RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 TRAPPC3LQ5T215 181 aa18.09■□□□□ 0.49
USP42-201ENST00000306177 TMEM87BQ96K49 555 aa18.09■□□□□ 0.49
USP42-201ENST00000306177 BMS1Q14692 1282 aaKnown RBP18.08■□□□□ 0.49
USP42-201ENST00000306177 TTC6Q86TZ1 520 aa18.08■□□□□ 0.49
USP42-201ENST00000306177 RBM17Q96I25 401 aaKnown RBP18.08■□□□□ 0.49
USP42-201ENST00000306177 CPA1P15085 419 aa18.08■□□□□ 0.49
USP42-201ENST00000306177 DTHD1Q6ZMT9 781 aa18.08■□□□□ 0.49
USP42-201ENST00000306177 XAGE2Q96GT9 111 aa18.08■□□□□ 0.49
USP42-201ENST00000306177 PLVAPQ9BX97 442 aa18.08■□□□□ 0.49
USP42-201ENST00000306177 DNAI1Q9UI46 699 aa18.08■□□□□ 0.49
USP42-201ENST00000306177 JAG2Q9Y219 1238 aa18.08■□□□□ 0.49
USP42-201ENST00000306177 ZKSCAN5Q9Y2L8 839 aa18.08■□□□□ 0.49
USP42-201ENST00000306177 MYCNP04198 464 aaPredicted RBP18.08■□□□□ 0.48
USP42-201ENST00000306177 DNAJC10Q8IXB1 793 aa18.08■□□□□ 0.48
USP42-201ENST00000306177 VEZTQ9HBM0 779 aa18.08■□□□□ 0.48
USP42-201ENST00000306177 CCNL1Q9UK58 526 aaPredicted RBP18.08■□□□□ 0.48
USP42-201ENST00000306177 CCDC129Q6ZRS4 1044 aa18.08■□□□□ 0.48
USP42-201ENST00000306177 IQUBQ8NA54 791 aa18.08■□□□□ 0.48
USP42-201ENST00000306177 ZNF594Q96JF6 807 aaPredicted RBP18.08■□□□□ 0.48
USP42-201ENST00000306177 RIMBP2O15034 1052 aa18.07■□□□□ 0.48
USP42-201ENST00000306177 CNBD1Q8NA66 436 aa18.07■□□□□ 0.48
USP42-201ENST00000306177 APPBP2Q92624 585 aa18.07■□□□□ 0.48
USP42-201ENST00000306177 KDM6BO15054 1643 aa18.07■□□□□ 0.48
USP42-201ENST00000306177 GOLGA6L10A0A0M3HER8 536 aa18.07■□□□□ 0.48
USP42-201ENST00000306177 CTAGE15A4D2H0 777 aa18.07■□□□□ 0.48
USP42-201ENST00000306177 CCDC175P0C221 793 aa18.07■□□□□ 0.48
USP42-201ENST00000306177 CTAGE8P0CG41 777 aa18.07■□□□□ 0.48
USP42-201ENST00000306177 PAXIP1Q6ZW49 1069 aaPredicted RBP18.07■□□□□ 0.48
USP42-201ENST00000306177 CTAGE6Q86UF2 777 aa18.07■□□□□ 0.48
USP42-201ENST00000306177 CTAGE4Q8IX94 777 aa18.07■□□□□ 0.48
USP42-201ENST00000306177 MAGI2Q86UL8 1455 aa18.07■□□□□ 0.48
USP42-201ENST00000306177 ZKSCAN3Q9BRR0 538 aa18.07■□□□□ 0.48
USP42-201ENST00000306177 SGSM2O43147 1006 aa18.06■□□□□ 0.48
USP42-201ENST00000306177 PARP1P09874 1014 aaKnown RBP18.06■□□□□ 0.48
USP42-201ENST00000306177 KIAA0753Q2KHM9 967 aa18.06■□□□□ 0.48
USP42-201ENST00000306177 MAATS1Q7Z4T9 603 aa18.06■□□□□ 0.48
USP42-201ENST00000306177 SNX14Q9Y5W7 946 aa18.06■□□□□ 0.48
USP42-201ENST00000306177 CLCN1P35523 988 aa18.06■□□□□ 0.48
USP42-201ENST00000306177 LLPHQ9BRT6 129 aaKnown RBP18.06■□□□□ 0.48
USP42-201ENST00000306177 B4E1Z4 1266 aa18.06■□□□□ 0.48
USP42-201ENST00000306177 KRT83P78385 493 aa18.06■□□□□ 0.48
USP42-201ENST00000306177 TTC37Q6PGP7 1564 aa18.06■□□□□ 0.48
USP42-201ENST00000306177 METP08581 1390 aa18.06■□□□□ 0.48
USP42-201ENST00000306177 MICALCLQ6ZW33 695 aa18.05■□□□□ 0.48
USP42-201ENST00000306177 ELP1O95163 1332 aa18.05■□□□□ 0.48
USP42-201ENST00000306177 RNF123Q5XPI4 1314 aa18.05■□□□□ 0.48
USP42-201ENST00000306177 KDM5DQ9BY66 1539 aa18.05■□□□□ 0.48
USP42-201ENST00000306177 TACC1O75410 805 aa18.05■□□□□ 0.48
USP42-201ENST00000306177 HIBADHP31937 336 aaKnown RBP18.05■□□□□ 0.48
USP42-201ENST00000306177 EFCAB6Q5THR3 1501 aa18.05■□□□□ 0.48
USP42-201ENST00000306177 RILPL1Q5EBL4 403 aa18.05■□□□□ 0.48
USP42-201ENST00000306177 IL17REQ8NFR9 667 aa18.05■□□□□ 0.48
USP42-201ENST00000306177 NAP1L4Q99733 375 aaKnown RBP18.05■□□□□ 0.48
USP42-201ENST00000306177 CCDC87Q9NVE4 849 aa18.05■□□□□ 0.48
USP42-201ENST00000306177 KIF24Q5T7B8 1368 aa18.05■□□□□ 0.48
USP42-201ENST00000306177 ERVK-7P63135 1459 aa18.04■□□□□ 0.48
USP42-201ENST00000306177 DEXIO95424 95 aa18.04■□□□□ 0.48
USP42-201ENST00000306177 FAM160A1Q05DH4 1040 aa18.04■□□□□ 0.48
USP42-201ENST00000306177 TEX11Q8IYF3 940 aa18.04■□□□□ 0.48
USP42-201ENST00000306177 TTC12Q9H892 705 aaPredicted RBP18.04■□□□□ 0.48
USP42-201ENST00000306177 FAM13AO94988 1023 aa18.04■□□□□ 0.48
USP42-201ENST00000306177 HS1BP3Q53T59 392 aa18.04■□□□□ 0.48
USP42-201ENST00000306177 KBTBD3Q8NAB2 608 aa18.04■□□□□ 0.48
USP42-201ENST00000306177 PTGS1P23219 599 aa18.04■□□□□ 0.48
USP42-201ENST00000306177 ACTN2P35609 894 aa18.04■□□□□ 0.48
USP42-201ENST00000306177 STX17P56962 302 aa18.04■□□□□ 0.48
USP42-201ENST00000306177 FAM135BQ49AJ0 1406 aa18.04■□□□□ 0.48
USP42-201ENST00000306177 UGGT1Q9NYU2 1555 aa18.04■□□□□ 0.48
USP42-201ENST00000306177 PHACTR2O75167 634 aa18.04■□□□□ 0.48
USP42-201ENST00000306177 JDP2Q8WYK2 163 aa18.04■□□□□ 0.48
USP42-201ENST00000306177 FAM227BQ96M60 508 aa18.04■□□□□ 0.48
USP42-201ENST00000306177 SRRTQ9BXP5 876 aaKnown RBP18.04■□□□□ 0.48
USP42-201ENST00000306177 ARMT1Q9H993 441 aa18.04■□□□□ 0.48
USP42-201ENST00000306177 GPAA1O43292 621 aa18.03■□□□□ 0.48
USP42-201ENST00000306177 PRPHP41219 470 aa18.03■□□□□ 0.48
USP42-201ENST00000306177 FERMT1Q9BQL6 677 aa18.03■□□□□ 0.48
USP42-201ENST00000306177 SELENOOQ9BVL4 669 aa18.03■□□□□ 0.48
USP42-201ENST00000306177 ABCC4O15439 1325 aa18.03■□□□□ 0.48
USP42-201ENST00000306177 ANGEL1Q9UNK9 670 aaKnown RBP18.03■□□□□ 0.48
USP42-201ENST00000306177 KRT86O43790 486 aa18.03■□□□□ 0.48
USP42-201ENST00000306177 UBXN1Q04323 297 aa18.03■□□□□ 0.48
USP42-201ENST00000306177 HS2ST1Q7LGA3 356 aa18.03■□□□□ 0.48
USP42-201ENST00000306177 MLH3Q9UHC1 1453 aa18.03■□□□□ 0.48
USP42-201ENST00000306177 FSD2A1L4K1 749 aa18.03■□□□□ 0.48
USP42-201ENST00000306177 B4DLN1 442 aa18.03■□□□□ 0.48
USP42-201ENST00000306177 MRPL12P52815 198 aaKnown RBP18.03■□□□□ 0.48
USP42-201ENST00000306177 IFNKQ9P0W0 207 aa18.03■□□□□ 0.48
USP42-201ENST00000306177 MYOM2P54296 1465 aa18.03■□□□□ 0.48
USP42-201ENST00000306177 GIGYF1O75420 1035 aaPredicted RBP18.02■□□□□ 0.48
USP42-201ENST00000306177 KIF5AQ12840 1032 aa18.02■□□□□ 0.48
USP42-201ENST00000306177 CCDC42Q96M95 316 aa18.02■□□□□ 0.48
USP42-201ENST00000306177 INCENPQ9NQS7 918 aa18.02■□□□□ 0.48
USP42-201ENST00000306177 A0A1B0GVL5 298 aa18.02■□□□□ 0.48
USP42-201ENST00000306177 ERVV-2B6SEH9 535 aa18.02■□□□□ 0.48
USP42-201ENST00000306177 UFL1O94874 794 aa18.02■□□□□ 0.48
USP42-201ENST00000306177 LPIN2Q92539 896 aa18.02■□□□□ 0.48
USP42-201ENST00000306177 CTAGE9A4FU28 777 aa18.02■□□□□ 0.48
USP42-201ENST00000306177 KCNQ3O43525 872 aa18.02■□□□□ 0.48
USP42-201ENST00000306177 FAM98CQ17RN3 349 aaKnown RBP18.02■□□□□ 0.48
USP42-201ENST00000306177 BBXQ8WY36 941 aaPredicted RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms