RNA–Protein interactions for RNA: ENST00000297792.9

KDM1B-201, Transcript of lysine demethylase 1B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene KDM1B, Length 3,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-201ENST00000297792 SYNE4Q8N205 404 aa16.6■□□□□ 0.25
KDM1B-201ENST00000297792 HELLSQ9NRZ9 838 aa16.6■□□□□ 0.25
KDM1B-201ENST00000297792 UBE2Q2LH0YL09 131 aa16.6■□□□□ 0.25
KDM1B-201ENST00000297792 RBM6P78332 1123 aaKnown RBP16.6■□□□□ 0.25
KDM1B-201ENST00000297792 ZMYM1Q5SVZ6 1142 aa16.6■□□□□ 0.25
KDM1B-201ENST00000297792 CCDC150Q8NCX0 1101 aa16.6■□□□□ 0.25
KDM1B-201ENST00000297792 FAM89AQ96GI7 184 aa16.6■□□□□ 0.25
KDM1B-201ENST00000297792 TMEM232C9JQI7 657 aa16.59■□□□□ 0.25
KDM1B-201ENST00000297792 KARSQ15046 597 aaKnown RBP16.59■□□□□ 0.25
KDM1B-201ENST00000297792 CNNM3Q8NE01 707 aa16.59■□□□□ 0.25
KDM1B-201ENST00000297792 CHMP4CQ96CF2 233 aa16.59■□□□□ 0.25
KDM1B-201ENST00000297792 NOL10Q9BSC4 688 aaKnown RBP16.59■□□□□ 0.25
KDM1B-201ENST00000297792 MEGF6O75095 1541 aa16.59■□□□□ 0.25
KDM1B-201ENST00000297792 HEG1Q9ULI3 1381 aa16.59■□□□□ 0.25
KDM1B-201ENST00000297792 GNG11P61952 73 aa16.59■□□□□ 0.25
KDM1B-201ENST00000297792 SCARF1Q14162 830 aa16.59■□□□□ 0.25
KDM1B-201ENST00000297792 DSCC1Q9BVC3 393 aa16.59■□□□□ 0.25
KDM1B-201ENST00000297792 PUS7LQ9H0K6 701 aaKnown RBP16.59■□□□□ 0.25
KDM1B-201ENST00000297792 ALDH8A1Q9H2A2 487 aaPredicted RBP16.59■□□□□ 0.25
KDM1B-201ENST00000297792 EXOSC10Q01780 885 aaKnown RBP16.59■□□□□ 0.25
KDM1B-201ENST00000297792 TMCO3Q6UWJ1 677 aa16.59■□□□□ 0.25
KDM1B-201ENST00000297792 CMTR1Q8N1G2 835 aaKnown RBP16.59■□□□□ 0.25
KDM1B-201ENST00000297792 IL15P40933 162 aaPredicted RBP16.58■□□□□ 0.25
KDM1B-201ENST00000297792 METAP2P50579 478 aaKnown RBP eCLIP16.58■□□□□ 0.25
KDM1B-201ENST00000297792 HSPA2P54652 639 aa16.58■□□□□ 0.25
KDM1B-201ENST00000297792 FBXO18Q8NFZ0 1043 aa16.58■□□□□ 0.25
KDM1B-201ENST00000297792 NCOA7Q8NI08 942 aa16.58■□□□□ 0.25
KDM1B-201ENST00000297792 RTEL1Q9NZ71 1219 aa16.58■□□□□ 0.25
KDM1B-201ENST00000297792 UTYO14607 1347 aa16.58■□□□□ 0.25
KDM1B-201ENST00000297792 EYA2O00167 538 aa16.58■□□□□ 0.24
KDM1B-201ENST00000297792 TOM1L2Q6ZVM7 507 aa16.58■□□□□ 0.24
KDM1B-201ENST00000297792 DESI2Q9BSY9 194 aa16.58■□□□□ 0.24
KDM1B-201ENST00000297792 B4E1Z4 1266 aa16.58■□□□□ 0.24
KDM1B-201ENST00000297792 WDHD1O75717 1129 aaPredicted RBP16.58■□□□□ 0.24
KDM1B-201ENST00000297792 ZKSCAN3Q9BRR0 538 aa16.58■□□□□ 0.24
KDM1B-201ENST00000297792 FANCLQ9NW38 375 aa16.58■□□□□ 0.24
KDM1B-201ENST00000297792 CLCN6P51797 869 aa16.57■□□□□ 0.24
KDM1B-201ENST00000297792 TERF2Q15554 542 aa16.57■□□□□ 0.24
KDM1B-201ENST00000297792 ATG9AQ7Z3C6 839 aa16.57■□□□□ 0.24
KDM1B-201ENST00000297792 XAGE2Q96GT9 111 aa16.57■□□□□ 0.24
KDM1B-201ENST00000297792 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.57■□□□□ 0.24
KDM1B-201ENST00000297792 SH3TC1Q8TE82 1336 aa16.57■□□□□ 0.24
KDM1B-201ENST00000297792 GPAA1O43292 621 aa16.57■□□□□ 0.24
KDM1B-201ENST00000297792 ADKP55263 362 aaKnown RBP16.57■□□□□ 0.24
KDM1B-201ENST00000297792 NLRP12P59046 1061 aa16.57■□□□□ 0.24
KDM1B-201ENST00000297792 CPLX2Q6PUV4 134 aaKnown RBP16.57■□□□□ 0.24
KDM1B-201ENST00000297792 VPS37DQ86XT2 251 aa16.57■□□□□ 0.24
KDM1B-201ENST00000297792 ZNF274Q96GC6 653 aaPredicted RBP16.57■□□□□ 0.24
KDM1B-201ENST00000297792 SLC26A6Q9BXS9 759 aa16.57■□□□□ 0.24
KDM1B-201ENST00000297792 ARGLU1Q9NWB6 273 aaPredicted RBP16.57■□□□□ 0.24
KDM1B-201ENST00000297792 FOXN1O15353 648 aa16.57■□□□□ 0.24
KDM1B-201ENST00000297792 METTL24Q5JXM2 366 aa16.57■□□□□ 0.24
KDM1B-201ENST00000297792 PLBD2Q8NHP8 589 aa16.57■□□□□ 0.24
KDM1B-201ENST00000297792 C19orf44Q9H6X5 657 aa16.57■□□□□ 0.24
KDM1B-201ENST00000297792 MROH7-TTC4A0A0A0MT08 1334 aa16.56■□□□□ 0.24
KDM1B-201ENST00000297792 SLFN14P0C7P3 912 aa16.56■□□□□ 0.24
KDM1B-201ENST00000297792 LRP10Q7Z4F1 713 aa16.56■□□□□ 0.24
KDM1B-201ENST00000297792 HELBQ8NG08 1087 aaPredicted RBP16.56■□□□□ 0.24
KDM1B-201ENST00000297792 MED1Q15648 1581 aaPredicted RBP16.56■□□□□ 0.24
KDM1B-201ENST00000297792 KDM3BQ7LBC6 1761 aa16.56■□□□□ 0.24
KDM1B-201ENST00000297792 RGPD5Q99666 1765 aa16.56■□□□□ 0.24
KDM1B-201ENST00000297792 GABPB1Q06547 395 aaPredicted RBP16.56■□□□□ 0.24
KDM1B-201ENST00000297792 SLC9C2Q5TAH2 1124 aa16.56■□□□□ 0.24
KDM1B-201ENST00000297792 NUP133Q8WUM0 1156 aa16.56■□□□□ 0.24
KDM1B-201ENST00000297792 KIF2AO00139 706 aaPredicted RBP16.56■□□□□ 0.24
KDM1B-201ENST00000297792 BMS1Q14692 1282 aaKnown RBP16.56■□□□□ 0.24
KDM1B-201ENST00000297792 GRAMD1CQ8IYS0 662 aa16.56■□□□□ 0.24
KDM1B-201ENST00000297792 CNNM1Q9NRU3 951 aa16.56■□□□□ 0.24
KDM1B-201ENST00000297792 MORC2Q9Y6X9 1032 aaPredicted RBP16.56■□□□□ 0.24
KDM1B-201ENST00000297792 SENP2Q9HC62 589 aa16.55■□□□□ 0.24
KDM1B-201ENST00000297792 VGLL3A8MV65 326 aa16.55■□□□□ 0.24
KDM1B-201ENST00000297792 ZNF446Q9NWS9 450 aa16.55■□□□□ 0.24
KDM1B-201ENST00000297792 COBLO75128 1261 aa16.55■□□□□ 0.24
KDM1B-201ENST00000297792 KRT40Q6A162 431 aa16.55■□□□□ 0.24
KDM1B-201ENST00000297792 DCAF5Q96JK2 942 aa16.55■□□□□ 0.24
KDM1B-201ENST00000297792 STX17P56962 302 aa16.54■□□□□ 0.24
KDM1B-201ENST00000297792 FOXO4P98177 505 aa16.54■□□□□ 0.24
KDM1B-201ENST00000297792 MYL5Q02045 173 aa16.54■□□□□ 0.24
KDM1B-201ENST00000297792 KIF23Q02241 960 aaPredicted RBP16.54■□□□□ 0.24
KDM1B-201ENST00000297792 ZCCHC17Q9NP64 241 aaKnown RBP16.54■□□□□ 0.24
KDM1B-201ENST00000297792 LZTFL1Q9NQ48 299 aa16.54■□□□□ 0.24
KDM1B-201ENST00000297792 EVCP57679 992 aa16.54■□□□□ 0.24
KDM1B-201ENST00000297792 NEK11Q8NG66 645 aa16.54■□□□□ 0.24
KDM1B-201ENST00000297792 PRDM11Q9NQV5 511 aa16.54■□□□□ 0.24
KDM1B-201ENST00000297792 KCNJ14Q9UNX9 436 aa16.54■□□□□ 0.24
KDM1B-201ENST00000297792 CCDC66A2RUB6 948 aa16.54■□□□□ 0.24
KDM1B-201ENST00000297792 GOLGA8AA7E2F4 631 aa16.54■□□□□ 0.24
KDM1B-201ENST00000297792 ETF1P62495 437 aaKnown RBP16.54■□□□□ 0.24
KDM1B-201ENST00000297792 SYCP1Q15431 976 aa16.54■□□□□ 0.24
KDM1B-201ENST00000297792 IARSP41252 1262 aaKnown RBP16.53■□□□□ 0.24
KDM1B-201ENST00000297792 GYS2P54840 703 aa16.53■□□□□ 0.24
KDM1B-201ENST00000297792 LRRFIP1Q32MZ4 808 aaKnown RBP16.53■□□□□ 0.24
KDM1B-201ENST00000297792 SKIDA1Q1XH10 827 aa16.53■□□□□ 0.24
KDM1B-201ENST00000297792 IMPACTQ9P2X3 320 aa16.53■□□□□ 0.24
KDM1B-201ENST00000297792 YEATS4O95619 227 aa16.53■□□□□ 0.24
KDM1B-201ENST00000297792 RABL6Q3YEC7 729 aaPredicted RBP16.53■□□□□ 0.24
KDM1B-201ENST00000297792 JMYQ8N9B5 988 aa16.53■□□□□ 0.24
KDM1B-201ENST00000297792 PCDHA5Q9Y5H7 936 aa16.53■□□□□ 0.24
KDM1B-201ENST00000297792 PES1O00541 588 aaKnown RBP16.52■□□□□ 0.24
KDM1B-201ENST00000297792 CASQ1P31415 396 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms