RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 STYK1Q6J9G0 422 aa16.78■□□□□ 0.28
VRK3-201ENST00000316763 GRAPLQ8TC17 118 aaPredicted RBP16.78■□□□□ 0.28
VRK3-201ENST00000316763 ARAP2Q8WZ64 1704 aa16.78■□□□□ 0.28
VRK3-201ENST00000316763 MTMR6Q9Y217 621 aa16.78■□□□□ 0.28
VRK3-201ENST00000316763 GOLIM4O00461 696 aa16.77■□□□□ 0.28
VRK3-201ENST00000316763 UBE4AQ14139 1066 aa16.77■□□□□ 0.28
VRK3-201ENST00000316763 CCDC183Q5T5S1 534 aa16.77■□□□□ 0.28
VRK3-201ENST00000316763 FHDC1Q9C0D6 1143 aaPredicted RBP16.77■□□□□ 0.28
VRK3-201ENST00000316763 ALDH1B1P30837 517 aa16.76■□□□□ 0.27
VRK3-201ENST00000316763 PHKA1P46020 1223 aa16.76■□□□□ 0.27
VRK3-201ENST00000316763 LARP1BQ659C4 914 aaKnown RBP16.76■□□□□ 0.27
VRK3-201ENST00000316763 NECAB1Q8N987 351 aa16.76■□□□□ 0.27
VRK3-201ENST00000316763 VPS37CA5D8V6 355 aaPredicted RBP16.76■□□□□ 0.27
VRK3-201ENST00000316763 UQCRFS1P1P0C7P4 283 aa16.76■□□□□ 0.27
VRK3-201ENST00000316763 MCAMP43121 646 aa16.76■□□□□ 0.27
VRK3-201ENST00000316763 ZSCAN30Q86W11 494 aa16.76■□□□□ 0.27
VRK3-201ENST00000316763 NLGN2Q8NFZ4 835 aa16.76■□□□□ 0.27
VRK3-201ENST00000316763 PDLIM2Q96JY6 352 aa16.76■□□□□ 0.27
VRK3-201ENST00000316763 ANKRD2Q9GZV1 360 aa16.76■□□□□ 0.27
VRK3-201ENST00000316763 SLX4Q8IY92 1834 aa16.76■□□□□ 0.27
VRK3-201ENST00000316763 HELLSQ9NRZ9 838 aa16.75■□□□□ 0.27
VRK3-201ENST00000316763 BRCA1P38398 1863 aaKnown RBP16.75■□□□□ 0.27
VRK3-201ENST00000316763 BBOX1O75936 387 aa16.74■□□□□ 0.27
VRK3-201ENST00000316763 FKBP4Q02790 459 aaKnown RBP eCLIP16.74■□□□□ 0.27
VRK3-201ENST00000316763 ST3GAL1Q11201 340 aa16.74■□□□□ 0.27
VRK3-201ENST00000316763 FAM184AQ8NB25 1140 aa16.74■□□□□ 0.27
VRK3-201ENST00000316763 CNKSR1Q969H4 720 aa16.74■□□□□ 0.27
VRK3-201ENST00000316763 NEK1Q96PY6 1258 aa16.74■□□□□ 0.27
VRK3-201ENST00000316763 A0A1B0GUL6 1792 aa16.74■□□□□ 0.27
VRK3-201ENST00000316763 FIBPO43427 364 aa16.74■□□□□ 0.27
VRK3-201ENST00000316763 MSNP26038 577 aaKnown RBP16.74■□□□□ 0.27
VRK3-201ENST00000316763 ZAP70P43403 619 aa16.74■□□□□ 0.27
VRK3-201ENST00000316763 TOB2Q14106 344 aaPredicted RBP16.74■□□□□ 0.27
VRK3-201ENST00000316763 SYT17Q9BSW7 474 aa16.74■□□□□ 0.27
VRK3-201ENST00000316763 WTIPA6NIX2 430 aaPredicted RBP16.73■□□□□ 0.27
VRK3-201ENST00000316763 PI16Q6UXB8 463 aa16.73■□□□□ 0.27
VRK3-201ENST00000316763 SLC51AQ86UW1 340 aa16.73■□□□□ 0.27
VRK3-201ENST00000316763 PIM2Q9P1W9 311 aa16.73■□□□□ 0.27
VRK3-201ENST00000316763 ZNF804BA4D1E1 1349 aa16.73■□□□□ 0.27
VRK3-201ENST00000316763 HMGB1P09429 215 aaKnown RBP16.72■□□□□ 0.27
VRK3-201ENST00000316763 BCAMP50895 628 aa16.72■□□□□ 0.27
VRK3-201ENST00000316763 DNM1Q05193 864 aaKnown RBP16.72■□□□□ 0.27
VRK3-201ENST00000316763 UVSSAQ2YD98 709 aa16.72■□□□□ 0.27
VRK3-201ENST00000316763 LRRFIP1Q32MZ4 808 aaKnown RBP16.72■□□□□ 0.27
VRK3-201ENST00000316763 TTLL6Q8N841 843 aa16.72■□□□□ 0.27
VRK3-201ENST00000316763 WWC3Q9ULE0 1092 aa16.72■□□□□ 0.27
VRK3-201ENST00000316763 AKAP11Q9UKA4 1901 aa16.72■□□□□ 0.27
VRK3-201ENST00000316763 PPEF1O14829 653 aaPredicted RBP16.72■□□□□ 0.27
VRK3-201ENST00000316763 KRT85P78386 507 aa16.72■□□□□ 0.27
VRK3-201ENST00000316763 RASGRF1Q13972 1273 aa16.72■□□□□ 0.27
VRK3-201ENST00000316763 SRCAPQ6ZRS2 3230 aa16.71■□□□□ 0.27
VRK3-201ENST00000316763 TTF1Q15361 905 aaPredicted RBP16.71■□□□□ 0.27
VRK3-201ENST00000316763 CCDC129Q6ZRS4 1044 aa16.71■□□□□ 0.27
VRK3-201ENST00000316763 TCEANC2Q96MN5 208 aa16.71■□□□□ 0.27
VRK3-201ENST00000316763 DSCC1Q9BVC3 393 aa16.71■□□□□ 0.27
VRK3-201ENST00000316763 TAF6LQ9Y6J9 622 aa16.71■□□□□ 0.27
VRK3-201ENST00000316763 IRS2Q9Y4H2 1338 aa16.7■□□□□ 0.26
VRK3-201ENST00000316763 CHGBP05060 677 aa16.7■□□□□ 0.26
VRK3-201ENST00000316763 ZMYM1Q5SVZ6 1142 aa16.7■□□□□ 0.26
VRK3-201ENST00000316763 FBXO33Q7Z6M2 555 aa16.7■□□□□ 0.26
VRK3-201ENST00000316763 SP8Q8IXZ3 490 aa16.7■□□□□ 0.26
VRK3-201ENST00000316763 SPATA5Q8NB90 893 aa16.7■□□□□ 0.26
VRK3-201ENST00000316763 RNF214Q8ND24 703 aa16.7■□□□□ 0.26
VRK3-201ENST00000316763 SEC62Q99442 399 aaKnown RBP16.7■□□□□ 0.26
VRK3-201ENST00000316763 ATP6V0A2Q9Y487 856 aa16.7■□□□□ 0.26
VRK3-201ENST00000316763 ZBTB22O15209 634 aa16.7■□□□□ 0.26
VRK3-201ENST00000316763 RNF113AO15541 343 aaKnown RBP16.7■□□□□ 0.26
VRK3-201ENST00000316763 ZFYP08048 801 aaPredicted RBP16.7■□□□□ 0.26
VRK3-201ENST00000316763 OLFM4Q6UX06 510 aa16.7■□□□□ 0.26
VRK3-201ENST00000316763 TMC4Q7Z404 712 aa16.7■□□□□ 0.26
VRK3-201ENST00000316763 FAM84BQ96KN1 310 aaPredicted RBP16.7■□□□□ 0.26
VRK3-201ENST00000316763 ZNF219Q9P2Y4 722 aaPredicted RBP16.7■□□□□ 0.26
VRK3-201ENST00000316763 CCDC39Q9UFE4 941 aa16.7■□□□□ 0.26
VRK3-201ENST00000316763 LEMD3Q9Y2U8 911 aa16.7■□□□□ 0.26
VRK3-201ENST00000316763 CYP21A2P08686 494 aa16.69■□□□□ 0.26
VRK3-201ENST00000316763 GYG1P46976 350 aa16.69■□□□□ 0.26
VRK3-201ENST00000316763 FGD1P98174 961 aa16.69■□□□□ 0.26
VRK3-201ENST00000316763 CAVIN4Q5BKX8 364 aa16.69■□□□□ 0.26
VRK3-201ENST00000316763 Q6ZUG5 572 aa16.69■□□□□ 0.26
VRK3-201ENST00000316763 C7orf43Q8WVR3 580 aa16.69■□□□□ 0.26
VRK3-201ENST00000316763 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.69■□□□□ 0.26
VRK3-201ENST00000316763 XDHP47989 1333 aa16.69■□□□□ 0.26
VRK3-201ENST00000316763 STK3Q13188 491 aa16.68■□□□□ 0.26
VRK3-201ENST00000316763 DALRD3Q5D0E6 543 aaKnown RBP16.68■□□□□ 0.26
VRK3-201ENST00000316763 GTF3C6Q969F1 213 aa16.68■□□□□ 0.26
VRK3-201ENST00000316763 NAP1L5Q96NT1 182 aaPredicted RBP16.68■□□□□ 0.26
VRK3-201ENST00000316763 PIH1D3Q9NQM4 214 aaKnown RBP16.68■□□□□ 0.26
VRK3-201ENST00000316763 LRRC37AA6NMS7 1700 aa16.68■□□□□ 0.26
VRK3-201ENST00000316763 ELP1O95163 1332 aa16.68■□□□□ 0.26
VRK3-201ENST00000316763 C21orf2O43822 256 aa16.68■□□□□ 0.26
VRK3-201ENST00000316763 KLRK1P26718 216 aa16.68■□□□□ 0.26
VRK3-201ENST00000316763 CDC37L1Q7L3B6 337 aa16.68■□□□□ 0.26
VRK3-201ENST00000316763 SCAND2PQ9GZW5 306 aaPredicted RBP16.68■□□□□ 0.26
VRK3-201ENST00000316763 GNL3LQ9NVN8 582 aaKnown RBP16.68■□□□□ 0.26
VRK3-201ENST00000316763 ANKIB1Q9P2G1 1089 aa16.68■□□□□ 0.26
VRK3-201ENST00000316763 NOL7Q9UMY1 257 aaKnown RBP16.68■□□□□ 0.26
VRK3-201ENST00000316763 MCM5P33992 734 aa16.67■□□□□ 0.26
VRK3-201ENST00000316763 COL9A3Q14050 684 aaPredicted RBP16.67■□□□□ 0.26
VRK3-201ENST00000316763 SLFNL1Q499Z3 407 aa16.67■□□□□ 0.26
VRK3-201ENST00000316763 C15orf52Q6ZUT6 534 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms