RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 FAM227BQ96M60 508 aa18.56■□□□□ 0.56
SH3RF1-201ENST00000284637 UGGT2Q9NYU1 1516 aa18.56■□□□□ 0.56
SH3RF1-201ENST00000284637 FANCCQ00597 558 aa18.56■□□□□ 0.56
SH3RF1-201ENST00000284637 FMNL3Q8IVF7 1028 aa18.56■□□□□ 0.56
SH3RF1-201ENST00000284637 LEO1Q8WVC0 666 aaPredicted RBP18.56■□□□□ 0.56
SH3RF1-201ENST00000284637 TMEM110-MUSTN1A8MSY1 372 aa18.56■□□□□ 0.56
SH3RF1-201ENST00000284637 NDUFAB1O14561 156 aa18.56■□□□□ 0.56
SH3RF1-201ENST00000284637 CFAP58Q5T655 872 aa18.56■□□□□ 0.56
SH3RF1-201ENST00000284637 WDR78Q5VTH9 848 aa18.56■□□□□ 0.56
SH3RF1-201ENST00000284637 MAGEB6Q8N7X4 407 aa18.56■□□□□ 0.56
SH3RF1-201ENST00000284637 SGSM2O43147 1006 aa18.55■□□□□ 0.56
SH3RF1-201ENST00000284637 CALML3P27482 149 aa18.55■□□□□ 0.56
SH3RF1-201ENST00000284637 VPS16Q9H269 839 aa18.55■□□□□ 0.56
SH3RF1-201ENST00000284637 BICDL2A1A5D9 508 aa18.55■□□□□ 0.56
SH3RF1-201ENST00000284637 A0A1W2PP64 1363 aa18.55■□□□□ 0.56
SH3RF1-201ENST00000284637 BICD1Q96G01 975 aa18.55■□□□□ 0.56
SH3RF1-201ENST00000284637 MRVI1Q9Y6F6 885 aa18.55■□□□□ 0.56
SH3RF1-201ENST00000284637 IBTKQ9P2D0 1353 aaPredicted RBP18.55■□□□□ 0.56
SH3RF1-201ENST00000284637 MAGEB6P1A0A0J9YX57 407 aa18.55■□□□□ 0.56
SH3RF1-201ENST00000284637 TIMM10P62072 90 aa18.55■□□□□ 0.56
SH3RF1-201ENST00000284637 TUBB2AQ13885 445 aa18.55■□□□□ 0.56
SH3RF1-201ENST00000284637 ZNF174Q15697 407 aa18.55■□□□□ 0.56
SH3RF1-201ENST00000284637 KRT79Q5XKE5 535 aa18.55■□□□□ 0.56
SH3RF1-201ENST00000284637 GOLGA5Q8TBA6 731 aa18.55■□□□□ 0.56
SH3RF1-201ENST00000284637 TUBB2BQ9BVA1 445 aa18.55■□□□□ 0.56
SH3RF1-201ENST00000284637 ZNF215Q9UL58 517 aaPredicted RBP18.55■□□□□ 0.56
SH3RF1-201ENST00000284637 WDHD1O75717 1129 aaPredicted RBP18.54■□□□□ 0.56
SH3RF1-201ENST00000284637 ANO1Q5XXA6 986 aa18.54■□□□□ 0.56
SH3RF1-201ENST00000284637 CCDC50Q8IVM0 306 aa18.54■□□□□ 0.56
SH3RF1-201ENST00000284637 KLHDC4Q8TBB5 520 aa18.54■□□□□ 0.56
SH3RF1-201ENST00000284637 CCDC77Q9BR77 488 aa18.54■□□□□ 0.56
SH3RF1-201ENST00000284637 GJC1P36383 396 aa18.54■□□□□ 0.56
SH3RF1-201ENST00000284637 LMBR1Q8WVP7 490 aa18.54■□□□□ 0.56
SH3RF1-201ENST00000284637 ARHGAP25P42331 645 aa18.54■□□□□ 0.56
SH3RF1-201ENST00000284637 DTHD1Q6ZMT9 781 aa18.54■□□□□ 0.56
SH3RF1-201ENST00000284637 CERS3Q8IU89 383 aa18.54■□□□□ 0.56
SH3RF1-201ENST00000284637 KCNH3Q9ULD8 1083 aa18.54■□□□□ 0.56
SH3RF1-201ENST00000284637 TRIM35Q9UPQ4 493 aa18.54■□□□□ 0.56
SH3RF1-201ENST00000284637 ZMYM3Q14202 1370 aa18.54■□□□□ 0.56
SH3RF1-201ENST00000284637 CDC37L1Q7L3B6 337 aa18.53■□□□□ 0.56
SH3RF1-201ENST00000284637 ANTXR1Q9H6X2 564 aa18.53■□□□□ 0.56
SH3RF1-201ENST00000284637 C6orf50Q9HD87 102 aa18.53■□□□□ 0.56
SH3RF1-201ENST00000284637 TNNI2P48788 182 aa18.53■□□□□ 0.56
SH3RF1-201ENST00000284637 IQCGQ9H095 443 aaKnown RBP18.53■□□□□ 0.56
SH3RF1-201ENST00000284637 MAPK8IP1Q9UQF2 711 aa18.53■□□□□ 0.56
SH3RF1-201ENST00000284637 PNMA6EA0A0J9YXQ4 647 aa18.53■□□□□ 0.56
SH3RF1-201ENST00000284637 CALM1P0DP23 149 aa18.53■□□□□ 0.56
SH3RF1-201ENST00000284637 CALM2P0DP24 149 aa18.53■□□□□ 0.56
SH3RF1-201ENST00000284637 CALM3P0DP25 149 aa18.53■□□□□ 0.56
SH3RF1-201ENST00000284637 MXRA7P84157 204 aa18.53■□□□□ 0.56
SH3RF1-201ENST00000284637 ZCRB1Q8TBF4 217 aaKnown RBP18.53■□□□□ 0.56
SH3RF1-201ENST00000284637 CTNND2Q9UQB3 1225 aa18.52■□□□□ 0.56
SH3RF1-201ENST00000284637 FLT4P35916 1363 aa18.52■□□□□ 0.56
SH3RF1-201ENST00000284637 RTL9Q8NET4 1388 aa18.52■□□□□ 0.56
SH3RF1-201ENST00000284637 NCKAP5LQ9HCH0 1330 aa18.52■□□□□ 0.56
SH3RF1-201ENST00000284637 PRPHP41219 470 aa18.52■□□□□ 0.56
SH3RF1-201ENST00000284637 NBPF6Q5VWK0 638 aa18.52■□□□□ 0.56
SH3RF1-201ENST00000284637 CCDC25Q86WR0 208 aa18.52■□□□□ 0.56
SH3RF1-201ENST00000284637 NBPF5PQ86XG9 351 aaPredicted RBP18.52■□□□□ 0.56
SH3RF1-201ENST00000284637 NBPF4Q96M43 638 aa18.52■□□□□ 0.56
SH3RF1-201ENST00000284637 GSTO1P78417 241 aa18.52■□□□□ 0.56
SH3RF1-201ENST00000284637 ZNF526Q8TF50 670 aaPredicted RBP18.52■□□□□ 0.56
SH3RF1-201ENST00000284637 NAPGQ99747 312 aaPredicted RBP18.52■□□□□ 0.56
SH3RF1-201ENST00000284637 IMPACTQ9P2X3 320 aa18.52■□□□□ 0.56
SH3RF1-201ENST00000284637 MAP3K5Q99683 1374 aa18.52■□□□□ 0.55
SH3RF1-201ENST00000284637 B4E1Z4 1266 aa18.51■□□□□ 0.55
SH3RF1-201ENST00000284637 CCDC97Q96F63 343 aaPredicted RBP18.51■□□□□ 0.55
SH3RF1-201ENST00000284637 DBNDD2Q9BQY9 259 aa18.51■□□□□ 0.55
SH3RF1-201ENST00000284637 RABEP2Q9H5N1 569 aa18.51■□□□□ 0.55
SH3RF1-201ENST00000284637 MCM9Q9NXL9 1143 aa18.51■□□□□ 0.55
SH3RF1-201ENST00000284637 F8W031 263 aaPredicted RBP18.51■□□□□ 0.55
SH3RF1-201ENST00000284637 DNAI2Q9GZS0 605 aa18.51■□□□□ 0.55
SH3RF1-201ENST00000284637 GNAT2P19087 354 aa18.51■□□□□ 0.55
SH3RF1-201ENST00000284637 TBC1D8BQ0IIM8 1120 aa18.51■□□□□ 0.55
SH3RF1-201ENST00000284637 ERCC6LQ2NKX8 1250 aa18.51■□□□□ 0.55
SH3RF1-201ENST00000284637 STMN4Q9H169 189 aaPredicted RBP18.51■□□□□ 0.55
SH3RF1-201ENST00000284637 HELLSQ9NRZ9 838 aa18.51■□□□□ 0.55
SH3RF1-201ENST00000284637 CEP83Q9Y592 693 aa18.51■□□□□ 0.55
SH3RF1-201ENST00000284637 BRD1O95696 1058 aa18.51■□□□□ 0.55
SH3RF1-201ENST00000284637 ZBTB16Q05516 673 aa18.51■□□□□ 0.55
SH3RF1-201ENST00000284637 LRCH2Q5VUJ6 765 aa18.51■□□□□ 0.55
SH3RF1-201ENST00000284637 GSTA5Q7RTV2 222 aa18.51■□□□□ 0.55
SH3RF1-201ENST00000284637 TNNC1P63316 161 aa18.5■□□□□ 0.55
SH3RF1-201ENST00000284637 PICALMQ13492 652 aa18.5■□□□□ 0.55
SH3RF1-201ENST00000284637 ZMYM4Q5VZL5 1548 aa18.5■□□□□ 0.55
SH3RF1-201ENST00000284637 HPDP32754 393 aaPredicted RBP18.5■□□□□ 0.55
SH3RF1-201ENST00000284637 GPR161Q8N6U8 529 aaKnown RBP18.5■□□□□ 0.55
SH3RF1-201ENST00000284637 POLR2DO15514 142 aaKnown RBP18.5■□□□□ 0.55
SH3RF1-201ENST00000284637 JAK2O60674 1132 aa18.5■□□□□ 0.55
SH3RF1-201ENST00000284637 PLCB3Q01970 1234 aa18.5■□□□□ 0.55
SH3RF1-201ENST00000284637 RILPL1Q5EBL4 403 aa18.5■□□□□ 0.55
SH3RF1-201ENST00000284637 ZNF202O95125 648 aa18.5■□□□□ 0.55
SH3RF1-201ENST00000284637 RNASE9P60153 205 aaKnown RBP18.5■□□□□ 0.55
SH3RF1-201ENST00000284637 SF3B2Q13435 895 aaKnown RBP18.5■□□□□ 0.55
SH3RF1-201ENST00000284637 UBLCP1Q8WVY7 318 aaPredicted RBP18.5■□□□□ 0.55
SH3RF1-201ENST00000284637 DDX12PQ92771 950 aa18.5■□□□□ 0.55
SH3RF1-201ENST00000284637 NDUFB9Q9Y6M9 179 aa18.5■□□□□ 0.55
SH3RF1-201ENST00000284637 SYNCQ9H7C4 482 aa18.49■□□□□ 0.55
SH3RF1-201ENST00000284637 GOLGA6CA6NDK9 693 aa18.49■□□□□ 0.55
SH3RF1-201ENST00000284637 GOLGA6DP0CG33 693 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms