RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 GTF2A1P52655 376 aaPredicted RBP13.09□□□□□ -0.31
TRUB1-201ENST00000298746 ZNF569Q5MCW4 686 aa13.09□□□□□ -0.31
TRUB1-201ENST00000298746 WWC2Q6AWC2 1192 aa13.09□□□□□ -0.31
TRUB1-201ENST00000298746 TTC5Q8N0Z6 440 aa13.09□□□□□ -0.31
TRUB1-201ENST00000298746 KAZALD1Q96I82 304 aa13.09□□□□□ -0.31
TRUB1-201ENST00000298746 DDX21Q9NR30 783 aaKnown RBP eCLIP13.09□□□□□ -0.31
TRUB1-201ENST00000298746 RRP15Q9Y3B9 282 aaKnown RBP13.09□□□□□ -0.31
TRUB1-201ENST00000298746 HSPD1P10809 573 aaKnown RBP13.09□□□□□ -0.31
TRUB1-201ENST00000298746 AKAP17AQ02040 695 aaKnown RBP13.09□□□□□ -0.31
TRUB1-201ENST00000298746 GCKRQ14397 625 aa13.09□□□□□ -0.31
TRUB1-201ENST00000298746 TAF7LQ5H9L4 462 aa13.09□□□□□ -0.31
TRUB1-201ENST00000298746 USPL1Q5W0Q7 1092 aa13.09□□□□□ -0.31
TRUB1-201ENST00000298746 ANKRD13DQ6ZTN6 518 aa13.09□□□□□ -0.31
TRUB1-201ENST00000298746 BRAPQ7Z569 592 aa13.09□□□□□ -0.31
TRUB1-201ENST00000298746 FBXO18Q8NFZ0 1043 aa13.09□□□□□ -0.31
TRUB1-201ENST00000298746 AIFM3Q96NN9 605 aa13.09□□□□□ -0.31
TRUB1-201ENST00000298746 NFE2L3Q9Y4A8 694 aa13.09□□□□□ -0.31
TRUB1-201ENST00000298746 PXDNLA1KZ92 1463 aa13.08□□□□□ -0.31
TRUB1-201ENST00000298746 RNMTO43148 476 aaKnown RBP13.08□□□□□ -0.32
TRUB1-201ENST00000298746 CCDC175P0C221 793 aa13.08□□□□□ -0.32
TRUB1-201ENST00000298746 TOGARAM2Q6ZUX3 1019 aa13.08□□□□□ -0.32
TRUB1-201ENST00000298746 CMA1P23946 247 aa13.08□□□□□ -0.32
TRUB1-201ENST00000298746 TRIM65Q6PJ69 517 aa13.08□□□□□ -0.32
TRUB1-201ENST00000298746 VSTM4Q8IW00 320 aa13.08□□□□□ -0.32
TRUB1-201ENST00000298746 GOLGA5Q8TBA6 731 aa13.08□□□□□ -0.32
TRUB1-201ENST00000298746 ZNF274Q96GC6 653 aaPredicted RBP13.08□□□□□ -0.32
TRUB1-201ENST00000298746 LCMT1Q9UIC8 334 aa13.08□□□□□ -0.32
TRUB1-201ENST00000298746 ADGRL3Q9HAR2 1447 aa13.08□□□□□ -0.32
TRUB1-201ENST00000298746 USP31Q70CQ4 1352 aa13.08□□□□□ -0.32
TRUB1-201ENST00000298746 NEURL1BA8MQ27 555 aa13.07□□□□□ -0.32
TRUB1-201ENST00000298746 STX17P56962 302 aa13.07□□□□□ -0.32
TRUB1-201ENST00000298746 RABGGTAQ92696 567 aa13.07□□□□□ -0.32
TRUB1-201ENST00000298746 ACBD3Q9H3P7 528 aa13.07□□□□□ -0.32
TRUB1-201ENST00000298746 PCDHA5Q9Y5H7 936 aa13.07□□□□□ -0.32
TRUB1-201ENST00000298746 NRKQ7Z2Y5 1582 aa13.07□□□□□ -0.32
TRUB1-201ENST00000298746 ATP8B1O43520 1251 aa13.07□□□□□ -0.32
TRUB1-201ENST00000298746 IGKV5-2P06315 115 aa13.07□□□□□ -0.32
TRUB1-201ENST00000298746 ILDR1Q86SU0 546 aaPredicted RBP13.07□□□□□ -0.32
TRUB1-201ENST00000298746 REXO1L1PQ8IX06 675 aa13.07□□□□□ -0.32
TRUB1-201ENST00000298746 SIRT1Q96EB6 747 aa13.07□□□□□ -0.32
TRUB1-201ENST00000298746 PLEKHA4Q9H4M7 779 aa13.07□□□□□ -0.32
TRUB1-201ENST00000298746 FAM53CQ9NYF3 392 aa13.07□□□□□ -0.32
TRUB1-201ENST00000298746 ZNF609O15014 1411 aa13.07□□□□□ -0.32
TRUB1-201ENST00000298746 VWA3AA6NCI4 1184 aa13.07□□□□□ -0.32
TRUB1-201ENST00000298746 TULP2O00295 520 aa13.07□□□□□ -0.32
TRUB1-201ENST00000298746 IKBKBO14920 756 aa13.07□□□□□ -0.32
TRUB1-201ENST00000298746 ACTN2P35609 894 aa13.07□□□□□ -0.32
TRUB1-201ENST00000298746 TXLNAP40222 546 aa13.07□□□□□ -0.32
TRUB1-201ENST00000298746 NCAPHQ15003 741 aa13.07□□□□□ -0.32
TRUB1-201ENST00000298746 HDXQ7Z353 690 aa13.07□□□□□ -0.32
TRUB1-201ENST00000298746 PHKBQ93100 1093 aa13.07□□□□□ -0.32
TRUB1-201ENST00000298746 POLR3EQ9NVU0 708 aa13.07□□□□□ -0.32
TRUB1-201ENST00000298746 ZNF213O14771 459 aa13.06□□□□□ -0.32
TRUB1-201ENST00000298746 FDPSP14324 419 aaKnown RBP13.06□□□□□ -0.32
TRUB1-201ENST00000298746 SAFBQ15424 915 aaKnown RBP eCLIP13.06□□□□□ -0.32
TRUB1-201ENST00000298746 HAUS7Q99871 368 aa13.06□□□□□ -0.32
TRUB1-201ENST00000298746 IVLP07476 585 aa13.06□□□□□ -0.32
TRUB1-201ENST00000298746 SPECC1LQ69YQ0 1117 aa13.06□□□□□ -0.32
TRUB1-201ENST00000298746 KCNH3Q9ULD8 1083 aa13.06□□□□□ -0.32
TRUB1-201ENST00000298746 FAN1Q9Y2M0 1017 aa13.06□□□□□ -0.32
TRUB1-201ENST00000298746 DIP2CQ9Y2E4 1556 aa13.06□□□□□ -0.32
TRUB1-201ENST00000298746 PREX1Q8TCU6 1659 aa13.06□□□□□ -0.32
TRUB1-201ENST00000298746 TTC39AQ5SRH9 613 aa13.06□□□□□ -0.32
TRUB1-201ENST00000298746 VPS37DQ86XT2 251 aa13.06□□□□□ -0.32
TRUB1-201ENST00000298746 EXOC4Q96A65 974 aa13.06□□□□□ -0.32
TRUB1-201ENST00000298746 LTKP29376 864 aa13.05□□□□□ -0.32
TRUB1-201ENST00000298746 METAP2P50579 478 aaKnown RBP eCLIP13.05□□□□□ -0.32
TRUB1-201ENST00000298746 MTF1Q14872 753 aa13.05□□□□□ -0.32
TRUB1-201ENST00000298746 AXDND1Q5T1B0 1012 aaPredicted RBP13.05□□□□□ -0.32
TRUB1-201ENST00000298746 NCOA7Q8NI08 942 aa13.05□□□□□ -0.32
TRUB1-201ENST00000298746 BPIFA3Q9BQP9 254 aa13.05□□□□□ -0.32
TRUB1-201ENST00000298746 SUGCTQ9HAC7 445 aa13.05□□□□□ -0.32
TRUB1-201ENST00000298746 RAI14Q9P0K7 980 aa13.05□□□□□ -0.32
TRUB1-201ENST00000298746 KIF28PB7ZC32 967 aa13.05□□□□□ -0.32
TRUB1-201ENST00000298746 CSB-PGBD3P0DP91 1061 aa13.05□□□□□ -0.32
TRUB1-201ENST00000298746 CEBPAP49715 358 aaPredicted RBP13.05□□□□□ -0.32
TRUB1-201ENST00000298746 PTPN12Q05209 780 aaKnown RBP13.05□□□□□ -0.32
TRUB1-201ENST00000298746 TTC31Q49AM3 519 aaPredicted RBP13.05□□□□□ -0.32
TRUB1-201ENST00000298746 AMOTQ4VCS5 1084 aa13.05□□□□□ -0.32
TRUB1-201ENST00000298746 GDAP1L1Q96MZ0 367 aa13.05□□□□□ -0.32
TRUB1-201ENST00000298746 HELLSQ9NRZ9 838 aa13.05□□□□□ -0.32
TRUB1-201ENST00000298746 DACH1Q9UI36 760 aa13.05□□□□□ -0.32
TRUB1-201ENST00000298746 COL15A1P39059 1388 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 CCDC151A5D8V7 595 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 RNF113AO15541 343 aaKnown RBP13.04□□□□□ -0.32
TRUB1-201ENST00000298746 KCNJ6P48051 423 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 FILIP1LQ4L180 1135 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 ESCO1Q5FWF5 840 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 GPATCH11Q8N954 259 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 DSCC1Q9BVC3 393 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 NLRP2Q9NX02 1062 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 CTAGE15A4D2H0 777 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 SOWAHDA6NJG2 315 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 STX10O60499 249 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 CTAGE8P0CG41 777 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 LONRF3Q496Y0 759 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 RRP12Q5JTH9 1297 aaKnown RBP13.04□□□□□ -0.32
TRUB1-201ENST00000298746 CTAGE6Q86UF2 777 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 CTAGE4Q8IX94 777 aa13.04□□□□□ -0.32
TRUB1-201ENST00000298746 ZNF594Q96JF6 807 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms