RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 CWC25Q9NXE8 425 aaPredicted RBP15.4■□□□□ 0.06
SCAF4-201ENST00000286835 NRKQ7Z2Y5 1582 aa15.4■□□□□ 0.06
SCAF4-201ENST00000286835 CLCN6P51797 869 aa15.4■□□□□ 0.06
SCAF4-201ENST00000286835 NLRP12P59046 1061 aa15.4■□□□□ 0.06
SCAF4-201ENST00000286835 USP42Q9H9J4 1324 aaKnown RBP15.4■□□□□ 0.06
SCAF4-201ENST00000286835 ERICH2A1L162 156 aa15.4■□□□□ 0.06
SCAF4-201ENST00000286835 ETF1P62495 437 aaKnown RBP15.4■□□□□ 0.06
SCAF4-201ENST00000286835 ZNF827Q17R98 1081 aa15.4■□□□□ 0.06
SCAF4-201ENST00000286835 MPHOSPH8Q99549 860 aa15.4■□□□□ 0.06
SCAF4-201ENST00000286835 ARFGAP3Q9NP61 516 aa15.4■□□□□ 0.06
SCAF4-201ENST00000286835 PHACTR2O75167 634 aa15.39■□□□□ 0.05
SCAF4-201ENST00000286835 DDB1Q16531 1140 aa15.39■□□□□ 0.05
SCAF4-201ENST00000286835 AK7Q96M32 723 aa15.39■□□□□ 0.05
SCAF4-201ENST00000286835 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.39■□□□□ 0.051e-7■■□□□ 12.7
SCAF4-201ENST00000286835 CDKL5O76039 1030 aa15.39■□□□□ 0.05
SCAF4-201ENST00000286835 AFMP43652 599 aa15.39■□□□□ 0.05
SCAF4-201ENST00000286835 FANCLQ9NW38 375 aa15.39■□□□□ 0.05
SCAF4-201ENST00000286835 IMPACTQ9P2X3 320 aa15.39■□□□□ 0.05
SCAF4-201ENST00000286835 CARMIL3Q8ND23 1372 aa15.39■□□□□ 0.05
SCAF4-201ENST00000286835 SARM1Q6SZW1 724 aa15.39■□□□□ 0.05
SCAF4-201ENST00000286835 KLHL34Q8N239 644 aa15.39■□□□□ 0.05
SCAF4-201ENST00000286835 TBC1D2BQ9UPU7 963 aa15.39■□□□□ 0.05
SCAF4-201ENST00000286835 RIMS1Q86UR5 1692 aaKnown RBP15.39■□□□□ 0.05
SCAF4-201ENST00000286835 IFIT3O14879 490 aaKnown RBP15.39■□□□□ 0.05
SCAF4-201ENST00000286835 LINC00301Q8NCQ3 95 aa15.39■□□□□ 0.05
SCAF4-201ENST00000286835 HELLSQ9NRZ9 838 aa15.39■□□□□ 0.05
SCAF4-201ENST00000286835 MTMR7Q9Y216 660 aa15.39■□□□□ 0.05
SCAF4-201ENST00000286835 AIDAQ96BJ3 306 aa15.38■□□□□ 0.05
SCAF4-201ENST00000286835 DCAF5Q96JK2 942 aa15.38■□□□□ 0.05
SCAF4-201ENST00000286835 COPRSQ9NQ92 184 aa15.38■□□□□ 0.05
SCAF4-201ENST00000286835 IL15P40933 162 aaPredicted RBP15.38■□□□□ 0.05
SCAF4-201ENST00000286835 SYCP1Q15431 976 aa15.38■□□□□ 0.05
SCAF4-201ENST00000286835 TMEM67Q5HYA8 995 aa15.38■□□□□ 0.05
SCAF4-201ENST00000286835 TRIM22Q8IYM9 498 aa15.38■□□□□ 0.05
SCAF4-201ENST00000286835 BAG1Q99933 345 aaPredicted RBP15.38■□□□□ 0.05
SCAF4-201ENST00000286835 E4F1Q66K89 784 aaPredicted RBP15.38■□□□□ 0.05
SCAF4-201ENST00000286835 ARMCX5Q6P1M9 558 aa15.38■□□□□ 0.05
SCAF4-201ENST00000286835 LEKR1Q6ZMV7 388 aa15.38■□□□□ 0.05
SCAF4-201ENST00000286835 PCMTD1Q96MG8 357 aaPredicted RBP15.38■□□□□ 0.05
SCAF4-201ENST00000286835 PUS3Q9BZE2 481 aaKnown RBP15.38■□□□□ 0.05
SCAF4-201ENST00000286835 ZCCHC17Q9NP64 241 aaKnown RBP15.38■□□□□ 0.05
SCAF4-201ENST00000286835 TRMT112Q9UI30 125 aaKnown RBP15.38■□□□□ 0.05
SCAF4-201ENST00000286835 MORC2Q9Y6X9 1032 aaPredicted RBP15.38■□□□□ 0.05
SCAF4-201ENST00000286835 CLTCQ00610 1675 aaKnown RBP15.37■□□□□ 0.05
SCAF4-201ENST00000286835 DHX8Q14562 1220 aaKnown RBP15.37■□□□□ 0.05
SCAF4-201ENST00000286835 SLC9C2Q5TAH2 1124 aa15.37■□□□□ 0.05
SCAF4-201ENST00000286835 B4E1Z4 1266 aa15.37■□□□□ 0.05
SCAF4-201ENST00000286835 FAM193AP78312 1265 aa15.37■□□□□ 0.05
SCAF4-201ENST00000286835 ATL3Q6DD88 541 aa15.37■□□□□ 0.05
SCAF4-201ENST00000286835 PI16Q6UXB8 463 aa15.37■□□□□ 0.05
SCAF4-201ENST00000286835 ARHGEF25Q86VW2 580 aa15.37■□□□□ 0.05
SCAF4-201ENST00000286835 LRRN4CLQ8ND94 238 aa15.37■□□□□ 0.05
SCAF4-201ENST00000286835 ZKSCAN3Q9BRR0 538 aa15.37■□□□□ 0.05
SCAF4-201ENST00000286835 JAKMIP3Q5VZ66 844 aa15.37■□□□□ 0.05
SCAF4-201ENST00000286835 PLCD3Q8N3E9 789 aa15.37■□□□□ 0.05
SCAF4-201ENST00000286835 SLC12A7Q9Y666 1083 aa15.37■□□□□ 0.05
SCAF4-201ENST00000286835 CTDNEP1O95476 244 aa15.36■□□□□ 0.05
SCAF4-201ENST00000286835 A1BGP04217 495 aa15.36■□□□□ 0.05
SCAF4-201ENST00000286835 TSR1Q2NL82 804 aaKnown RBP15.36■□□□□ 0.05
SCAF4-201ENST00000286835 FILIP1LQ4L180 1135 aa15.36■□□□□ 0.05
SCAF4-201ENST00000286835 BRAPQ7Z569 592 aa15.36■□□□□ 0.05
SCAF4-201ENST00000286835 FBXO18Q8NFZ0 1043 aa15.36■□□□□ 0.05
SCAF4-201ENST00000286835 SMARCE1Q969G3 411 aa15.36■□□□□ 0.05
SCAF4-201ENST00000286835 MAST3O60307 1309 aa15.36■□□□□ 0.05
SCAF4-201ENST00000286835 TULP1O00294 542 aaPredicted RBP15.36■□□□□ 0.05
SCAF4-201ENST00000286835 ZBTB43O43298 467 aa15.36■□□□□ 0.05
SCAF4-201ENST00000286835 GYS2P54840 703 aa15.36■□□□□ 0.05
SCAF4-201ENST00000286835 PPP2R3AQ06190 1150 aa15.36■□□□□ 0.05
SCAF4-201ENST00000286835 KRBA2Q6ZNG9 492 aa15.36■□□□□ 0.05
SCAF4-201ENST00000286835 FMR1NBQ8N0W7 255 aaPredicted RBP15.36■□□□□ 0.05
SCAF4-201ENST00000286835 RTEL1Q9NZ71 1219 aa15.36■□□□□ 0.05
SCAF4-201ENST00000286835 M0R2C6 588 aa15.36■□□□□ 0.05
SCAF4-201ENST00000286835 FGAP02671 866 aa15.36■□□□□ 0.05
SCAF4-201ENST00000286835 RHOXF2BP0C7M4 288 aa15.36■□□□□ 0.05
SCAF4-201ENST00000286835 OAS2P29728 719 aaKnown RBP15.36■□□□□ 0.05
SCAF4-201ENST00000286835 TDO2P48775 406 aa15.36■□□□□ 0.05
SCAF4-201ENST00000286835 RBM6P78332 1123 aaKnown RBP15.36■□□□□ 0.05
SCAF4-201ENST00000286835 RHOXF2Q9BQY4 288 aa15.36■□□□□ 0.05
SCAF4-201ENST00000286835 KIF5CO60282 957 aa15.36■□□□□ 0.05
SCAF4-201ENST00000286835 IFIT5Q13325 482 aaKnown RBP15.36■□□□□ 0.05
SCAF4-201ENST00000286835 LDHAL6AQ6ZMR3 332 aa15.36■□□□□ 0.05
SCAF4-201ENST00000286835 ZNF274Q96GC6 653 aaPredicted RBP15.36■□□□□ 0.05
SCAF4-201ENST00000286835 DSCC1Q9BVC3 393 aa15.36■□□□□ 0.05
SCAF4-201ENST00000286835 CWC15Q9P013 229 aaKnown RBP15.36■□□□□ 0.05
SCAF4-201ENST00000286835 SLFN14P0C7P3 912 aa15.35■□□□□ 0.05
SCAF4-201ENST00000286835 KRT40Q6A162 431 aa15.35■□□□□ 0.05
SCAF4-201ENST00000286835 KCNB2Q92953 911 aa15.35■□□□□ 0.05
SCAF4-201ENST00000286835 OSBP2Q969R2 916 aa15.35■□□□□ 0.05
SCAF4-201ENST00000286835 SLC52A2Q9HAB3 445 aa15.35■□□□□ 0.05
SCAF4-201ENST00000286835 KCNH3Q9ULD8 1083 aa15.35■□□□□ 0.05
SCAF4-201ENST00000286835 NFE2L3Q9Y4A8 694 aa15.35■□□□□ 0.05
SCAF4-201ENST00000286835 TMEM232C9JQI7 657 aa15.35■□□□□ 0.05
SCAF4-201ENST00000286835 PNMA6AP0CW24 399 aaPredicted RBP15.35■□□□□ 0.05
SCAF4-201ENST00000286835 ZAP70P43403 619 aa15.35■□□□□ 0.05
SCAF4-201ENST00000286835 TTLL7Q6ZT98 887 aa15.35■□□□□ 0.05
SCAF4-201ENST00000286835 C10orf67Q8IYJ2 551 aa15.35■□□□□ 0.05
SCAF4-201ENST00000286835 CMTR1Q8N1G2 835 aaKnown RBP15.35■□□□□ 0.05
SCAF4-201ENST00000286835 TRIM34Q9BYJ4 488 aa15.35■□□□□ 0.05
SCAF4-201ENST00000286835 NAPBQ9H115 298 aa15.35■□□□□ 0.05
SCAF4-201ENST00000286835 MED23Q9ULK4 1368 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms