RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 GOLGA8FQ08AF8 430 aa19.8■□□□□ 0.76
SPG7-201ENST00000268704 GOLGA8DPQ0D2H9 430 aa19.8■□□□□ 0.76
SPG7-201ENST00000268704 ZNF446Q9NWS9 450 aa19.8■□□□□ 0.76
SPG7-201ENST00000268704 GORABQ5T7V8 394 aa19.79■□□□□ 0.76
SPG7-201ENST00000268704 KCNG4Q8TDN1 519 aa19.79■□□□□ 0.76
SPG7-201ENST00000268704 SLFN14P0C7P3 912 aa19.79■□□□□ 0.76
SPG7-201ENST00000268704 PUS7LQ9H0K6 701 aaKnown RBP19.79■□□□□ 0.76
SPG7-201ENST00000268704 POLR3EQ9NVU0 708 aa19.79■□□□□ 0.76
SPG7-201ENST00000268704 CPLX1O14810 134 aa19.79■□□□□ 0.76
SPG7-201ENST00000268704 AXDND1Q5T1B0 1012 aaPredicted RBP19.78■□□□□ 0.76
SPG7-201ENST00000268704 KRT222Q8N1A0 295 aa19.78■□□□□ 0.76
SPG7-201ENST00000268704 IMPACTQ9P2X3 320 aa19.78■□□□□ 0.76
SPG7-201ENST00000268704 IMMTQ16891 758 aaKnown RBP19.78■□□□□ 0.76
SPG7-201ENST00000268704 SYNE3Q6ZMZ3 975 aa19.78■□□□□ 0.76
SPG7-201ENST00000268704 DPF2Q92785 391 aa19.78■□□□□ 0.76
SPG7-201ENST00000268704 KIF1AQ12756 1690 aa19.78■□□□□ 0.76
SPG7-201ENST00000268704 NLRP12P59046 1061 aa19.77■□□□□ 0.76
SPG7-201ENST00000268704 ANO1Q5XXA6 986 aa19.77■□□□□ 0.76
SPG7-201ENST00000268704 MB21D2Q8IYB1 491 aaPredicted RBP19.77■□□□□ 0.76
SPG7-201ENST00000268704 HSD3B7Q9H2F3 369 aa19.77■□□□□ 0.76
SPG7-201ENST00000268704 GLI3P10071 1580 aa19.77■□□□□ 0.76
SPG7-201ENST00000268704 TJP1Q07157 1748 aa19.77■□□□□ 0.76
SPG7-201ENST00000268704 YEATS4O95619 227 aa19.77■□□□□ 0.76
SPG7-201ENST00000268704 KIF23Q02241 960 aaPredicted RBP19.77■□□□□ 0.76
SPG7-201ENST00000268704 EVCP57679 992 aa19.77■□□□□ 0.75
SPG7-201ENST00000268704 FANCCQ00597 558 aa19.76■□□□□ 0.75
SPG7-201ENST00000268704 HSP90AA4PQ58FG1 418 aa19.76■□□□□ 0.75
SPG7-201ENST00000268704 TTC39AQ5SRH9 613 aa19.76■□□□□ 0.75
SPG7-201ENST00000268704 CCDC150Q8NCX0 1101 aa19.76■□□□□ 0.75
SPG7-201ENST00000268704 GPR108Q9NPR9 543 aa19.76■□□□□ 0.75
SPG7-201ENST00000268704 KCND1Q9NSA2 647 aa19.76■□□□□ 0.75
SPG7-201ENST00000268704 ZNF330Q9Y3S2 320 aaPredicted RBP19.76■□□□□ 0.75
SPG7-201ENST00000268704 ZAP70P43403 619 aa19.76■□□□□ 0.75
SPG7-201ENST00000268704 GABPB1Q06547 395 aaPredicted RBP19.76■□□□□ 0.75
SPG7-201ENST00000268704 HOMER1Q86YM7 354 aa19.75■□□□□ 0.75
SPG7-201ENST00000268704 XAGE2Q96GT9 111 aa19.75■□□□□ 0.75
SPG7-201ENST00000268704 BPIFA3Q9BQP9 254 aa19.75■□□□□ 0.75
SPG7-201ENST00000268704 PNOCQ13519 176 aa19.75■□□□□ 0.75
SPG7-201ENST00000268704 UBE2Q2LH0YL09 131 aa19.74■□□□□ 0.75
SPG7-201ENST00000268704 FANCGO15287 622 aa19.74■□□□□ 0.75
SPG7-201ENST00000268704 RALYLQ86SE5 291 aaKnown RBP19.74■□□□□ 0.75
SPG7-201ENST00000268704 CLIC6Q96NY7 704 aa19.74■□□□□ 0.75
SPG7-201ENST00000268704 L2HGDHQ9H9P8 463 aa19.74■□□□□ 0.75
SPG7-201ENST00000268704 SENP2Q9HC62 589 aa19.74■□□□□ 0.75
SPG7-201ENST00000268704 CEP126Q9P2H0 1117 aa19.74■□□□□ 0.75
SPG7-201ENST00000268704 TERF2Q15554 542 aa19.74■□□□□ 0.75
SPG7-201ENST00000268704 PHKBQ93100 1093 aa19.74■□□□□ 0.75
SPG7-201ENST00000268704 BRAPQ7Z569 592 aa19.74■□□□□ 0.75
SPG7-201ENST00000268704 DNAI1Q9UI46 699 aa19.74■□□□□ 0.75
SPG7-201ENST00000268704 TMEM232C9JQI7 657 aa19.73■□□□□ 0.75
SPG7-201ENST00000268704 TRERF1Q96PN7 1200 aa19.73■□□□□ 0.75
SPG7-201ENST00000268704 CMA1P23946 247 aa19.73■□□□□ 0.75
SPG7-201ENST00000268704 NCOA7Q8NI08 942 aa19.73■□□□□ 0.75
SPG7-201ENST00000268704 NBPF3Q9H094 633 aa19.73■□□□□ 0.75
SPG7-201ENST00000268704 GPAA1O43292 621 aa19.72■□□□□ 0.75
SPG7-201ENST00000268704 DHX16O60231 1041 aaKnown RBP19.72■□□□□ 0.75
SPG7-201ENST00000268704 SYKP43405 635 aa19.72■□□□□ 0.75
SPG7-201ENST00000268704 CCDC93Q567U6 631 aa19.72■□□□□ 0.75
SPG7-201ENST00000268704 CCDC158Q5M9N0 1113 aa19.72■□□□□ 0.75
SPG7-201ENST00000268704 SHC4Q6S5L8 630 aa19.72■□□□□ 0.75
SPG7-201ENST00000268704 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.72■□□□□ 0.756e-8■■□□□ 13.6
SPG7-201ENST00000268704 PSDA5PKW4 1024 aaPredicted RBP19.72■□□□□ 0.75
SPG7-201ENST00000268704 KIF2AO00139 706 aaPredicted RBP19.72■□□□□ 0.75
SPG7-201ENST00000268704 TPM4P67936 248 aa19.72■□□□□ 0.75
SPG7-201ENST00000268704 VPS37DQ86XT2 251 aa19.72■□□□□ 0.75
SPG7-201ENST00000268704 FBXL16Q8N461 479 aa19.72■□□□□ 0.75
SPG7-201ENST00000268704 LAMB4A4D0S4 1761 aa19.72■□□□□ 0.75
SPG7-201ENST00000268704 ZNF213O14771 459 aa19.72■□□□□ 0.75
SPG7-201ENST00000268704 FAM177A1Q8N128 213 aaPredicted RBP19.72■□□□□ 0.75
SPG7-201ENST00000268704 ALG1Q9BT22 464 aa19.72■□□□□ 0.75
SPG7-201ENST00000268704 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.72■□□□□ 0.754e-7■■■■□ 21.1
SPG7-201ENST00000268704 NUP188Q5SRE5 1749 aa19.72■□□□□ 0.75
SPG7-201ENST00000268704 C4AP0C0L4 1744 aa19.71■□□□□ 0.75
SPG7-201ENST00000268704 C4BP0C0L5 1744 aa19.71■□□□□ 0.75
SPG7-201ENST00000268704 SERPINC1P01008 464 aa19.71■□□□□ 0.75
SPG7-201ENST00000268704 CLCN6P51797 869 aa19.71■□□□□ 0.75
SPG7-201ENST00000268704 UBASH3AP57075 661 aa19.71■□□□□ 0.75
SPG7-201ENST00000268704 CFAP100Q494V2 611 aa19.71■□□□□ 0.75
SPG7-201ENST00000268704 ARHGAP29Q52LW3 1261 aa19.71■□□□□ 0.75
SPG7-201ENST00000268704 MYL10Q9BUA6 226 aa19.71■□□□□ 0.75
SPG7-201ENST00000268704 TMEM51Q9NW97 253 aa19.71■□□□□ 0.75
SPG7-201ENST00000268704 FAM53CQ9NYF3 392 aa19.71■□□□□ 0.75
SPG7-201ENST00000268704 STRCQ7RTU9 1775 aa19.71■□□□□ 0.75
SPG7-201ENST00000268704 SLC39A14Q15043 492 aa19.71■□□□□ 0.75
SPG7-201ENST00000268704 CCDC57Q2TAC2 916 aa19.71■□□□□ 0.75
SPG7-201ENST00000268704 SPECC1Q5M775 1068 aa19.71■□□□□ 0.75
SPG7-201ENST00000268704 CYB5R4Q7L1T6 521 aa19.71■□□□□ 0.75
SPG7-201ENST00000268704 PROSER2Q86WR7 435 aaPredicted RBP19.71■□□□□ 0.75
SPG7-201ENST00000268704 TMX1Q9H3N1 280 aa19.71■□□□□ 0.75
SPG7-201ENST00000268704 C1orf167Q5SNV9 1468 aa19.71■□□□□ 0.75
SPG7-201ENST00000268704 ERICH4A6NGS2 130 aa19.7■□□□□ 0.74
SPG7-201ENST00000268704 H2AFXP16104 143 aaPredicted RBP19.7■□□□□ 0.74
SPG7-201ENST00000268704 MICU3Q86XE3 530 aa19.7■□□□□ 0.74
SPG7-201ENST00000268704 TBC1D10CQ8IV04 446 aa19.7■□□□□ 0.74
SPG7-201ENST00000268704 UTP14AQ9BVJ6 771 aaKnown RBP19.7■□□□□ 0.74
SPG7-201ENST00000268704 FOXN1O15353 648 aa19.7■□□□□ 0.74
SPG7-201ENST00000268704 CDC27P30260 824 aa19.7■□□□□ 0.74
SPG7-201ENST00000268704 APPBP2Q92624 585 aa19.7■□□□□ 0.74
SPG7-201ENST00000268704 INCENPQ9NQS7 918 aa19.7■□□□□ 0.74
SPG7-201ENST00000268704 CIAO1O76071 339 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms