RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 CMTR1Q8N1G2 835 aaKnown RBP22.83■■□□□ 1.25
CSPG5-201ENST00000264723 ARMT1Q9H993 441 aa22.83■■□□□ 1.25
CSPG5-201ENST00000264723 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.83■■□□□ 1.25
CSPG5-201ENST00000264723 F8W031 263 aaPredicted RBP22.83■■□□□ 1.24
CSPG5-201ENST00000264723 CCDC102BQ68D86 513 aa22.83■■□□□ 1.24
CSPG5-201ENST00000264723 HELLSQ9NRZ9 838 aa22.83■■□□□ 1.24
CSPG5-201ENST00000264723 MPHOSPH10O00566 681 aaKnown RBP22.82■■□□□ 1.24
CSPG5-201ENST00000264723 SSBP05455 408 aaKnown RBP eCLIP22.82■■□□□ 1.24
CSPG5-201ENST00000264723 A0A0U1RQG5 324 aaPredicted RBP22.82■■□□□ 1.24
CSPG5-201ENST00000264723 PAXBP1Q9Y5B6 917 aa22.82■■□□□ 1.24
CSPG5-201ENST00000264723 PDE8AO60658 829 aa22.82■■□□□ 1.24
CSPG5-201ENST00000264723 PTPRUQ92729 1446 aa22.82■■□□□ 1.24
CSPG5-201ENST00000264723 ZHX3Q9H4I2 956 aa22.82■■□□□ 1.24
CSPG5-201ENST00000264723 hCG_1642624A0A1W2PR95 340 aa22.82■■□□□ 1.24
CSPG5-201ENST00000264723 CBFA2T2O43439 604 aa22.82■■□□□ 1.24
CSPG5-201ENST00000264723 CAVIN2O95810 425 aa22.82■■□□□ 1.24
CSPG5-201ENST00000264723 STX17P56962 302 aa22.82■■□□□ 1.24
CSPG5-201ENST00000264723 GSDMDP57764 484 aa22.81■■□□□ 1.24
CSPG5-201ENST00000264723 SMARCC1Q92922 1105 aaPredicted RBP22.81■■□□□ 1.24
CSPG5-201ENST00000264723 GREM2Q9H772 168 aa22.81■■□□□ 1.24
CSPG5-201ENST00000264723 WWC3Q9ULE0 1092 aa22.81■■□□□ 1.24
CSPG5-201ENST00000264723 CLIC4Q9Y696 253 aa22.81■■□□□ 1.24
CSPG5-201ENST00000264723 RIMBP3CA6NJZ7 1639 aa22.81■■□□□ 1.24
CSPG5-201ENST00000264723 RIMBP3BA6NNM3 1639 aa22.81■■□□□ 1.24
CSPG5-201ENST00000264723 RIMBP3Q9UFD9 1639 aa22.81■■□□□ 1.24
CSPG5-201ENST00000264723 WDR17Q8IZU2 1322 aa22.81■■□□□ 1.24
CSPG5-201ENST00000264723 FGAP02671 866 aa22.81■■□□□ 1.24
CSPG5-201ENST00000264723 NLRP5P59047 1200 aa22.81■■□□□ 1.24
CSPG5-201ENST00000264723 PCDHA7Q9UN72 937 aa22.81■■□□□ 1.24
CSPG5-201ENST00000264723 PDIA3P30101 505 aaKnown RBP22.81■■□□□ 1.24
CSPG5-201ENST00000264723 SYNE4Q8N205 404 aa22.81■■□□□ 1.24
CSPG5-201ENST00000264723 NSUN7Q8NE18 718 aaKnown RBP22.81■■□□□ 1.24
CSPG5-201ENST00000264723 APPBP2Q92624 585 aa22.81■■□□□ 1.24
CSPG5-201ENST00000264723 CDK5RAP3Q96JB5 506 aa22.81■■□□□ 1.24
CSPG5-201ENST00000264723 ZNF202O95125 648 aa22.8■■□□□ 1.24
CSPG5-201ENST00000264723 CEP170BQ9Y4F5 1589 aaPredicted RBP22.8■■□□□ 1.24
CSPG5-201ENST00000264723 GNG11P61952 73 aa22.8■■□□□ 1.24
CSPG5-201ENST00000264723 A0A0G2JLW4 131 aa22.8■■□□□ 1.24
CSPG5-201ENST00000264723 NEMFO60524 1076 aa22.8■■□□□ 1.24
CSPG5-201ENST00000264723 NDUFA8P51970 172 aa22.8■■□□□ 1.24
CSPG5-201ENST00000264723 AIFM3Q96NN9 605 aa22.8■■□□□ 1.24
CSPG5-201ENST00000264723 TMEM87AQ8NBN3 555 aa22.79■■□□□ 1.24
CSPG5-201ENST00000264723 CTDP1Q9Y5B0 961 aaPredicted RBP22.79■■□□□ 1.24
CSPG5-201ENST00000264723 MTX1Q13505 466 aa22.79■■□□□ 1.24
CSPG5-201ENST00000264723 CARD10Q9BWT7 1032 aa22.79■■□□□ 1.24
CSPG5-201ENST00000264723 ANKARQ7Z5J8 1434 aa22.79■■□□□ 1.24
CSPG5-201ENST00000264723 RTN1Q16799 776 aa22.79■■□□□ 1.24
CSPG5-201ENST00000264723 CGNQ9P2M7 1197 aaKnown RBP22.79■■□□□ 1.24
CSPG5-201ENST00000264723 FILIP1LQ4L180 1135 aa22.78■■□□□ 1.24
CSPG5-201ENST00000264723 XPO4Q9C0E2 1151 aaKnown RBP22.78■■□□□ 1.24
CSPG5-201ENST00000264723 CCDC87Q9NVE4 849 aa22.78■■□□□ 1.24
CSPG5-201ENST00000264723 PFKFB2O60825 505 aa22.78■■□□□ 1.24
CSPG5-201ENST00000264723 ANO1Q5XXA6 986 aa22.78■■□□□ 1.24
CSPG5-201ENST00000264723 OSBP2Q969R2 916 aa22.78■■□□□ 1.24
CSPG5-201ENST00000264723 TFCP2L1Q9NZI6 479 aa22.78■■□□□ 1.24
CSPG5-201ENST00000264723 TPTE2Q6XPS3 522 aa22.78■■□□□ 1.24
CSPG5-201ENST00000264723 RTCBQ9Y3I0 505 aaKnown RBP22.78■■□□□ 1.24
CSPG5-201ENST00000264723 CDC42BPGQ6DT37 1551 aa22.77■■□□□ 1.24
CSPG5-201ENST00000264723 TNNT3P45378 269 aaPredicted RBP22.77■■□□□ 1.24
CSPG5-201ENST00000264723 CTDSPL2Q05D32 466 aa22.77■■□□□ 1.24
CSPG5-201ENST00000264723 PIGBQ92521 554 aa22.77■■□□□ 1.24
CSPG5-201ENST00000264723 TMEM131LA2VDJ0 1609 aa22.77■■□□□ 1.24
CSPG5-201ENST00000264723 SNAP23O00161 211 aa22.77■■□□□ 1.24
CSPG5-201ENST00000264723 GOLGA8FQ08AF8 430 aa22.77■■□□□ 1.24
CSPG5-201ENST00000264723 GOLGA8DPQ0D2H9 430 aa22.77■■□□□ 1.24
CSPG5-201ENST00000264723 PUM3Q15397 648 aaKnown RBP22.77■■□□□ 1.24
CSPG5-201ENST00000264723 ELF2Q15723 593 aa22.77■■□□□ 1.24
CSPG5-201ENST00000264723 ESR2Q92731 530 aa22.77■■□□□ 1.24
CSPG5-201ENST00000264723 ZNF532Q9HCE3 1301 aa22.77■■□□□ 1.24
CSPG5-201ENST00000264723 MAGEB6P1A0A0J9YX57 407 aa22.77■■□□□ 1.23
CSPG5-201ENST00000264723 RESTQ13127 1097 aa22.77■■□□□ 1.23
CSPG5-201ENST00000264723 NOC3LQ8WTT2 800 aaKnown RBP22.77■■□□□ 1.23
CSPG5-201ENST00000264723 LLPHQ9BRT6 129 aaKnown RBP22.77■■□□□ 1.23
CSPG5-201ENST00000264723 KCNJ14Q9UNX9 436 aa22.77■■□□□ 1.23
CSPG5-201ENST00000264723 M0R2C6 588 aa22.76■■□□□ 1.23
CSPG5-201ENST00000264723 CLIC6Q96NY7 704 aa22.76■■□□□ 1.23
CSPG5-201ENST00000264723 SPATA31A3Q5VYP0 1347 aa22.76■■□□□ 1.23
CSPG5-201ENST00000264723 KAZALD1Q96I82 304 aa22.76■■□□□ 1.23
CSPG5-201ENST00000264723 MAST3O60307 1309 aa22.76■■□□□ 1.23
CSPG5-201ENST00000264723 IFIT1BQ5T764 474 aaKnown RBP22.76■■□□□ 1.23
CSPG5-201ENST00000264723 TCEAL9Q9UHQ7 104 aa22.76■■□□□ 1.23
CSPG5-201ENST00000264723 KARSQ15046 597 aaKnown RBP22.75■■□□□ 1.23
CSPG5-201ENST00000264723 TMCO3Q6UWJ1 677 aa22.75■■□□□ 1.23
CSPG5-201ENST00000264723 ZNF215Q9UL58 517 aaPredicted RBP22.75■■□□□ 1.23
CSPG5-201ENST00000264723 ADGRL3Q9HAR2 1447 aa22.75■■□□□ 1.23
CSPG5-201ENST00000264723 NEURL4Q96JN8 1562 aa22.75■■□□□ 1.23
CSPG5-201ENST00000264723 DPCR1Q3MIW9 517 aa22.75■■□□□ 1.23
CSPG5-201ENST00000264723 SMARCE1Q969G3 411 aa22.75■■□□□ 1.23
CSPG5-201ENST00000264723 DHX58Q96C10 678 aa22.75■■□□□ 1.23
CSPG5-201ENST00000264723 KRT23Q9C075 422 aa22.75■■□□□ 1.23
CSPG5-201ENST00000264723 NAP1L1P55209 391 aaKnown RBP22.74■■□□□ 1.23
CSPG5-201ENST00000264723 MYSM1Q5VVJ2 828 aa22.74■■□□□ 1.23
CSPG5-201ENST00000264723 ZBTB38Q8NAP3 1195 aaPredicted RBP22.74■■□□□ 1.23
CSPG5-201ENST00000264723 AP5Z1O43299 807 aa22.74■■□□□ 1.23
CSPG5-201ENST00000264723 CTSWP56202 376 aa22.74■■□□□ 1.23
CSPG5-201ENST00000264723 STOX1Q6ZVD7 989 aa22.74■■□□□ 1.23
CSPG5-201ENST00000264723 CRNKL1Q9BZJ0 848 aaKnown RBP22.74■■□□□ 1.23
CSPG5-201ENST00000264723 RNF216Q9NWF9 866 aaPredicted RBP22.74■■□□□ 1.23
CSPG5-201ENST00000264723 GOLGA6L1Q8N7Z2 621 aa22.74■■□□□ 1.23
CSPG5-201ENST00000264723 MCM9Q9NXL9 1143 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms