RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 CCDC24Q8N4L8 307 aa17.32■□□□□ 0.36
CLK4-201ENST00000316308 LPIN2Q92539 896 aa17.32■□□□□ 0.36
CLK4-201ENST00000316308 FBXW7Q969H0 707 aa17.32■□□□□ 0.36
CLK4-201ENST00000316308 ZSCAN16Q9H4T2 348 aaPredicted RBP17.32■□□□□ 0.36
CLK4-201ENST00000316308 CBX8Q9HC52 389 aa17.32■□□□□ 0.36
CLK4-201ENST00000316308 CDC27P30260 824 aa17.32■□□□□ 0.36
CLK4-201ENST00000316308 HMGN5P82970 282 aaKnown RBP17.32■□□□□ 0.36
CLK4-201ENST00000316308 SNW1Q13573 536 aaKnown RBP17.32■□□□□ 0.36
CLK4-201ENST00000316308 FAM182BQ5T319 152 aa17.32■□□□□ 0.36
CLK4-201ENST00000316308 RALYLQ86SE5 291 aaKnown RBP17.32■□□□□ 0.36
CLK4-201ENST00000316308 SLC51AQ86UW1 340 aa17.32■□□□□ 0.36
CLK4-201ENST00000316308 CCAR1Q8IX12 1150 aaKnown RBP17.32■□□□□ 0.36
CLK4-201ENST00000316308 STRBPQ96SI9 672 aaKnown RBP17.32■□□□□ 0.36
CLK4-201ENST00000316308 MPHOSPH8Q99549 860 aa17.32■□□□□ 0.36
CLK4-201ENST00000316308 UTP14AQ9BVJ6 771 aaKnown RBP17.32■□□□□ 0.36
CLK4-201ENST00000316308 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.32■□□□□ 0.36
CLK4-201ENST00000316308 CLIC4Q9Y696 253 aa17.32■□□□□ 0.36
CLK4-201ENST00000316308 NTSR2O95665 410 aa17.31■□□□□ 0.36
CLK4-201ENST00000316308 MIGA1Q8NAN2 632 aa17.31■□□□□ 0.36
CLK4-201ENST00000316308 PHKBQ93100 1093 aa17.31■□□□□ 0.36
CLK4-201ENST00000316308 RCOR1Q9UKL0 485 aa17.31■□□□□ 0.36
CLK4-201ENST00000316308 MBD4O95243 580 aa17.31■□□□□ 0.36
CLK4-201ENST00000316308 BICDL1Q6ZP65 573 aa17.31■□□□□ 0.36
CLK4-201ENST00000316308 ORC3Q9UBD5 711 aaPredicted RBP17.31■□□□□ 0.36
CLK4-201ENST00000316308 ADGRA1Q86SQ6 560 aa17.3■□□□□ 0.36
CLK4-201ENST00000316308 ZKSCAN3Q9BRR0 538 aa17.3■□□□□ 0.36
CLK4-201ENST00000316308 KCNF1Q9H3M0 494 aa17.3■□□□□ 0.36
CLK4-201ENST00000316308 PLCH1Q4KWH8 1693 aa17.3■□□□□ 0.36
CLK4-201ENST00000316308 MYH15Q9Y2K3 1946 aa17.3■□□□□ 0.36
CLK4-201ENST00000316308 UBE3CQ15386 1083 aa17.3■□□□□ 0.36
CLK4-201ENST00000316308 RBM43Q6ZSC3 357 aaKnown RBP17.3■□□□□ 0.36
CLK4-201ENST00000316308 C11orf57Q6ZUT1 292 aaPredicted RBP17.3■□□□□ 0.36
CLK4-201ENST00000316308 MICU3Q86XE3 530 aa17.3■□□□□ 0.36
CLK4-201ENST00000316308 FAM200AQ8TCP9 573 aa17.3■□□□□ 0.36
CLK4-201ENST00000316308 AIDAQ96BJ3 306 aa17.3■□□□□ 0.36
CLK4-201ENST00000316308 PDIA4P13667 645 aaKnown RBP17.29■□□□□ 0.36
CLK4-201ENST00000316308 LCORLQ8N3X6 602 aa17.29■□□□□ 0.36
CLK4-201ENST00000316308 ZNF512BQ96KM6 892 aaPredicted RBP17.29■□□□□ 0.36
CLK4-201ENST00000316308 CFAP45Q9UL16 551 aa17.29■□□□□ 0.36
CLK4-201ENST00000316308 PCDHA7Q9UN72 937 aa17.29■□□□□ 0.36
CLK4-201ENST00000316308 WNK3Q9BYP7 1800 aa17.29■□□□□ 0.36
CLK4-201ENST00000316308 A0A1B0GVL5 298 aa17.29■□□□□ 0.36
CLK4-201ENST00000316308 ME1P48163 572 aa17.29■□□□□ 0.36
CLK4-201ENST00000316308 FAM98CQ17RN3 349 aaKnown RBP17.29■□□□□ 0.36
CLK4-201ENST00000316308 LRRFIP1Q32MZ4 808 aaKnown RBP17.29■□□□□ 0.36
CLK4-201ENST00000316308 FBXL16Q8N461 479 aa17.29■□□□□ 0.36
CLK4-201ENST00000316308 DDX19AQ9NUU7 478 aaKnown RBP17.29■□□□□ 0.36
CLK4-201ENST00000316308 NRBP1Q9UHY1 535 aa17.29■□□□□ 0.36
CLK4-201ENST00000316308 MROH5Q6ZUA9 1318 aa17.28■□□□□ 0.36
CLK4-201ENST00000316308 CHRNDQ07001 517 aa17.28■□□□□ 0.36
CLK4-201ENST00000316308 LINC00116Q8NCU8 138 aa17.28■□□□□ 0.36
CLK4-201ENST00000316308 C8orf76Q96K31 380 aa17.28■□□□□ 0.36
CLK4-201ENST00000316308 ERFEQ4G0M1 354 aa17.28■□□□□ 0.36
CLK4-201ENST00000316308 TICAM2Q86XR7 235 aa17.28■□□□□ 0.36
CLK4-201ENST00000316308 IFNL3Q8IZI9 196 aa17.28■□□□□ 0.36
CLK4-201ENST00000316308 CMTR1Q8N1G2 835 aaKnown RBP17.28■□□□□ 0.36
CLK4-201ENST00000316308 ABCC12Q96J65 1359 aa17.27■□□□□ 0.36
CLK4-201ENST00000316308 SPATA31A5Q5VU36 1347 aa17.27■□□□□ 0.36
CLK4-201ENST00000316308 SPATA31A7Q8IWB4 1347 aa17.27■□□□□ 0.36
CLK4-201ENST00000316308 GSG1L2A8MUP6 293 aa17.27■□□□□ 0.36
CLK4-201ENST00000316308 GYG1P46976 350 aa17.27■□□□□ 0.36
CLK4-201ENST00000316308 TTF1Q15361 905 aaPredicted RBP17.27■□□□□ 0.36
CLK4-201ENST00000316308 ENGASEQ8NFI3 743 aa17.27■□□□□ 0.36
CLK4-201ENST00000316308 FBXO18Q8NFZ0 1043 aa17.27■□□□□ 0.36
CLK4-201ENST00000316308 PYCARDQ9ULZ3 195 aa17.27■□□□□ 0.36
CLK4-201ENST00000316308 DDX60Q8IY21 1712 aaKnown RBP17.27■□□□□ 0.36
CLK4-201ENST00000316308 SH2B2O14492 632 aaPredicted RBP17.27■□□□□ 0.35
CLK4-201ENST00000316308 CPLX1O14810 134 aa17.27■□□□□ 0.35
CLK4-201ENST00000316308 SLC5A1P13866 664 aa17.27■□□□□ 0.35
CLK4-201ENST00000316308 AMIGO3Q86WK7 504 aa17.27■□□□□ 0.35
CLK4-201ENST00000316308 IGDCC4Q8TDY8 1250 aa17.27■□□□□ 0.35
CLK4-201ENST00000316308 ZSWIM5Q9P217 1185 aa17.27■□□□□ 0.35
CLK4-201ENST00000316308 ANGEL1Q9UNK9 670 aaKnown RBP17.27■□□□□ 0.35
CLK4-201ENST00000316308 LRP5O75197 1615 aa17.26■□□□□ 0.35
CLK4-201ENST00000316308 RANBP6O60518 1105 aaKnown RBP17.26■□□□□ 0.35
CLK4-201ENST00000316308 EVX2Q03828 476 aa17.26■□□□□ 0.35
CLK4-201ENST00000316308 FSIP1Q8NA03 581 aa17.26■□□□□ 0.35
CLK4-201ENST00000316308 FAM217BQ9NTX9 383 aaPredicted RBP17.26■□□□□ 0.35
CLK4-201ENST00000316308 AHDC1Q5TGY3 1603 aaPredicted RBP17.26■□□□□ 0.35
CLK4-201ENST00000316308 COL22A1Q8NFW1 1626 aaPredicted RBP17.26■□□□□ 0.35
CLK4-201ENST00000316308 ATRNO75882 1429 aa17.26■□□□□ 0.35
CLK4-201ENST00000316308 KLRK1P26718 216 aa17.26■□□□□ 0.35
CLK4-201ENST00000316308 ZNF165P49910 485 aa17.26■□□□□ 0.35
CLK4-201ENST00000316308 RRP12Q5JTH9 1297 aaKnown RBP17.26■□□□□ 0.35
CLK4-201ENST00000316308 APOA5Q6Q788 366 aa17.26■□□□□ 0.35
CLK4-201ENST00000316308 CCDC82Q8N4S0 544 aa17.26■□□□□ 0.35
CLK4-201ENST00000316308 SDR42E1Q8WUS8 393 aa17.26■□□□□ 0.35
CLK4-201ENST00000316308 ZSCAN25Q6NSZ9 544 aa17.25■□□□□ 0.35
CLK4-201ENST00000316308 UQCRFS1P1P0C7P4 283 aa17.25■□□□□ 0.35
CLK4-201ENST00000316308 NDUFA8P51970 172 aa17.25■□□□□ 0.35
CLK4-201ENST00000316308 TRDNQ13061 729 aa17.25■□□□□ 0.35
CLK4-201ENST00000316308 LINC00301Q8NCQ3 95 aa17.25■□□□□ 0.35
CLK4-201ENST00000316308 LY9Q9HBG7 655 aa17.25■□□□□ 0.35
CLK4-201ENST00000316308 NRAPQ86VF7 1730 aa17.24■□□□□ 0.35
CLK4-201ENST00000316308 PHLPP1O60346 1717 aa17.24■□□□□ 0.35
CLK4-201ENST00000316308 C4AP0C0L4 1744 aa17.24■□□□□ 0.35
CLK4-201ENST00000316308 C4BP0C0L5 1744 aa17.24■□□□□ 0.35
CLK4-201ENST00000316308 MARCKSP29966 332 aaPredicted RBP17.24■□□□□ 0.35
CLK4-201ENST00000316308 GUCY1A2P33402 732 aa17.24■□□□□ 0.35
CLK4-201ENST00000316308 METAP2P50579 478 aaKnown RBP eCLIP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms