00000332966 CPLX4Q7Z7G2 160 aa17.97■□□□□ 0.47
SLIT3-201ENST00000332966 EXOC4Q96A65 974 aa17.97■□□□□ 0.47
SLIT3-201ENST00000332966 CCDC51Q96ER9 411 aa17.97■□□□□ 0.47
SLIT3-201ENST00000332966 PFKFB2O60825 505 aa17.97■□□□□ 0.47
SLIT3-201ENST00000332966 HNRNPH2P55795 449 aaKnown RBP17.97■□□□□ 0.47
SLIT3-201ENST00000332966 ADCK5Q3MIX3 580 aa17.97■□□□□ 0.47
SLIT3-201ENST00000332966 CCDC155Q8N6L0 562 aa17.97■□□□□ 0.47
SLIT3-201ENST00000332966 SLC9C2Q5TAH2 1124 aa17.97■□□□□ 0.47
SLIT3-201ENST00000332966 SCLT1Q96NL6 688 aa17.97■□□□□ 0.47
SLIT3-201ENST00000332966 EFCC1Q9HA90 598 aa17.97■□□□□ 0.47
SLIT3-201ENST00000332966 A0A1W2PQ27 194 aa17.96■□□□□ 0.47
SLIT3-201ENST00000332966 A0A1W2PQ64 194 aa17.96■□□□□ 0.47
SLIT3-201ENST00000332966 A0A1W2PQD8 194 aa17.96■□□□□ 0.47
SLIT3-201ENST00000332966 MAP2K2P36507 400 aa17.96■□□□□ 0.47
SLIT3-201ENST00000332966 LRRC27Q9C0I9 530 aa17.96■□□□□ 0.47
SLIT3-201ENST00000332966 TRPM1Q7Z4N2 1603 aa17.96■□□□□ 0.47
SLIT3-201ENST00000332966 BICDL2A1A5D9 508 aa17.96■□□□□ 0.47
SLIT3-201ENST00000332966 STX10O60499 249 aa17.96■□□□□ 0.47
SLIT3-201ENST00000332966 C11orf57Q6ZUT1 292 aaPredicted RBP17.96■□□□□ 0.47
SLIT3-201ENST00000332966 KBTBD3Q8NAB2 608 aa17.96■□□□□ 0.47
SLIT3-201ENST00000332966 IFT81Q8WYA0 676 aa17.96■□□□□ 0.47
SLIT3-201ENST00000332966 MAP4K1Q92918 833 aa17.96■□□□□ 0.47
SLIT3-201ENST00000332966 ZNF287Q9HBT7 754 aa17.96■□□□□ 0.47
SLIT3-201ENST00000332966 SYNRGQ9UMZ2 1314 aa17.96■□□□□ 0.47
SLIT3-201ENST00000332966 PNMA6AP0CW24 399 aaPredicted RBP17.96■□□□□ 0.47
SLIT3-201ENST00000332966 PFKFB1P16118 471 aa17.96■□□□□ 0.47
SLIT3-201ENST00000332966 ADKP55263 362 aaKnown RBP17.96■□□□□ 0.47
SLIT3-201ENST00000332966 RSRC1Q96IZ7 334 aaKnown RBP17.96■□□□□ 0.47
SLIT3-201ENST00000332966 POSTNQ15063 836 aa17.95■□□□□ 0.46
SLIT3-201ENST00000332966 ESR2Q92731 530 aa17.95■□□□□ 0.46
SLIT3-201ENST00000332966 ZNF274Q96GC6 653 aaPredicted RBP17.95■□□□□ 0.46
SLIT3-201ENST00000332966 PCDHA7Q9UN72 937 aa17.95■□□□□ 0.46
SLIT3-201ENST00000332966 ATP10AO60312 1499 aa17.95■□□□□ 0.46
SLIT3-201ENST00000332966 POLR2DO15514 142 aaKnown RBP17.95■□□□□ 0.46
SLIT3-201ENST00000332966 CMA1P23946 247 aa17.95■□□□□ 0.46
SLIT3-201ENST00000332966 SARM1Q6SZW1 724 aa17.95■□□□□ 0.46
SLIT3-201ENST00000332966 IFNL2Q8IZJ0 200 aa17.95■□□□□ 0.46
SLIT3-201ENST00000332966 DDX21Q9NR30 783 aaKnown RBP eCLIP17.95■□□□□ 0.46
SLIT3-201ENST00000332966 DDIT3P35638 169 aa17.95■□□□□ 0.46
SLIT3-201ENST00000332966 MMRN2Q9H8L6 949 aa17.95■□□□□ 0.46
SLIT3-201ENST00000332966 PDE11AQ9HCR9 933 aa17.95■□□□□ 0.46
SLIT3-201ENST00000332966 WWC3Q9ULE0 1092 aa17.95■□□□□ 0.46
SLIT3-201ENST00000332966 SEC31AO94979 1220 aaKnown RBP17.94■□□□□ 0.46
SLIT3-201ENST00000332966 TNNC1P63316 161 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms