RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 MAP3K11Q16584 847 aa11.89□□□□□ -0.51
SF3B2-201ENST00000322535 GIMAP7Q8NHV1 300 aa11.89□□□□□ -0.51
SF3B2-201ENST00000322535 CCDC26Q8TAB7 109 aa11.89□□□□□ -0.51
SF3B2-201ENST00000322535 KLHDC4Q8TBB5 520 aa11.89□□□□□ -0.51
SF3B2-201ENST00000322535 ZNF483Q8TF39 744 aaPredicted RBP11.89□□□□□ -0.51
SF3B2-201ENST00000322535 DNAJC25Q9H1X3 360 aa11.89□□□□□ -0.51
SF3B2-201ENST00000322535 IL1RAPL2Q9NP60 686 aa11.89□□□□□ -0.51
SF3B2-201ENST00000322535 VPS18Q9P253 973 aa11.89□□□□□ -0.51
SF3B2-201ENST00000322535 CCDC69A6NI79 296 aa11.88□□□□□ -0.51
SF3B2-201ENST00000322535 ERVV-2B6SEH9 535 aa11.88□□□□□ -0.51
SF3B2-201ENST00000322535 SNX1Q13596 522 aa11.88□□□□□ -0.51
SF3B2-201ENST00000322535 NYAP1Q6ZVC0 841 aa11.88□□□□□ -0.51
SF3B2-201ENST00000322535 ARHGEF1Q92888 912 aaKnown RBP11.88□□□□□ -0.51
SF3B2-201ENST00000322535 KDM3BQ7LBC6 1761 aa11.88□□□□□ -0.51
SF3B2-201ENST00000322535 SCN11AQ9UI33 1791 aa11.88□□□□□ -0.51
SF3B2-201ENST00000322535 HEG1Q9ULI3 1381 aa11.88□□□□□ -0.51
SF3B2-201ENST00000322535 ZRANB2O95218 330 aaKnown RBP eCLIP11.88□□□□□ -0.51
SF3B2-201ENST00000322535 PDE6BP35913 854 aa11.88□□□□□ -0.51
SF3B2-201ENST00000322535 KCNV1Q6PIU1 500 aa11.88□□□□□ -0.51
SF3B2-201ENST00000322535 KSR2Q6VAB6 950 aa11.88□□□□□ -0.51
SF3B2-201ENST00000322535 UNC5CLQ8IV45 518 aa11.88□□□□□ -0.51
SF3B2-201ENST00000322535 NUP62CLQ9H1M0 184 aa11.88□□□□□ -0.51
SF3B2-201ENST00000322535 VPS37CA5D8V6 355 aaPredicted RBP11.87□□□□□ -0.51
SF3B2-201ENST00000322535 IGKV5-2P06315 115 aa11.87□□□□□ -0.51
SF3B2-201ENST00000322535 ZSCAN22P10073 491 aaPredicted RBP11.87□□□□□ -0.51
SF3B2-201ENST00000322535 TBC1D25Q3MII6 688 aa11.87□□□□□ -0.51
SF3B2-201ENST00000322535 ISM2Q6H9L7 571 aa11.87□□□□□ -0.51
SF3B2-201ENST00000322535 ANKRD13DQ6ZTN6 518 aa11.87□□□□□ -0.51
SF3B2-201ENST00000322535 FAM177A1Q8N128 213 aaPredicted RBP11.87□□□□□ -0.51
SF3B2-201ENST00000322535 CCAR2Q8N163 923 aaKnown RBP11.87□□□□□ -0.51
SF3B2-201ENST00000322535 ANKRD44Q8N8A2 993 aa11.87□□□□□ -0.51
SF3B2-201ENST00000322535 CCDC85AQ96PX6 553 aaPredicted RBP11.87□□□□□ -0.51
SF3B2-201ENST00000322535 JPH2Q9BR39 696 aaPredicted RBP11.87□□□□□ -0.51
SF3B2-201ENST00000322535 HYPKQ9NX55 129 aa11.87□□□□□ -0.51
SF3B2-201ENST00000322535 PA2G4Q9UQ80 394 aaKnown RBP11.87□□□□□ -0.51
SF3B2-201ENST00000322535 SPATA31A5Q5VU36 1347 aa11.87□□□□□ -0.51
SF3B2-201ENST00000322535 SPATA31A7Q8IWB4 1347 aa11.87□□□□□ -0.51
SF3B2-201ENST00000322535 ELF1P32519 619 aa11.87□□□□□ -0.51
SF3B2-201ENST00000322535 ZNF165P49910 485 aa11.87□□□□□ -0.51
SF3B2-201ENST00000322535 PPP1R42Q7Z4L9 355 aa11.87□□□□□ -0.51
SF3B2-201ENST00000322535 UBXN6Q9BZV1 441 aa11.87□□□□□ -0.51
SF3B2-201ENST00000322535 TNMDQ9H2S6 317 aa11.87□□□□□ -0.51
SF3B2-201ENST00000322535 GNL3LQ9NVN8 582 aaKnown RBP11.87□□□□□ -0.51
SF3B2-201ENST00000322535 SMC3Q9UQE7 1217 aa11.87□□□□□ -0.51
SF3B2-201ENST00000322535 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.87□□□□□ -0.512e-10■■■□□ 18.7
SF3B2-201ENST00000322535 SRGAP3O43295 1099 aa11.87□□□□□ -0.51
SF3B2-201ENST00000322535 HNRNPH1P31943 449 aaKnown RBP11.87□□□□□ -0.51
SF3B2-201ENST00000322535 NKX1-1Q15270 411 aaPredicted RBP11.87□□□□□ -0.51
SF3B2-201ENST00000322535 MFSD4BQ5TF39 518 aa11.87□□□□□ -0.51
SF3B2-201ENST00000322535 SIL1Q9H173 461 aa11.87□□□□□ -0.51
SF3B2-201ENST00000322535 ATP10DQ9P241 1426 aa11.86□□□□□ -0.51
SF3B2-201ENST00000322535 URI1O94763 535 aaPredicted RBP11.86□□□□□ -0.51
SF3B2-201ENST00000322535 HOXB7P09629 217 aa11.86□□□□□ -0.51
SF3B2-201ENST00000322535 CUL4AQ13619 759 aa11.86□□□□□ -0.51
SF3B2-201ENST00000322535 FAM173BQ6P4H8 233 aa11.86□□□□□ -0.51
SF3B2-201ENST00000322535 TADA2BQ86TJ2 420 aa11.86□□□□□ -0.51
SF3B2-201ENST00000322535 FERMT3Q86UX7 667 aa11.86□□□□□ -0.51
SF3B2-201ENST00000322535 ORC3Q9UBD5 711 aaPredicted RBP11.86□□□□□ -0.51
SF3B2-201ENST00000322535 C5P01031 1676 aa11.86□□□□□ -0.51
SF3B2-201ENST00000322535 GOLGA6L4A6NEF3 574 aa11.86□□□□□ -0.51
SF3B2-201ENST00000322535 GOLGA6L19H0YKK7 550 aa11.86□□□□□ -0.51
SF3B2-201ENST00000322535 STX6O43752 255 aa11.86□□□□□ -0.51
SF3B2-201ENST00000322535 PHACTR2O75167 634 aa11.86□□□□□ -0.51
SF3B2-201ENST00000322535 SYT1P21579 422 aa11.86□□□□□ -0.51
SF3B2-201ENST00000322535 DHX8Q14562 1220 aaKnown RBP11.86□□□□□ -0.51
SF3B2-201ENST00000322535 GBP6Q6ZN66 633 aa11.86□□□□□ -0.51
SF3B2-201ENST00000322535 PLA2G4DQ86XP0 818 aa11.86□□□□□ -0.51
SF3B2-201ENST00000322535 DNAI1Q9UI46 699 aa11.86□□□□□ -0.51
SF3B2-201ENST00000322535 ANKRD18BA2A2Z9 1011 aa11.85□□□□□ -0.51
SF3B2-201ENST00000322535 TBC1D8O95759 1140 aa11.85□□□□□ -0.51
SF3B2-201ENST00000322535 ABCD1P33897 745 aa11.85□□□□□ -0.51
SF3B2-201ENST00000322535 MCM6Q14566 821 aa11.85□□□□□ -0.51
SF3B2-201ENST00000322535 NFXL1Q6ZNB6 911 aa11.85□□□□□ -0.51
SF3B2-201ENST00000322535 LRP10Q7Z4F1 713 aa11.85□□□□□ -0.51
SF3B2-201ENST00000322535 CARD6Q9BX69 1037 aa11.85□□□□□ -0.51
SF3B2-201ENST00000322535 TBC1D2BQ9UPU7 963 aa11.85□□□□□ -0.51
SF3B2-201ENST00000322535 A0A087WWV3 80 aa11.85□□□□□ -0.51
SF3B2-201ENST00000322535 IVLP07476 585 aa11.85□□□□□ -0.51
SF3B2-201ENST00000322535 GPTP24298 496 aa11.85□□□□□ -0.51
SF3B2-201ENST00000322535 MCM2P49736 904 aa11.85□□□□□ -0.51
SF3B2-201ENST00000322535 GRIK3Q13003 919 aa11.85□□□□□ -0.51
SF3B2-201ENST00000322535 UBE3BQ7Z3V4 1068 aa11.85□□□□□ -0.51
SF3B2-201ENST00000322535 TEX11Q8IYF3 940 aa11.85□□□□□ -0.51
SF3B2-201ENST00000322535 SYNE4Q8N205 404 aa11.85□□□□□ -0.51
SF3B2-201ENST00000322535 N4BP2L2Q92802 583 aaPredicted RBP11.85□□□□□ -0.51
SF3B2-201ENST00000322535 TEX13AQ9BXU3 409 aaPredicted RBP11.85□□□□□ -0.51
SF3B2-201ENST00000322535 MAF1Q9H063 256 aa11.85□□□□□ -0.51
SF3B2-201ENST00000322535 DACT1Q9NYF0 836 aa11.85□□□□□ -0.51
SF3B2-201ENST00000322535 LRP6O75581 1613 aa11.85□□□□□ -0.51
SF3B2-201ENST00000322535 JCADQ9P266 1359 aa11.85□□□□□ -0.51
SF3B2-201ENST00000322535 PKD1L3Q7Z443 1732 aa11.84□□□□□ -0.51
SF3B2-201ENST00000322535 H3BQF6 201 aa11.84□□□□□ -0.51
SF3B2-201ENST00000322535 SURF6O75683 361 aaKnown RBP11.84□□□□□ -0.51
SF3B2-201ENST00000322535 GNAI3P08754 354 aa11.84□□□□□ -0.51
SF3B2-201ENST00000322535 FBXW10Q5XX13 1052 aa11.84□□□□□ -0.51
SF3B2-201ENST00000322535 PROCA1Q8NCQ7 364 aaPredicted RBP11.84□□□□□ -0.51
SF3B2-201ENST00000322535 SUCLG2Q96I99 432 aa11.84□□□□□ -0.51
SF3B2-201ENST00000322535 DCTPP1Q9H773 170 aa11.84□□□□□ -0.51
SF3B2-201ENST00000322535 EPHA10Q5JZY3 1008 aa11.84□□□□□ -0.51
SF3B2-201ENST00000322535 WWC2Q6AWC2 1192 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms