RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 IMMTQ16891 758 aaKnown RBP13.69□□□□□ -0.22
SYNGAP1-201ENST00000293748 GIMAP7Q8NHV1 300 aa13.69□□□□□ -0.22
SYNGAP1-201ENST00000293748 TAOK3Q9H2K8 898 aa13.69□□□□□ -0.22
SYNGAP1-201ENST00000293748 ZNF831Q5JPB2 1677 aa13.69□□□□□ -0.22
SYNGAP1-201ENST00000293748 GRAPQ13588 217 aa13.69□□□□□ -0.22
SYNGAP1-201ENST00000293748 SEPT7Q16181 437 aaKnown RBP13.69□□□□□ -0.22
SYNGAP1-201ENST00000293748 SLC10A5Q5PT55 438 aa13.69□□□□□ -0.22
SYNGAP1-201ENST00000293748 DPY19L2Q6NUT2 758 aa13.69□□□□□ -0.22
SYNGAP1-201ENST00000293748 KIAA1328Q86T90 577 aa13.69□□□□□ -0.22
SYNGAP1-201ENST00000293748 GRAPLQ8TC17 118 aaPredicted RBP13.69□□□□□ -0.22
SYNGAP1-201ENST00000293748 ZMYND15Q9H091 742 aa13.69□□□□□ -0.22
SYNGAP1-201ENST00000293748 KDM3BQ7LBC6 1761 aa13.69□□□□□ -0.22
SYNGAP1-201ENST00000293748 BAG4O95429 457 aaKnown RBP13.69□□□□□ -0.22
SYNGAP1-201ENST00000293748 CCDC83Q8IWF9 413 aa13.69□□□□□ -0.22
SYNGAP1-201ENST00000293748 IL1RAPL2Q9NP60 686 aa13.69□□□□□ -0.22
SYNGAP1-201ENST00000293748 MAP4K4O95819 1239 aaPredicted RBP13.69□□□□□ -0.22
SYNGAP1-201ENST00000293748 CAMK4Q16566 473 aa13.69□□□□□ -0.22
SYNGAP1-201ENST00000293748 BEND3Q5T5X7 828 aa13.69□□□□□ -0.22
SYNGAP1-201ENST00000293748 TAF4BQ92750 862 aa13.69□□□□□ -0.22
SYNGAP1-201ENST00000293748 KIF1BPQ96EK5 621 aa13.69□□□□□ -0.22
SYNGAP1-201ENST00000293748 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.69□□□□□ -0.223e-27■■■■■ 503.1
SYNGAP1-201ENST00000293748 AMIGO3Q86WK7 504 aa13.68□□□□□ -0.22
SYNGAP1-201ENST00000293748 JARID2Q92833 1246 aaPredicted RBP13.68□□□□□ -0.22
SYNGAP1-201ENST00000293748 PAPPAQ13219 1627 aa13.68□□□□□ -0.22
SYNGAP1-201ENST00000293748 EIF6P56537 245 aaKnown RBP13.68□□□□□ -0.22
SYNGAP1-201ENST00000293748 BMP2KLQ5H9B9 411 aa13.68□□□□□ -0.22
SYNGAP1-201ENST00000293748 LMBR1LQ6UX01 489 aa13.68□□□□□ -0.22
SYNGAP1-201ENST00000293748 C16orf71Q8IYS4 520 aaPredicted RBP13.68□□□□□ -0.22
SYNGAP1-201ENST00000293748 NSFL1CQ9UNZ2 370 aaKnown RBP13.68□□□□□ -0.22
SYNGAP1-201ENST00000293748 POTEB2H3BUK9 544 aa13.68□□□□□ -0.22
SYNGAP1-201ENST00000293748 RAB11FIP3O75154 756 aa13.68□□□□□ -0.22
SYNGAP1-201ENST00000293748 KIF4BQ2VIQ3 1234 aa13.68□□□□□ -0.22
SYNGAP1-201ENST00000293748 PPP4R3BQ5MIZ7 849 aa13.68□□□□□ -0.22
SYNGAP1-201ENST00000293748 PRPF40BQ6NWY9 871 aaKnown RBP13.68□□□□□ -0.22
SYNGAP1-201ENST00000293748 LDHAL6AQ6ZMR3 332 aa13.68□□□□□ -0.22
SYNGAP1-201ENST00000293748 TAX1BP1Q86VP1 789 aa13.68□□□□□ -0.22
SYNGAP1-201ENST00000293748 TANGO6Q9C0B7 1094 aa13.68□□□□□ -0.22
SYNGAP1-201ENST00000293748 ZC3H12CQ9C0D7 883 aaKnown RBP13.68□□□□□ -0.22
SYNGAP1-201ENST00000293748 BMS1Q14692 1282 aaKnown RBP13.68□□□□□ -0.22
SYNGAP1-201ENST00000293748 CEP131Q9UPN4 1083 aa13.68□□□□□ -0.22
SYNGAP1-201ENST00000293748 C21orf2O43822 256 aa13.67□□□□□ -0.22
SYNGAP1-201ENST00000293748 TOP1P11387 765 aaKnown RBP13.67□□□□□ -0.22
SYNGAP1-201ENST00000293748 TRIM27P14373 513 aa13.67□□□□□ -0.22
SYNGAP1-201ENST00000293748 ENOX2Q16206 610 aaKnown RBP13.67□□□□□ -0.22
SYNGAP1-201ENST00000293748 LARGE2Q8N3Y3 721 aa13.67□□□□□ -0.22
SYNGAP1-201ENST00000293748 C16orf45Q96MC5 204 aaPredicted RBP13.67□□□□□ -0.22
SYNGAP1-201ENST00000293748 LIMCH1Q9UPQ0 1083 aa13.67□□□□□ -0.22
SYNGAP1-201ENST00000293748 NIM1KQ8IY84 436 aa13.67□□□□□ -0.22
SYNGAP1-201ENST00000293748 EXOC6BQ9Y2D4 811 aa13.67□□□□□ -0.22
SYNGAP1-201ENST00000293748 GNL3LQ9NVN8 582 aaKnown RBP13.67□□□□□ -0.22
SYNGAP1-201ENST00000293748 CEP126Q9P2H0 1117 aa13.67□□□□□ -0.22
SYNGAP1-201ENST00000293748 PAXBP1Q9Y5B6 917 aa13.67□□□□□ -0.22
SYNGAP1-201ENST00000293748 UBN2Q6ZU65 1347 aa13.67□□□□□ -0.22
SYNGAP1-201ENST00000293748 GOLGA6L9A6NEM1 432 aa13.66□□□□□ -0.22
SYNGAP1-201ENST00000293748 SRGNP10124 158 aa13.66□□□□□ -0.22
SYNGAP1-201ENST00000293748 SIL1Q9H173 461 aa13.66□□□□□ -0.22
SYNGAP1-201ENST00000293748 BMP2KQ9NSY1 1161 aaPredicted RBP13.66□□□□□ -0.22
SYNGAP1-201ENST00000293748 GGA1Q9UJY5 639 aa13.66□□□□□ -0.22
SYNGAP1-201ENST00000293748 MTMR7Q9Y216 660 aa13.66□□□□□ -0.22
SYNGAP1-201ENST00000293748 ADCY5O95622 1261 aa13.66□□□□□ -0.22
SYNGAP1-201ENST00000293748 CASQ1P31415 396 aa13.66□□□□□ -0.22
SYNGAP1-201ENST00000293748 SF3B3Q15393 1217 aaKnown RBP13.66□□□□□ -0.22
SYNGAP1-201ENST00000293748 TJP1Q07157 1748 aa13.66□□□□□ -0.22
SYNGAP1-201ENST00000293748 H7C1W4 665 aa13.66□□□□□ -0.22
SYNGAP1-201ENST00000293748 METTL24Q5JXM2 366 aa13.66□□□□□ -0.22
SYNGAP1-201ENST00000293748 DDX11Q96FC9 970 aa13.66□□□□□ -0.22
SYNGAP1-201ENST00000293748 CICQ96RK0 1608 aaPredicted RBP13.66□□□□□ -0.22
SYNGAP1-201ENST00000293748 LAMB4A4D0S4 1761 aa13.66□□□□□ -0.22
SYNGAP1-201ENST00000293748 ITGA6P23229 1130 aa13.66□□□□□ -0.22
SYNGAP1-201ENST00000293748 SKAP1Q86WV1 359 aa13.66□□□□□ -0.22
SYNGAP1-201ENST00000293748 ZNF397Q8NF99 534 aaPredicted RBP13.66□□□□□ -0.22
SYNGAP1-201ENST00000293748 NLGN2Q8NFZ4 835 aa13.66□□□□□ -0.22
SYNGAP1-201ENST00000293748 EZRP15311 586 aaKnown RBP13.65□□□□□ -0.22
SYNGAP1-201ENST00000293748 ADCY9O60503 1353 aa13.65□□□□□ -0.22
SYNGAP1-201ENST00000293748 IFIT1P09914 478 aaKnown RBP13.65□□□□□ -0.22
SYNGAP1-201ENST00000293748 MICALCLQ6ZW33 695 aa13.65□□□□□ -0.22
SYNGAP1-201ENST00000293748 U3KPZ7 1027 aaPredicted RBP13.65□□□□□ -0.22
SYNGAP1-201ENST00000293748 C10orf71Q711Q0 1435 aa13.65□□□□□ -0.22
SYNGAP1-201ENST00000293748 PPIP5K2O43314 1243 aa13.64□□□□□ -0.23
SYNGAP1-201ENST00000293748 ATP2B4P23634 1241 aa13.64□□□□□ -0.23
SYNGAP1-201ENST00000293748 UBR2Q8IWV8 1755 aa13.64□□□□□ -0.23
SYNGAP1-201ENST00000293748 IGKV5-2P06315 115 aa13.64□□□□□ -0.23
SYNGAP1-201ENST00000293748 XRCC6P12956 609 aaKnown RBP eCLIP13.64□□□□□ -0.23
SYNGAP1-201ENST00000293748 LMOD1P29536 600 aaPredicted RBP13.64□□□□□ -0.23
SYNGAP1-201ENST00000293748 SP8Q8IXZ3 490 aa13.64□□□□□ -0.23
SYNGAP1-201ENST00000293748 RNF181Q9P0P0 153 aa13.64□□□□□ -0.23
SYNGAP1-201ENST00000293748 POLR3GO15318 223 aaPredicted RBP13.64□□□□□ -0.23
SYNGAP1-201ENST00000293748 SPA17Q15506 151 aa13.64□□□□□ -0.23
SYNGAP1-201ENST00000293748 SGIP1Q9BQI5 828 aa13.64□□□□□ -0.23
SYNGAP1-201ENST00000293748 SIPA1L3O60292 1781 aaPredicted RBP13.64□□□□□ -0.23
SYNGAP1-201ENST00000293748 GTF2F1P35269 517 aaKnown RBP eCLIP13.64□□□□□ -0.231e-6■■■■□ 26.1
SYNGAP1-201ENST00000293748 IKQ13123 557 aaPredicted RBP13.64□□□□□ -0.23
SYNGAP1-201ENST00000293748 CAVIN4Q5BKX8 364 aa13.64□□□□□ -0.23
SYNGAP1-201ENST00000293748 ZHX1Q9UKY1 873 aaPredicted RBP13.64□□□□□ -0.23
SYNGAP1-201ENST00000293748 AKAP2Q9Y2D5 859 aa13.64□□□□□ -0.23
SYNGAP1-201ENST00000293748 UBE2HP62256 183 aa13.63□□□□□ -0.23
SYNGAP1-201ENST00000293748 NUP133Q8WUM0 1156 aa13.63□□□□□ -0.23
SYNGAP1-201ENST00000293748 UBAC1Q9BSL1 405 aa13.63□□□□□ -0.23
SYNGAP1-201ENST00000293748 UFL1O94874 794 aa13.63□□□□□ -0.23
SYNGAP1-201ENST00000293748 HMGB1P09429 215 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 171 ms