RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 YEATS2Q9ULM3 1422 aa11.64□□□□□ -0.55
CLDN1-201ENST00000295522 LRRIQ3A6PVS8 624 aaPredicted RBP11.64□□□□□ -0.55
CLDN1-201ENST00000295522 ZEB2O60315 1214 aa11.64□□□□□ -0.55
CLDN1-201ENST00000295522 NEBLO76041 1014 aa11.64□□□□□ -0.55
CLDN1-201ENST00000295522 SCP2P22307 547 aa11.64□□□□□ -0.55
CLDN1-201ENST00000295522 ADALQ6DHV7 355 aa11.64□□□□□ -0.55
CLDN1-201ENST00000295522 NCAPH2Q6IBW4 605 aa11.64□□□□□ -0.55
CLDN1-201ENST00000295522 IQUBQ8NA54 791 aa11.64□□□□□ -0.55
CLDN1-201ENST00000295522 ZNF526Q8TF50 670 aaPredicted RBP11.64□□□□□ -0.55
CLDN1-201ENST00000295522 HOOK1Q9UJC3 728 aaKnown RBP11.64□□□□□ -0.55
CLDN1-201ENST00000295522 DIP2BQ9P265 1576 aa11.64□□□□□ -0.55
CLDN1-201ENST00000295522 POTEB2H3BUK9 544 aa11.63□□□□□ -0.55
CLDN1-201ENST00000295522 MMP14P50281 582 aa11.63□□□□□ -0.55
CLDN1-201ENST00000295522 DDX46Q7L014 1031 aaKnown RBP11.63□□□□□ -0.55
CLDN1-201ENST00000295522 IGSF22Q8N9C0 903 aa11.63□□□□□ -0.55
CLDN1-201ENST00000295522 NSUN7Q8NE18 718 aaKnown RBP11.63□□□□□ -0.55
CLDN1-201ENST00000295522 KAT2BQ92831 832 aa11.63□□□□□ -0.55
CLDN1-201ENST00000295522 KIAA1210Q9ULL0 1709 aa11.63□□□□□ -0.55
CLDN1-201ENST00000295522 ABCC3O15438 1527 aa11.63□□□□□ -0.55
CLDN1-201ENST00000295522 CPSF1Q10570 1443 aaKnown RBP11.63□□□□□ -0.55
CLDN1-201ENST00000295522 MAP2K7O14733 419 aa11.63□□□□□ -0.55
CLDN1-201ENST00000295522 SLC35F6Q8N357 371 aa11.63□□□□□ -0.55
CLDN1-201ENST00000295522 KCND1Q9NSA2 647 aa11.63□□□□□ -0.55
CLDN1-201ENST00000295522 CDC23Q9UJX2 597 aa11.63□□□□□ -0.55
CLDN1-201ENST00000295522 ADD1P35611 737 aaKnown RBP11.63□□□□□ -0.55
CLDN1-201ENST00000295522 STX17P56962 302 aa11.63□□□□□ -0.55
CLDN1-201ENST00000295522 NCAPHQ15003 741 aa11.63□□□□□ -0.55
CLDN1-201ENST00000295522 CWF19L2Q2TBE0 894 aaKnown RBP11.63□□□□□ -0.55
CLDN1-201ENST00000295522 CCDC148Q8NFR7 591 aa11.63□□□□□ -0.55
CLDN1-201ENST00000295522 FAM76AQ8TAV0 307 aa11.63□□□□□ -0.55
CLDN1-201ENST00000295522 EAF2Q96CJ1 260 aaPredicted RBP11.63□□□□□ -0.55
CLDN1-201ENST00000295522 CHPF2Q9P2E5 772 aa11.63□□□□□ -0.55
CLDN1-201ENST00000295522 L1RE1Q9UN81 338 aa11.63□□□□□ -0.55
CLDN1-201ENST00000295522 EXOC5O00471 708 aa11.62□□□□□ -0.55
CLDN1-201ENST00000295522 NFE2L3Q9Y4A8 694 aa11.62□□□□□ -0.55
CLDN1-201ENST00000295522 WASLO00401 505 aaPredicted RBP11.62□□□□□ -0.55
CLDN1-201ENST00000295522 ENC1O14682 589 aa11.62□□□□□ -0.55
CLDN1-201ENST00000295522 NF2P35240 595 aa11.62□□□□□ -0.55
CLDN1-201ENST00000295522 NOA1Q8NC60 698 aaKnown RBP11.62□□□□□ -0.55
CLDN1-201ENST00000295522 KCNG4Q8TDN1 519 aa11.62□□□□□ -0.55
CLDN1-201ENST00000295522 HMG20BQ9P0W2 317 aa11.62□□□□□ -0.55
CLDN1-201ENST00000295522 CCDC61Q9Y6R9 512 aa11.62□□□□□ -0.55
CLDN1-201ENST00000295522 VWDEQ8N2E2 1590 aa11.62□□□□□ -0.55
CLDN1-201ENST00000295522 GOLGA6CA6NDK9 693 aa11.62□□□□□ -0.55
CLDN1-201ENST00000295522 MYO1FO00160 1098 aa11.62□□□□□ -0.55
CLDN1-201ENST00000295522 GIGYF1O75420 1035 aaPredicted RBP11.62□□□□□ -0.55
CLDN1-201ENST00000295522 GOLGA6DP0CG33 693 aa11.62□□□□□ -0.55
CLDN1-201ENST00000295522 HAND2P61296 217 aa11.62□□□□□ -0.55
CLDN1-201ENST00000295522 LRCH2Q5VUJ6 765 aa11.62□□□□□ -0.55
CLDN1-201ENST00000295522 SPECC1LQ69YQ0 1117 aa11.62□□□□□ -0.55
CLDN1-201ENST00000295522 OTUD6BQ8N6M0 293 aa11.62□□□□□ -0.55
CLDN1-201ENST00000295522 NGDNQ8NEJ9 315 aaKnown RBP11.62□□□□□ -0.55
CLDN1-201ENST00000295522 RUFY1Q96T51 708 aa11.62□□□□□ -0.55
CLDN1-201ENST00000295522 GOLGA6AQ9NYA3 693 aa11.62□□□□□ -0.55
CLDN1-201ENST00000295522 DONSONQ9NYP3 566 aa11.62□□□□□ -0.55
CLDN1-201ENST00000295522 ATP2C2O75185 946 aa11.61□□□□□ -0.55
CLDN1-201ENST00000295522 CYP21A2P08686 494 aa11.61□□□□□ -0.55
CLDN1-201ENST00000295522 MRPS25P82663 173 aaKnown RBP11.61□□□□□ -0.55
CLDN1-201ENST00000295522 NAA16Q6N069 864 aaPredicted RBP11.61□□□□□ -0.55
CLDN1-201ENST00000295522 GUCA1BQ9UMX6 200 aa11.61□□□□□ -0.55
CLDN1-201ENST00000295522 EFCAB6Q5THR3 1501 aa11.61□□□□□ -0.55
CLDN1-201ENST00000295522 MATR3P43243 847 aaKnown RBP eCLIP11.61□□□□□ -0.55
CLDN1-201ENST00000295522 KCNJ6P48051 423 aa11.61□□□□□ -0.55
CLDN1-201ENST00000295522 GNGT1P63211 74 aa11.61□□□□□ -0.55
CLDN1-201ENST00000295522 STIM1Q13586 685 aa11.61□□□□□ -0.55
CLDN1-201ENST00000295522 ACRBPQ8NEB7 543 aa11.61□□□□□ -0.55
CLDN1-201ENST00000295522 N4BP2L2Q92802 583 aaPredicted RBP11.61□□□□□ -0.55
CLDN1-201ENST00000295522 CD248Q9HCU0 757 aa11.61□□□□□ -0.55
CLDN1-201ENST00000295522 NDUFAB1O14561 156 aa11.61□□□□□ -0.55
CLDN1-201ENST00000295522 STX10O60499 249 aa11.61□□□□□ -0.55
CLDN1-201ENST00000295522 KIRREL3Q8IZU9 778 aa11.61□□□□□ -0.55
CLDN1-201ENST00000295522 LINC00301Q8NCQ3 95 aa11.61□□□□□ -0.55
CLDN1-201ENST00000295522 KIFC2Q96AC6 838 aa11.61□□□□□ -0.55
CLDN1-201ENST00000295522 GPHNQ9NQX3 736 aaPredicted RBP11.61□□□□□ -0.55
CLDN1-201ENST00000295522 MAP3K19Q56UN5 1328 aa11.61□□□□□ -0.55
CLDN1-201ENST00000295522 GLI2P10070 1586 aa11.6□□□□□ -0.55
CLDN1-201ENST00000295522 ADGRB1O14514 1584 aa11.6□□□□□ -0.55
CLDN1-201ENST00000295522 TAF5LO75529 589 aa11.6□□□□□ -0.55
CLDN1-201ENST00000295522 ACTN3Q08043 901 aaPredicted RBP11.6□□□□□ -0.55
CLDN1-201ENST00000295522 POGZQ7Z3K3 1410 aa11.6□□□□□ -0.55
CLDN1-201ENST00000295522 CEP89Q96ST8 783 aa11.6□□□□□ -0.55
CLDN1-201ENST00000295522 KAT14Q9H8E8 782 aa11.6□□□□□ -0.55
CLDN1-201ENST00000295522 MED4Q9NPJ6 270 aa11.6□□□□□ -0.55
CLDN1-201ENST00000295522 CAMSAP1Q5T5Y3 1602 aa11.6□□□□□ -0.55
CLDN1-201ENST00000295522 MROH2AA6NES4 1674 aa11.6□□□□□ -0.55
CLDN1-201ENST00000295522 USP32Q8NFA0 1604 aa11.6□□□□□ -0.55
CLDN1-201ENST00000295522 COBLO75128 1261 aa11.6□□□□□ -0.55
CLDN1-201ENST00000295522 GGCXP38435 758 aa11.6□□□□□ -0.55
CLDN1-201ENST00000295522 ATP1A2P50993 1020 aa11.6□□□□□ -0.55
CLDN1-201ENST00000295522 POLA2Q14181 598 aa11.6□□□□□ -0.55
CLDN1-201ENST00000295522 SUGP1Q8IWZ8 645 aaKnown RBP11.6□□□□□ -0.55
CLDN1-201ENST00000295522 USHBP1Q8N6Y0 703 aa11.6□□□□□ -0.55
CLDN1-201ENST00000295522 CD163L1Q9NR16 1453 aa11.6□□□□□ -0.55
CLDN1-201ENST00000295522 AKR1B15C9JRZ8 316 aaPredicted RBP11.59□□□□□ -0.55
CLDN1-201ENST00000295522 CDR1P51861 262 aa11.59□□□□□ -0.55
CLDN1-201ENST00000295522 NEUROD6Q96NK8 337 aa11.59□□□□□ -0.55
CLDN1-201ENST00000295522 CPLX2Q6PUV4 134 aaKnown RBP11.59□□□□□ -0.55
CLDN1-201ENST00000295522 SCLT1Q96NL6 688 aa11.59□□□□□ -0.55
CLDN1-201ENST00000295522 NAPGQ99747 312 aaPredicted RBP11.59□□□□□ -0.55
CLDN1-201ENST00000295522 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms