RNA–Protein interactions for RNA: ENST00000298564.14

TSPAN17-201, Transcript of tetraspanin 17, humanhuman

TSL 2 BASIC

Gene TSPAN17, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-201ENST00000298564 RIPOR2Q9Y4F9 1068 aa20.72■□□□□ 0.91
TSPAN17-201ENST00000298564 FOXP2O15409 715 aa20.72■□□□□ 0.91
TSPAN17-201ENST00000298564 LAMA4Q16363 1823 aa20.72■□□□□ 0.91
TSPAN17-201ENST00000298564 CCAR2Q8N163 923 aaKnown RBP20.72■□□□□ 0.91
TSPAN17-201ENST00000298564 ZNF446Q9NWS9 450 aa20.72■□□□□ 0.91
TSPAN17-201ENST00000298564 PTPDC1A2A3K4 754 aa20.71■□□□□ 0.91
TSPAN17-201ENST00000298564 ADD1P35611 737 aaKnown RBP20.71■□□□□ 0.91
TSPAN17-201ENST00000298564 SNW1Q13573 536 aaKnown RBP20.71■□□□□ 0.91
TSPAN17-201ENST00000298564 SYT10Q6XYQ8 523 aa20.71■□□□□ 0.91
TSPAN17-201ENST00000298564 NYAP1Q6ZVC0 841 aa20.71■□□□□ 0.91
TSPAN17-201ENST00000298564 KRT222Q8N1A0 295 aa20.71■□□□□ 0.91
TSPAN17-201ENST00000298564 FSIP1Q8NA03 581 aa20.71■□□□□ 0.91
TSPAN17-201ENST00000298564 PUS7LQ9H0K6 701 aaKnown RBP20.71■□□□□ 0.91
TSPAN17-201ENST00000298564 SMC2O95347 1197 aa20.71■□□□□ 0.91
TSPAN17-201ENST00000298564 LRRFIP1Q32MZ4 808 aaKnown RBP20.71■□□□□ 0.91
TSPAN17-201ENST00000298564 KINO60870 393 aaKnown RBP20.7■□□□□ 0.9
TSPAN17-201ENST00000298564 STX1AQ16623 288 aa20.7■□□□□ 0.9
TSPAN17-201ENST00000298564 ZNF397Q8NF99 534 aaPredicted RBP20.7■□□□□ 0.9
TSPAN17-201ENST00000298564 SDF4Q9BRK5 362 aa20.7■□□□□ 0.9
TSPAN17-201ENST00000298564 GPHNQ9NQX3 736 aaPredicted RBP20.7■□□□□ 0.9
TSPAN17-201ENST00000298564 GJB4Q9NTQ9 266 aa20.7■□□□□ 0.9
TSPAN17-201ENST00000298564 TRMT112Q9UI30 125 aaKnown RBP20.7■□□□□ 0.9
TSPAN17-201ENST00000298564 TBC1D2BQ9UPU7 963 aa20.7■□□□□ 0.9
TSPAN17-201ENST00000298564 IRS4O14654 1257 aaPredicted RBP20.7■□□□□ 0.9
TSPAN17-201ENST00000298564 FGAP02671 866 aa20.7■□□□□ 0.9
TSPAN17-201ENST00000298564 ZFYP08048 801 aaPredicted RBP20.7■□□□□ 0.9
TSPAN17-201ENST00000298564 PDIA3P30101 505 aaKnown RBP20.7■□□□□ 0.9
TSPAN17-201ENST00000298564 CNNM1Q9NRU3 951 aa20.7■□□□□ 0.9
TSPAN17-201ENST00000298564 CFAP45Q9UL16 551 aa20.7■□□□□ 0.9
TSPAN17-201ENST00000298564 CDHR2Q9BYE9 1310 aa20.69■□□□□ 0.9
TSPAN17-201ENST00000298564 CTSWP56202 376 aa20.69■□□□□ 0.9
TSPAN17-201ENST00000298564 CCDC73Q6ZRK6 1079 aa20.69■□□□□ 0.9
TSPAN17-201ENST00000298564 ZSCAN16Q9H4T2 348 aaPredicted RBP20.69■□□□□ 0.9
TSPAN17-201ENST00000298564 BCL9O00512 1426 aa20.69■□□□□ 0.9
TSPAN17-201ENST00000298564 POLR3DP05423 398 aaPredicted RBP20.69■□□□□ 0.9
TSPAN17-201ENST00000298564 GOLGA8FQ08AF8 430 aa20.69■□□□□ 0.9
TSPAN17-201ENST00000298564 GOLGA8DPQ0D2H9 430 aa20.69■□□□□ 0.9
TSPAN17-201ENST00000298564 TMX1Q9H3N1 280 aa20.69■□□□□ 0.9
TSPAN17-201ENST00000298564 ANKRD18BA2A2Z9 1011 aa20.68■□□□□ 0.9
TSPAN17-201ENST00000298564 EXOC5O00471 708 aa20.68■□□□□ 0.9
TSPAN17-201ENST00000298564 MCAMP43121 646 aa20.68■□□□□ 0.9
TSPAN17-201ENST00000298564 TMC6Q7Z403 805 aa20.68■□□□□ 0.9
TSPAN17-201ENST00000298564 APPBP2Q92624 585 aa20.68■□□□□ 0.9
TSPAN17-201ENST00000298564 RIC1Q4ADV7 1423 aa20.68■□□□□ 0.9
TSPAN17-201ENST00000298564 SPEF2Q9C093 1822 aa20.68■□□□□ 0.9
TSPAN17-201ENST00000298564 NHSL1Q5SYE7 1610 aa20.68■□□□□ 0.9
TSPAN17-201ENST00000298564 IMMTQ16891 758 aaKnown RBP20.68■□□□□ 0.9
TSPAN17-201ENST00000298564 NBPF11Q86T75 865 aa20.68■□□□□ 0.9
TSPAN17-201ENST00000298564 EPC1Q9H2F5 836 aa20.68■□□□□ 0.9
TSPAN17-201ENST00000298564 DPCR1Q3MIW9 517 aa20.68■□□□□ 0.9
TSPAN17-201ENST00000298564 FAM177A1Q8N128 213 aaPredicted RBP20.68■□□□□ 0.9
TSPAN17-201ENST00000298564 MRFAP1L1Q96HT8 127 aa20.68■□□□□ 0.9
TSPAN17-201ENST00000298564 ITGB4P16144 1822 aa20.67■□□□□ 0.9
TSPAN17-201ENST00000298564 KLHL34Q8N239 644 aa20.67■□□□□ 0.9
TSPAN17-201ENST00000298564 ZNF274Q96GC6 653 aaPredicted RBP20.67■□□□□ 0.9
TSPAN17-201ENST00000298564 IFNKQ9P0W0 207 aa20.67■□□□□ 0.9
TSPAN17-201ENST00000298564 SYCP1Q15431 976 aa20.67■□□□□ 0.9
TSPAN17-201ENST00000298564 E4F1Q66K89 784 aaPredicted RBP20.67■□□□□ 0.9
TSPAN17-201ENST00000298564 SLU7O95391 586 aaKnown RBP20.66■□□□□ 0.9
TSPAN17-201ENST00000298564 NAA16Q6N069 864 aaPredicted RBP20.66■□□□□ 0.9
TSPAN17-201ENST00000298564 XPO4Q9C0E2 1151 aaKnown RBP20.66■□□□□ 0.9
TSPAN17-201ENST00000298564 GPAA1O43292 621 aa20.66■□□□□ 0.9
TSPAN17-201ENST00000298564 GABPB1Q06547 395 aaPredicted RBP20.66■□□□□ 0.9
TSPAN17-201ENST00000298564 DZIP3Q86Y13 1208 aaKnown RBP20.66■□□□□ 0.9
TSPAN17-201ENST00000298564 DISP2A7MBM2 1401 aa20.66■□□□□ 0.9
TSPAN17-201ENST00000298564 HSP90AA4PQ58FG1 418 aa20.65■□□□□ 0.9
TSPAN17-201ENST00000298564 SALL1Q9NSC2 1324 aa20.65■□□□□ 0.9
TSPAN17-201ENST00000298564 A0A0G2JS52 829 aa20.64■□□□□ 0.9
TSPAN17-201ENST00000298564 CDC25BP30305 580 aa20.64■□□□□ 0.9
TSPAN17-201ENST00000298564 NDUFA8P51970 172 aa20.64■□□□□ 0.9
TSPAN17-201ENST00000298564 ARMCX5Q6P1M9 558 aa20.64■□□□□ 0.9
TSPAN17-201ENST00000298564 SARM1Q6SZW1 724 aa20.64■□□□□ 0.9
TSPAN17-201ENST00000298564 ILDR1Q86SU0 546 aaPredicted RBP20.64■□□□□ 0.9
TSPAN17-201ENST00000298564 HOMER1Q86YM7 354 aa20.64■□□□□ 0.9
TSPAN17-201ENST00000298564 VGLL2Q8N8G2 317 aa20.64■□□□□ 0.9
TSPAN17-201ENST00000298564 PCDHA7Q9UN72 937 aa20.64■□□□□ 0.9
TSPAN17-201ENST00000298564 UBN2Q6ZU65 1347 aa20.64■□□□□ 0.9
TSPAN17-201ENST00000298564 SLC9C2Q5TAH2 1124 aa20.64■□□□□ 0.89
TSPAN17-201ENST00000298564 ERO1AQ96HE7 468 aa20.64■□□□□ 0.89
TSPAN17-201ENST00000298564 ANO10Q9NW15 660 aa20.64■□□□□ 0.89
TSPAN17-201ENST00000298564 POLR3GO15318 223 aaPredicted RBP20.63■□□□□ 0.89
TSPAN17-201ENST00000298564 PRC1O43663 620 aa20.63■□□□□ 0.89
TSPAN17-201ENST00000298564 PDE8AO60658 829 aa20.63■□□□□ 0.89
TSPAN17-201ENST00000298564 PDE8BO95263 885 aa20.63■□□□□ 0.89
TSPAN17-201ENST00000298564 LMOD1P29536 600 aaPredicted RBP20.63■□□□□ 0.89
TSPAN17-201ENST00000298564 CEP57L1Q8IYX8 460 aa20.63■□□□□ 0.89
TSPAN17-201ENST00000298564 HELBQ8NG08 1087 aaPredicted RBP20.63■□□□□ 0.89
TSPAN17-201ENST00000298564 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.63■□□□□ 0.89
TSPAN17-201ENST00000298564 RCOR1Q9UKL0 485 aa20.63■□□□□ 0.89
TSPAN17-201ENST00000298564 ZNF213O14771 459 aa20.63■□□□□ 0.89
TSPAN17-201ENST00000298564 PPP1R13BQ96KQ4 1090 aa20.63■□□□□ 0.89
TSPAN17-201ENST00000298564 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.63■□□□□ 0.89
TSPAN17-201ENST00000298564 FDPSP14324 419 aaKnown RBP20.63■□□□□ 0.89
TSPAN17-201ENST00000298564 ENGASEQ8NFI3 743 aa20.63■□□□□ 0.89
TSPAN17-201ENST00000298564 TMEM51Q9NW97 253 aa20.63■□□□□ 0.89
TSPAN17-201ENST00000298564 IDH1O75874 414 aaKnown RBP20.62■□□□□ 0.89
TSPAN17-201ENST00000298564 FAM160A1Q05DH4 1040 aa20.62■□□□□ 0.89
TSPAN17-201ENST00000298564 PIH1D3Q9NQM4 214 aaKnown RBP20.62■□□□□ 0.89
TSPAN17-201ENST00000298564 CLIC4Q9Y696 253 aa20.62■□□□□ 0.89
TSPAN17-201ENST00000298564 ABCC12Q96J65 1359 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms