RNA–Protein interactions for RNA: ENST00000327443.8

SP1-201, Transcript of Sp1 transcription factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SP1, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-201ENST00000327443 MCM8Q9UJA3 840 aa11.33□□□□□ -0.6
SP1-201ENST00000327443 SGSM2O43147 1006 aa11.32□□□□□ -0.6
SP1-201ENST00000327443 DDX58O95786 925 aaKnown RBP11.32□□□□□ -0.6
SP1-201ENST00000327443 GCKP35557 465 aa11.32□□□□□ -0.6
SP1-201ENST00000327443 ANKRD44Q8N8A2 993 aa11.32□□□□□ -0.6
SP1-201ENST00000327443 COL5A3P25940 1745 aaPredicted RBP11.32□□□□□ -0.6
SP1-201ENST00000327443 SNUPNO95149 360 aaKnown RBP11.32□□□□□ -0.6
SP1-201ENST00000327443 LRP10Q7Z4F1 713 aa11.32□□□□□ -0.6
SP1-201ENST00000327443 ZBTB10Q96DT7 871 aa11.32□□□□□ -0.6
SP1-201ENST00000327443 TBC1D8O95759 1140 aa11.31□□□□□ -0.6
SP1-201ENST00000327443 OATP04181 439 aa11.31□□□□□ -0.6
SP1-201ENST00000327443 PDIA6Q15084 440 aa11.31□□□□□ -0.6
SP1-201ENST00000327443 DDX46Q7L014 1031 aaKnown RBP11.31□□□□□ -0.6
SP1-201ENST00000327443 ERC1Q8IUD2 1116 aa11.31□□□□□ -0.6
SP1-201ENST00000327443 LNPKQ9C0E8 428 aa11.31□□□□□ -0.6
SP1-201ENST00000327443 STRN4Q9NRL3 753 aa11.31□□□□□ -0.6
SP1-201ENST00000327443 TRMT1Q9NXH9 659 aaKnown RBP11.31□□□□□ -0.6
SP1-201ENST00000327443 ANKRD36CQ5JPF3 1778 aa11.31□□□□□ -0.6
SP1-201ENST00000327443 ADCY9O60503 1353 aa11.31□□□□□ -0.6
SP1-201ENST00000327443 EXOC5O00471 708 aa11.31□□□□□ -0.6
SP1-201ENST00000327443 GPTP24298 496 aa11.31□□□□□ -0.6
SP1-201ENST00000327443 PEX19P40855 299 aa11.31□□□□□ -0.6
SP1-201ENST00000327443 CRYMQ14894 314 aa11.31□□□□□ -0.6
SP1-201ENST00000327443 FILIP1Q7Z7B0 1213 aa11.31□□□□□ -0.6
SP1-201ENST00000327443 MRFAP1L1Q96HT8 127 aa11.31□□□□□ -0.6
SP1-201ENST00000327443 GOLGA6CA6NDK9 693 aa11.31□□□□□ -0.6
SP1-201ENST00000327443 GOLGA6BA6NDN3 693 aa11.31□□□□□ -0.6
SP1-201ENST00000327443 GOLGA6DP0CG33 693 aa11.31□□□□□ -0.6
SP1-201ENST00000327443 ATP2B2Q01814 1243 aa11.31□□□□□ -0.6
SP1-201ENST00000327443 KSR2Q6VAB6 950 aa11.31□□□□□ -0.6
SP1-201ENST00000327443 ANKRD18AQ8IVF6 992 aa11.31□□□□□ -0.6
SP1-201ENST00000327443 CHCHD3Q9NX63 227 aaKnown RBP11.31□□□□□ -0.6
SP1-201ENST00000327443 GOLGA6AQ9NYA3 693 aa11.31□□□□□ -0.6
SP1-201ENST00000327443 MKRN1Q9UHC7 482 aaKnown RBP11.31□□□□□ -0.6
SP1-201ENST00000327443 ODF2LQ9ULJ1 636 aa11.31□□□□□ -0.6
SP1-201ENST00000327443 H3BQF6 201 aa11.3□□□□□ -0.6
SP1-201ENST00000327443 NRDCO43847 1150 aa11.3□□□□□ -0.6
SP1-201ENST00000327443 RTN2O75298 545 aa11.3□□□□□ -0.6
SP1-201ENST00000327443 KIRREL3Q8IZU9 778 aa11.3□□□□□ -0.6
SP1-201ENST00000327443 CACTINQ8WUQ7 758 aaKnown RBP11.3□□□□□ -0.6
SP1-201ENST00000327443 ZNF396Q96N95 335 aaPredicted RBP11.3□□□□□ -0.6
SP1-201ENST00000327443 VPS18Q9P253 973 aa11.3□□□□□ -0.6
SP1-201ENST00000327443 PCDHGA4Q9Y5G9 962 aa11.3□□□□□ -0.6
SP1-201ENST00000327443 KCNQ3O43525 872 aa11.3□□□□□ -0.6
SP1-201ENST00000327443 RPS6KA5O75582 802 aa11.3□□□□□ -0.6
SP1-201ENST00000327443 RDXP35241 583 aaKnown RBP11.3□□□□□ -0.6
SP1-201ENST00000327443 ZRSR2Q15696 482 aaKnown RBP11.3□□□□□ -0.6
SP1-201ENST00000327443 HSP90AB4PQ58FF6 505 aa11.3□□□□□ -0.6
SP1-201ENST00000327443 G2E3Q7L622 706 aa11.3□□□□□ -0.6
SP1-201ENST00000327443 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.3□□□□□ -0.6
SP1-201ENST00000327443 ONECUT3O60422 494 aaPredicted RBP11.29□□□□□ -0.6
SP1-201ENST00000327443 HMMRO75330 724 aa11.29□□□□□ -0.6
SP1-201ENST00000327443 MTX1Q13505 466 aa11.29□□□□□ -0.6
SP1-201ENST00000327443 SETDB1Q15047 1291 aa11.29□□□□□ -0.6
SP1-201ENST00000327443 SLC5A9Q2M3M2 681 aa11.29□□□□□ -0.6
SP1-201ENST00000327443 CCDC183Q5T5S1 534 aa11.29□□□□□ -0.6
SP1-201ENST00000327443 NYAP1Q6ZVC0 841 aa11.29□□□□□ -0.6
SP1-201ENST00000327443 MYLK4Q86YV6 388 aaPredicted RBP11.29□□□□□ -0.6
SP1-201ENST00000327443 DRAXINQ8NBI3 349 aaPredicted RBP11.29□□□□□ -0.6
SP1-201ENST00000327443 TMOD3Q9NYL9 352 aa11.29□□□□□ -0.6
SP1-201ENST00000327443 LMCD1Q9NZU5 365 aa11.29□□□□□ -0.6
SP1-201ENST00000327443 CHPF2Q9P2E5 772 aa11.29□□□□□ -0.6
SP1-201ENST00000327443 EIF5P55010 431 aaKnown RBP11.29□□□□□ -0.6
SP1-201ENST00000327443 NUCB1Q02818 461 aa11.29□□□□□ -0.6
SP1-201ENST00000327443 BEND3Q5T5X7 828 aa11.29□□□□□ -0.6
SP1-201ENST00000327443 GORABQ5T7V8 394 aa11.29□□□□□ -0.6
SP1-201ENST00000327443 HHATQ5VTY9 493 aa11.29□□□□□ -0.6
SP1-201ENST00000327443 C3orf20Q8ND61 904 aa11.29□□□□□ -0.6
SP1-201ENST00000327443 UBXN4Q92575 508 aa11.29□□□□□ -0.6
SP1-201ENST00000327443 ZNF496Q96IT1 587 aaPredicted RBP11.29□□□□□ -0.6
SP1-201ENST00000327443 CRACR2AQ9BSW2 395 aa11.29□□□□□ -0.6
SP1-201ENST00000327443 CD248Q9HCU0 757 aa11.29□□□□□ -0.6
SP1-201ENST00000327443 A1CFQ9NQ94 594 aaKnown RBP11.29□□□□□ -0.6
SP1-201ENST00000327443 ORC3Q9UBD5 711 aaPredicted RBP11.29□□□□□ -0.6
SP1-201ENST00000327443 AFDNP55196 1824 aaKnown RBP11.29□□□□□ -0.6
SP1-201ENST00000327443 MAGEA8P43361 318 aa11.28□□□□□ -0.6
SP1-201ENST00000327443 GIMAP6Q6P9H5 292 aa11.28□□□□□ -0.6
SP1-201ENST00000327443 DCTPP1Q9H773 170 aa11.28□□□□□ -0.6
SP1-201ENST00000327443 TMEM165Q9HC07 324 aa11.28□□□□□ -0.6
SP1-201ENST00000327443 CCDC171Q6TFL3 1326 aa11.28□□□□□ -0.6
SP1-201ENST00000327443 ATP8B1O43520 1251 aa11.28□□□□□ -0.6
SP1-201ENST00000327443 LY75O60449 1722 aa11.28□□□□□ -0.6
SP1-201ENST00000327443 CAPN15O75808 1086 aa11.28□□□□□ -0.6
SP1-201ENST00000327443 EIF3JO75822 258 aaKnown RBP11.28□□□□□ -0.6
SP1-201ENST00000327443 GNAI2P04899 355 aa11.28□□□□□ -0.6
SP1-201ENST00000327443 SETSIPP0DME0 302 aa11.28□□□□□ -0.6
SP1-201ENST00000327443 USP4Q13107 963 aa11.28□□□□□ -0.6
SP1-201ENST00000327443 SRCIN1Q9C0H9 1055 aa11.28□□□□□ -0.6
SP1-201ENST00000327443 TSPYL2Q9H2G4 693 aaPredicted RBP11.28□□□□□ -0.6
SP1-201ENST00000327443 PECAM1P16284 738 aaPredicted RBP11.27□□□□□ -0.6
SP1-201ENST00000327443 HMGB2P26583 209 aaKnown RBP11.27□□□□□ -0.6
SP1-201ENST00000327443 PDCD2Q16342 344 aaPredicted RBP11.27□□□□□ -0.6
SP1-201ENST00000327443 LINS1Q8NG48 757 aa11.27□□□□□ -0.6
SP1-201ENST00000327443 SYTL4Q96C24 671 aaPredicted RBP11.27□□□□□ -0.6
SP1-201ENST00000327443 TMX3Q96JJ7 454 aa11.27□□□□□ -0.6
SP1-201ENST00000327443 IRX2Q9BZI1 471 aaPredicted RBP11.27□□□□□ -0.6
SP1-201ENST00000327443 CLIP2Q9UDT6 1046 aa11.27□□□□□ -0.6
SP1-201ENST00000327443 BLOC1S6Q9UL45 172 aa11.27□□□□□ -0.6
SP1-201ENST00000327443 CLNS1AP54105 237 aaKnown RBP11.27□□□□□ -0.61
SP1-201ENST00000327443 PIP4K2BP78356 416 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms