RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 GGA1Q9UJY5 639 aa18.47■□□□□ 0.55
LSM6-201ENST00000296581 ATP6V0A2Q9Y487 856 aa18.47■□□□□ 0.55
LSM6-201ENST00000296581 IGSF3O75054 1194 aa18.46■□□□□ 0.55
LSM6-201ENST00000296581 UFL1O94874 794 aa18.46■□□□□ 0.55
LSM6-201ENST00000296581 CYP7A1P22680 504 aa18.46■□□□□ 0.55
LSM6-201ENST00000296581 TOB2Q14106 344 aaPredicted RBP18.46■□□□□ 0.55
LSM6-201ENST00000296581 TMED8Q6PL24 325 aaPredicted RBP18.46■□□□□ 0.55
LSM6-201ENST00000296581 ZNF804AQ7Z570 1209 aa18.46■□□□□ 0.55
LSM6-201ENST00000296581 DEFB132Q7Z7B7 95 aa18.46■□□□□ 0.55
LSM6-201ENST00000296581 CCDC88AQ3V6T2 1871 aa18.46■□□□□ 0.55
LSM6-201ENST00000296581 PATL2C9JE40 543 aaKnown RBP18.46■□□□□ 0.54
LSM6-201ENST00000296581 LARGE1O95461 756 aa18.46■□□□□ 0.54
LSM6-201ENST00000296581 GNAT2P19087 354 aa18.46■□□□□ 0.54
LSM6-201ENST00000296581 ALDH1B1P30837 517 aa18.46■□□□□ 0.54
LSM6-201ENST00000296581 NUCB2P80303 420 aa18.46■□□□□ 0.54
LSM6-201ENST00000296581 DHX32Q7L7V1 743 aaKnown RBP18.46■□□□□ 0.54
LSM6-201ENST00000296581 MASTLQ96GX5 879 aa18.46■□□□□ 0.54
LSM6-201ENST00000296581 TCEANC2Q96MN5 208 aa18.46■□□□□ 0.54
LSM6-201ENST00000296581 ARMT1Q9H993 441 aa18.46■□□□□ 0.54
LSM6-201ENST00000296581 SALL1Q9NSC2 1324 aa18.45■□□□□ 0.54
LSM6-201ENST00000296581 KIAA1551Q9HCM1 1747 aa18.45■□□□□ 0.54
LSM6-201ENST00000296581 EXOSC10Q01780 885 aaKnown RBP18.45■□□□□ 0.54
LSM6-201ENST00000296581 ADGRA1Q86SQ6 560 aa18.45■□□□□ 0.54
LSM6-201ENST00000296581 TBC1D16Q8TBP0 767 aa18.45■□□□□ 0.54
LSM6-201ENST00000296581 LARP6Q9BRS8 491 aaKnown RBP18.45■□□□□ 0.54
LSM6-201ENST00000296581 TPCN1Q9ULQ1 816 aa18.45■□□□□ 0.54
LSM6-201ENST00000296581 RRP9O43818 475 aaKnown RBP18.44■□□□□ 0.54
LSM6-201ENST00000296581 LCORLQ8N3X6 602 aa18.44■□□□□ 0.54
LSM6-201ENST00000296581 ZNF384Q8TF68 577 aa18.44■□□□□ 0.54
LSM6-201ENST00000296581 ZNF213O14771 459 aa18.44■□□□□ 0.54
LSM6-201ENST00000296581 HSP90AA2PQ14568 343 aaPredicted RBP18.44■□□□□ 0.54
LSM6-201ENST00000296581 ME3Q16798 604 aa18.44■□□□□ 0.54
LSM6-201ENST00000296581 TNPO1Q92973 898 aaKnown RBP18.44■□□□□ 0.54
LSM6-201ENST00000296581 NSUN4Q96CB9 384 aaKnown RBP18.44■□□□□ 0.54
LSM6-201ENST00000296581 POLLQ9UGP5 575 aa18.44■□□□□ 0.54
LSM6-201ENST00000296581 DUOX1Q9NRD9 1551 aa18.44■□□□□ 0.54
LSM6-201ENST00000296581 CHAF1AQ13111 956 aaPredicted RBP18.43■□□□□ 0.54
LSM6-201ENST00000296581 GPR101Q96P66 508 aaPredicted RBP18.43■□□□□ 0.54
LSM6-201ENST00000296581 EPB41L4AQ9HCS5 686 aaPredicted RBP18.43■□□□□ 0.54
LSM6-201ENST00000296581 GSG1L2A8MUP6 293 aa18.43■□□□□ 0.54
LSM6-201ENST00000296581 APPP05067 770 aa18.43■□□□□ 0.54
LSM6-201ENST00000296581 HAND2P61296 217 aa18.43■□□□□ 0.54
LSM6-201ENST00000296581 NAA16Q6N069 864 aaPredicted RBP18.43■□□□□ 0.54
LSM6-201ENST00000296581 IFNL3Q8IZI9 196 aa18.43■□□□□ 0.54
LSM6-201ENST00000296581 WDR66Q8TBY9 1149 aa18.43■□□□□ 0.54
LSM6-201ENST00000296581 RIOK1Q9BRS2 568 aaKnown RBP18.43■□□□□ 0.54
LSM6-201ENST00000296581 AGXT2Q9BYV1 514 aa18.43■□□□□ 0.54
LSM6-201ENST00000296581 IL1R1P14778 569 aa18.42■□□□□ 0.54
LSM6-201ENST00000296581 SPTY2D1Q68D10 685 aaPredicted RBP18.42■□□□□ 0.54
LSM6-201ENST00000296581 Q6ZUG5 572 aa18.42■□□□□ 0.54
LSM6-201ENST00000296581 MIGA1Q8NAN2 632 aa18.42■□□□□ 0.54
LSM6-201ENST00000296581 NBPF3Q9H094 633 aa18.42■□□□□ 0.54
LSM6-201ENST00000296581 CD209Q9NNX6 404 aa18.42■□□□□ 0.54
LSM6-201ENST00000296581 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.42■□□□□ 0.54
LSM6-201ENST00000296581 TIAM2Q8IVF5 1701 aa18.42■□□□□ 0.54
LSM6-201ENST00000296581 MAGEB6P1A0A0J9YX57 407 aa18.42■□□□□ 0.54
LSM6-201ENST00000296581 MECOMQ03112 1051 aa18.42■□□□□ 0.54
LSM6-201ENST00000296581 ST3GAL1Q11201 340 aa18.42■□□□□ 0.54
LSM6-201ENST00000296581 STYK1Q6J9G0 422 aa18.42■□□□□ 0.54
LSM6-201ENST00000296581 C2CD5Q86YS7 1000 aa18.41■□□□□ 0.54
LSM6-201ENST00000296581 FBXL16Q8N461 479 aa18.41■□□□□ 0.54
LSM6-201ENST00000296581 SLC4A4Q9Y6R1 1079 aa18.41■□□□□ 0.54
LSM6-201ENST00000296581 CHD4Q14839 1912 aa18.41■□□□□ 0.54
LSM6-201ENST00000296581 PRKAB2O43741 272 aa18.4■□□□□ 0.54
LSM6-201ENST00000296581 PRDX5P30044 214 aa18.4■□□□□ 0.54
LSM6-201ENST00000296581 CLEC17AQ6ZS10 378 aa18.4■□□□□ 0.54
LSM6-201ENST00000296581 MB21D2Q8IYB1 491 aaPredicted RBP18.4■□□□□ 0.54
LSM6-201ENST00000296581 NAPBQ9H115 298 aa18.4■□□□□ 0.54
LSM6-201ENST00000296581 PKP1Q13835 747 aa18.4■□□□□ 0.54
LSM6-201ENST00000296581 CCDC83Q8IWF9 413 aa18.4■□□□□ 0.54
LSM6-201ENST00000296581 NCOA7Q8NI08 942 aa18.4■□□□□ 0.54
LSM6-201ENST00000296581 NACAP1Q9BZK3 213 aa18.4■□□□□ 0.54
LSM6-201ENST00000296581 WDR19Q8NEZ3 1342 aa18.4■□□□□ 0.54
LSM6-201ENST00000296581 H0YIN7 160 aa18.39■□□□□ 0.54
LSM6-201ENST00000296581 MCM4P33991 863 aa18.39■□□□□ 0.54
LSM6-201ENST00000296581 CCDC125Q86Z20 511 aa18.39■□□□□ 0.54
LSM6-201ENST00000296581 TBC1D10CQ8IV04 446 aa18.39■□□□□ 0.54
LSM6-201ENST00000296581 RRAGDQ9NQL2 400 aaPredicted RBP18.39■□□□□ 0.54
LSM6-201ENST00000296581 ZDHHC9Q9Y397 364 aa18.39■□□□□ 0.54
LSM6-201ENST00000296581 C6orf229H3BNL8 230 aa18.39■□□□□ 0.53
LSM6-201ENST00000296581 MPNDQ8N594 471 aa18.39■□□□□ 0.53
LSM6-201ENST00000296581 BRF1Q92994 677 aa18.38■□□□□ 0.53
LSM6-201ENST00000296581 PDGFDQ9GZP0 370 aaPredicted RBP18.38■□□□□ 0.53
LSM6-201ENST00000296581 JAG2Q9Y219 1238 aa18.38■□□□□ 0.53
LSM6-201ENST00000296581 NECAB1Q8N987 351 aa18.38■□□□□ 0.53
LSM6-201ENST00000296581 SLC16A10Q8TF71 515 aa18.38■□□□□ 0.53
LSM6-201ENST00000296581 ZNF622Q969S3 477 aaKnown RBP eCLIP18.38■□□□□ 0.53
LSM6-201ENST00000296581 LRRC2Q9BYS8 371 aa18.38■□□□□ 0.53
LSM6-201ENST00000296581 SLX4Q8IY92 1834 aa18.38■□□□□ 0.53
LSM6-201ENST00000296581 BRD1O95696 1058 aa18.37■□□□□ 0.53
LSM6-201ENST00000296581 MCM5P33992 734 aa18.37■□□□□ 0.53
LSM6-201ENST00000296581 DYNLL1P63167 89 aaKnown RBP18.37■□□□□ 0.53
LSM6-201ENST00000296581 RALYLQ86SE5 291 aaKnown RBP18.37■□□□□ 0.53
LSM6-201ENST00000296581 GBP4Q96PP9 640 aa18.37■□□□□ 0.53
LSM6-201ENST00000296581 SMC3Q9UQE7 1217 aa18.37■□□□□ 0.53
LSM6-201ENST00000296581 C10orf71Q711Q0 1435 aa18.37■□□□□ 0.53
LSM6-201ENST00000296581 LDHBP07195 334 aaKnown RBP18.37■□□□□ 0.53
LSM6-201ENST00000296581 TDO2P48775 406 aa18.37■□□□□ 0.53
LSM6-201ENST00000296581 DZIP1Q86YF9 867 aaKnown RBP18.37■□□□□ 0.53
LSM6-201ENST00000296581 DLEC1Q9Y238 1755 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms