RNA–Protein interactions for RNA: ENST00000325327.3

LMNB2-201, Transcript of lamin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB2, Length 4,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-201ENST00000325327 XDHP47989 1333 aa19.36■□□□□ 0.69
LMNB2-201ENST00000325327 NCOA5Q9HCD5 579 aaKnown RBP19.36■□□□□ 0.69
LMNB2-201ENST00000325327 COL15A1P39059 1388 aa19.36■□□□□ 0.69
LMNB2-201ENST00000325327 A0A0D9SFI3 127 aa19.36■□□□□ 0.69
LMNB2-201ENST00000325327 PNPLA6Q8IY17 1366 aa19.36■□□□□ 0.69
LMNB2-201ENST00000325327 TECPR2O15040 1411 aa19.36■□□□□ 0.69
LMNB2-201ENST00000325327 NFIXQ14938 502 aa19.36■□□□□ 0.69
LMNB2-201ENST00000325327 CLEC4GQ6UXB4 293 aa19.36■□□□□ 0.69
LMNB2-201ENST00000325327 MAGEC2Q9UBF1 373 aaPredicted RBP19.36■□□□□ 0.69
LMNB2-201ENST00000325327 NASPP49321 788 aaPredicted RBP19.35■□□□□ 0.69
LMNB2-201ENST00000325327 UBE4AQ14139 1066 aa19.35■□□□□ 0.69
LMNB2-201ENST00000325327 CPXCR1Q8N123 301 aa19.35■□□□□ 0.69
LMNB2-201ENST00000325327 SSH2Q76I76 1423 aa19.35■□□□□ 0.69
LMNB2-201ENST00000325327 TTLL6Q8N841 843 aa19.35■□□□□ 0.69
LMNB2-201ENST00000325327 CELF1Q92879 486 aaKnown RBP19.35■□□□□ 0.69
LMNB2-201ENST00000325327 SCAND2PQ9GZW5 306 aaPredicted RBP19.35■□□□□ 0.69
LMNB2-201ENST00000325327 PICK1Q9NRD5 415 aa19.35■□□□□ 0.69
LMNB2-201ENST00000325327 MAST3O60307 1309 aa19.35■□□□□ 0.69
LMNB2-201ENST00000325327 hCG_1642624A0A1W2PR95 340 aa19.35■□□□□ 0.69
LMNB2-201ENST00000325327 SERPINC1P01008 464 aa19.34■□□□□ 0.69
LMNB2-201ENST00000325327 SP4Q02446 784 aa19.34■□□□□ 0.69
LMNB2-201ENST00000325327 WWC2Q6AWC2 1192 aa19.34■□□□□ 0.69
LMNB2-201ENST00000325327 CKAP2LQ8IYA6 745 aa19.34■□□□□ 0.69
LMNB2-201ENST00000325327 SPC24Q8NBT2 197 aa19.34■□□□□ 0.69
LMNB2-201ENST00000325327 ANAPC15P60006 121 aa19.34■□□□□ 0.69
LMNB2-201ENST00000325327 STIM1Q13586 685 aa19.34■□□□□ 0.69
LMNB2-201ENST00000325327 SLC27A2O14975 620 aa19.34■□□□□ 0.69
LMNB2-201ENST00000325327 CCDC192P0DO97 292 aa19.34■□□□□ 0.69
LMNB2-201ENST00000325327 UBA7P41226 1012 aa19.34■□□□□ 0.69
LMNB2-201ENST00000325327 GNAQP50148 359 aa19.34■□□□□ 0.69
LMNB2-201ENST00000325327 ISM2Q6H9L7 571 aa19.34■□□□□ 0.69
LMNB2-201ENST00000325327 TNPO1Q92973 898 aaKnown RBP19.34■□□□□ 0.69
LMNB2-201ENST00000325327 TSPY26PQ9H489 355 aa19.34■□□□□ 0.69
LMNB2-201ENST00000325327 BIN1O00499 593 aa19.33■□□□□ 0.69
LMNB2-201ENST00000325327 GSPT1P15170 499 aaKnown RBP19.33■□□□□ 0.69
LMNB2-201ENST00000325327 TFAP4Q01664 338 aa19.33■□□□□ 0.69
LMNB2-201ENST00000325327 TMEM266Q2M3C6 531 aa19.33■□□□□ 0.68
LMNB2-201ENST00000325327 SMARCC2Q8TAQ2 1214 aa19.33■□□□□ 0.68
LMNB2-201ENST00000325327 ITPK1Q13572 414 aa19.33■□□□□ 0.68
LMNB2-201ENST00000325327 DALRD3Q5D0E6 543 aaKnown RBP19.33■□□□□ 0.68
LMNB2-201ENST00000325327 ZFYVE27Q5T4F4 411 aa19.33■□□□□ 0.68
LMNB2-201ENST00000325327 FER1L4A9Z1Z3 1794 aa19.32■□□□□ 0.68
LMNB2-201ENST00000325327 H7C1W4 665 aa19.32■□□□□ 0.68
LMNB2-201ENST00000325327 DIXDC1Q155Q3 683 aa19.32■□□□□ 0.68
LMNB2-201ENST00000325327 RBM25P49756 843 aaKnown RBP19.32■□□□□ 0.68
LMNB2-201ENST00000325327 FSIP1Q8NA03 581 aa19.32■□□□□ 0.68
LMNB2-201ENST00000325327 RAD50Q92878 1312 aa19.32■□□□□ 0.68
LMNB2-201ENST00000325327 SYCE3A1L190 88 aa19.32■□□□□ 0.68
LMNB2-201ENST00000325327 CHRNA5P30532 468 aa19.32■□□□□ 0.68
LMNB2-201ENST00000325327 CT47A1Q5JQC4 288 aaPredicted RBP19.32■□□□□ 0.68
LMNB2-201ENST00000325327 SIRT2Q8IXJ6 389 aa19.32■□□□□ 0.68
LMNB2-201ENST00000325327 RAB34Q9BZG1 259 aa19.32■□□□□ 0.68
LMNB2-201ENST00000325327 MARCKSP29966 332 aaPredicted RBP19.31■□□□□ 0.68
LMNB2-201ENST00000325327 FCHSD1Q86WN1 690 aa19.31■□□□□ 0.68
LMNB2-201ENST00000325327 BTDP43251 543 aa19.31■□□□□ 0.68
LMNB2-201ENST00000325327 MST1RQ04912 1400 aa19.31■□□□□ 0.68
LMNB2-201ENST00000325327 RUFY3Q7L099 469 aa19.31■□□□□ 0.68
LMNB2-201ENST00000325327 CCDC178Q5BJE1 867 aa19.31■□□□□ 0.68
LMNB2-201ENST00000325327 FNBP4Q8N3X1 1017 aaPredicted RBP19.31■□□□□ 0.68
LMNB2-201ENST00000325327 UIMC1Q96RL1 719 aa19.31■□□□□ 0.68
LMNB2-201ENST00000325327 TCP11L1Q9NUJ3 509 aa19.31■□□□□ 0.68
LMNB2-201ENST00000325327 SASH1O94885 1247 aa19.3■□□□□ 0.68
LMNB2-201ENST00000325327 GRAPQ13588 217 aa19.3■□□□□ 0.68
LMNB2-201ENST00000325327 EZH2Q15910 746 aaKnown RBP19.3■□□□□ 0.68
LMNB2-201ENST00000325327 FILIP1LQ4L180 1135 aa19.3■□□□□ 0.68
LMNB2-201ENST00000325327 SLC27A3Q5K4L6 730 aa19.3■□□□□ 0.68
LMNB2-201ENST00000325327 GRAPLQ8TC17 118 aaPredicted RBP19.3■□□□□ 0.68
LMNB2-201ENST00000325327 LEMD3Q9Y2U8 911 aa19.3■□□□□ 0.68
LMNB2-201ENST00000325327 IBTKQ9P2D0 1353 aaPredicted RBP19.3■□□□□ 0.68
LMNB2-201ENST00000325327 DLC1Q96QB1 1528 aa19.3■□□□□ 0.68
LMNB2-201ENST00000325327 PTPDC1A2A3K4 754 aa19.3■□□□□ 0.68
LMNB2-201ENST00000325327 LINC00116Q8NCU8 138 aa19.3■□□□□ 0.68
LMNB2-201ENST00000325327 PKD2L1Q9P0L9 805 aa19.3■□□□□ 0.68
LMNB2-201ENST00000325327 KDM2BQ8NHM5 1336 aa19.29■□□□□ 0.68
LMNB2-201ENST00000325327 NPR1P16066 1061 aa19.29■□□□□ 0.68
LMNB2-201ENST00000325327 MYO3AQ8NEV4 1616 aa19.29■□□□□ 0.68
LMNB2-201ENST00000325327 SLC1A4P43007 532 aa19.29■□□□□ 0.68
LMNB2-201ENST00000325327 PTH1RQ03431 593 aa19.29■□□□□ 0.68
LMNB2-201ENST00000325327 ZC3H13Q5T200 1668 aaKnown RBP19.29■□□□□ 0.68
LMNB2-201ENST00000325327 BAG4O95429 457 aaKnown RBP19.29■□□□□ 0.68
LMNB2-201ENST00000325327 PARP1P09874 1014 aaKnown RBP19.29■□□□□ 0.68
LMNB2-201ENST00000325327 CCDC93Q567U6 631 aa19.29■□□□□ 0.68
LMNB2-201ENST00000325327 RRP36Q96EU6 259 aaKnown RBP19.29■□□□□ 0.68
LMNB2-201ENST00000325327 CLIP2Q9UDT6 1046 aa19.29■□□□□ 0.68
LMNB2-201ENST00000325327 OTUD7BQ6GQQ9 843 aa19.28■□□□□ 0.68
LMNB2-201ENST00000325327 VTI1AQ96AJ9 217 aa19.28■□□□□ 0.68
LMNB2-201ENST00000325327 PDCL3Q9H2J4 239 aa19.28■□□□□ 0.68
LMNB2-201ENST00000325327 HOMER2Q9NSB8 354 aa19.28■□□□□ 0.68
LMNB2-201ENST00000325327 PIM2Q9P1W9 311 aa19.28■□□□□ 0.68
LMNB2-201ENST00000325327 SNX14Q9Y5W7 946 aa19.28■□□□□ 0.68
LMNB2-201ENST00000325327 CNNM3Q8NE01 707 aa19.28■□□□□ 0.68
LMNB2-201ENST00000325327 MASTLQ96GX5 879 aa19.28■□□□□ 0.68
LMNB2-201ENST00000325327 HAUS7Q99871 368 aa19.28■□□□□ 0.68
LMNB2-201ENST00000325327 V9GY48 417 aaPredicted RBP19.28■□□□□ 0.68
LMNB2-201ENST00000325327 DYNLL1P63167 89 aaKnown RBP19.28■□□□□ 0.68
LMNB2-201ENST00000325327 EHMT1Q9H9B1 1298 aa19.28■□□□□ 0.68
LMNB2-201ENST00000325327 A0A0G2JLW4 131 aa19.28■□□□□ 0.68
LMNB2-201ENST00000325327 CALM1P0DP23 149 aa19.28■□□□□ 0.68
LMNB2-201ENST00000325327 CALM2P0DP24 149 aa19.28■□□□□ 0.68
LMNB2-201ENST00000325327 CALM3P0DP25 149 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms