RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 ZSWIM6Q9HCJ5 1215 aa19.09■□□□□ 0.65
PHRF1-201ENST00000264555 MCM3P25205 808 aa19.09■□□□□ 0.65
PHRF1-201ENST00000264555 LMOD1P29536 600 aaPredicted RBP19.09■□□□□ 0.65
PHRF1-201ENST00000264555 ME3Q16798 604 aa19.09■□□□□ 0.65
PHRF1-201ENST00000264555 SKIDA1Q1XH10 827 aa19.09■□□□□ 0.65
PHRF1-201ENST00000264555 ELP1O95163 1332 aa19.09■□□□□ 0.65
PHRF1-201ENST00000264555 RILPL1Q5EBL4 403 aa19.09■□□□□ 0.65
PHRF1-201ENST00000264555 LEO1Q8WVC0 666 aaPredicted RBP19.09■□□□□ 0.65
PHRF1-201ENST00000264555 HAUS7Q99871 368 aa19.09■□□□□ 0.65
PHRF1-201ENST00000264555 CLSTN2Q9H4D0 955 aa19.09■□□□□ 0.65
PHRF1-201ENST00000264555 A0A1B0GVL5 298 aa19.09■□□□□ 0.65
PHRF1-201ENST00000264555 FAM173BQ6P4H8 233 aa19.09■□□□□ 0.65
PHRF1-201ENST00000264555 TTLL7Q6ZT98 887 aa19.09■□□□□ 0.65
PHRF1-201ENST00000264555 CCDC102AQ96A19 550 aa19.09■□□□□ 0.65
PHRF1-201ENST00000264555 KAT6BQ8WYB5 2073 aa19.08■□□□□ 0.65
PHRF1-201ENST00000264555 E7EWF7 191 aa19.08■□□□□ 0.65
PHRF1-201ENST00000264555 DEXIO95424 95 aa19.08■□□□□ 0.65
PHRF1-201ENST00000264555 TDRD12Q587J7 1177 aaKnown RBP19.08■□□□□ 0.65
PHRF1-201ENST00000264555 TRAPPC3LQ5T215 181 aa19.08■□□□□ 0.65
PHRF1-201ENST00000264555 SPATA5Q8NB90 893 aa19.08■□□□□ 0.65
PHRF1-201ENST00000264555 HIBADHP31937 336 aaKnown RBP19.08■□□□□ 0.64
PHRF1-201ENST00000264555 ANO1Q5XXA6 986 aa19.08■□□□□ 0.64
PHRF1-201ENST00000264555 MED14O60244 1454 aa19.08■□□□□ 0.64
PHRF1-201ENST00000264555 GNG11P61952 73 aa19.08■□□□□ 0.64
PHRF1-201ENST00000264555 ZC3H12CQ9C0D7 883 aaKnown RBP19.08■□□□□ 0.64
PHRF1-201ENST00000264555 TRAF1Q13077 416 aa19.08■□□□□ 0.64
PHRF1-201ENST00000264555 MAP9Q49MG5 647 aa19.08■□□□□ 0.64
PHRF1-201ENST00000264555 CDC37L1Q7L3B6 337 aa19.08■□□□□ 0.64
PHRF1-201ENST00000264555 F8W031 263 aaPredicted RBP19.07■□□□□ 0.64
PHRF1-201ENST00000264555 GADD45BO75293 160 aaPredicted RBP19.07■□□□□ 0.64
PHRF1-201ENST00000264555 TUBB4AP04350 444 aa19.07■□□□□ 0.64
PHRF1-201ENST00000264555 PICALMQ13492 652 aa19.07■□□□□ 0.64
PHRF1-201ENST00000264555 JAKMIP3Q5VZ66 844 aa19.07■□□□□ 0.64
PHRF1-201ENST00000264555 RRP36Q96EU6 259 aaKnown RBP19.07■□□□□ 0.64
PHRF1-201ENST00000264555 PSMA7O14818 248 aa19.07■□□□□ 0.64
PHRF1-201ENST00000264555 TAF5LO75529 589 aa19.07■□□□□ 0.64
PHRF1-201ENST00000264555 CTSWP56202 376 aa19.07■□□□□ 0.64
PHRF1-201ENST00000264555 GTF3C6Q969F1 213 aa19.07■□□□□ 0.64
PHRF1-201ENST00000264555 RGS12O14924 1447 aa19.06■□□□□ 0.64
PHRF1-201ENST00000264555 PNPLA6Q8IY17 1366 aa19.06■□□□□ 0.64
PHRF1-201ENST00000264555 ZNF532Q9HCE3 1301 aa19.06■□□□□ 0.64
PHRF1-201ENST00000264555 HSP90AA4PQ58FG1 418 aa19.06■□□□□ 0.64
PHRF1-201ENST00000264555 ZBTB38Q8NAP3 1195 aaPredicted RBP19.06■□□□□ 0.64
PHRF1-201ENST00000264555 ERMNQ8TAM6 284 aa19.06■□□□□ 0.64
PHRF1-201ENST00000264555 FBXO3Q9UK99 471 aa19.06■□□□□ 0.64
PHRF1-201ENST00000264555 LSG1Q9H089 658 aaKnown RBP19.06■□□□□ 0.64
PHRF1-201ENST00000264555 POTEB2H3BUK9 544 aa19.06■□□□□ 0.64
PHRF1-201ENST00000264555 CRACR2AQ9BSW2 395 aa19.06■□□□□ 0.64
PHRF1-201ENST00000264555 PRM3Q9NNZ6 103 aa19.06■□□□□ 0.64
PHRF1-201ENST00000264555 QRICH2Q9H0J4 1663 aa19.06■□□□□ 0.64
PHRF1-201ENST00000264555 PCCAP05165 728 aaPredicted RBP19.06■□□□□ 0.64
PHRF1-201ENST00000264555 PTGS1P23219 599 aa19.06■□□□□ 0.64
PHRF1-201ENST00000264555 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.06■□□□□ 0.64
PHRF1-201ENST00000264555 FEZ1Q99689 392 aa19.05■□□□□ 0.64
PHRF1-201ENST00000264555 TMX1Q9H3N1 280 aa19.05■□□□□ 0.64
PHRF1-201ENST00000264555 ERBB3P21860 1342 aa19.05■□□□□ 0.64
PHRF1-201ENST00000264555 GNA11P29992 359 aa19.05■□□□□ 0.64
PHRF1-201ENST00000264555 PAFAH1B1P43034 410 aa19.05■□□□□ 0.64
PHRF1-201ENST00000264555 MATR3P43243 847 aaKnown RBP eCLIP19.05■□□□□ 0.64
PHRF1-201ENST00000264555 JAK2O60674 1132 aa19.05■□□□□ 0.64
PHRF1-201ENST00000264555 FAM193AP78312 1265 aa19.05■□□□□ 0.64
PHRF1-201ENST00000264555 STXBP4Q6ZWJ1 553 aa19.05■□□□□ 0.64
PHRF1-201ENST00000264555 IQUBQ8NA54 791 aa19.05■□□□□ 0.64
PHRF1-201ENST00000264555 CCNL1Q9UK58 526 aaPredicted RBP19.05■□□□□ 0.64
PHRF1-201ENST00000264555 CNBD1Q8NA66 436 aa19.05■□□□□ 0.64
PHRF1-201ENST00000264555 ALS2CR12Q96Q35 445 aa19.05■□□□□ 0.64
PHRF1-201ENST00000264555 TRIM21P19474 475 aaKnown RBP19.04■□□□□ 0.64
PHRF1-201ENST00000264555 PPP2R5BQ15173 497 aa19.04■□□□□ 0.64
PHRF1-201ENST00000264555 UNC5CLQ8IV45 518 aa19.04■□□□□ 0.64
PHRF1-201ENST00000264555 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.04■□□□□ 0.64
PHRF1-201ENST00000264555 IFNKQ9P0W0 207 aa19.04■□□□□ 0.64
PHRF1-201ENST00000264555 EHBP1Q8NDI1 1231 aa19.04■□□□□ 0.64
PHRF1-201ENST00000264555 ZNF274Q96GC6 653 aaPredicted RBP19.04■□□□□ 0.64
PHRF1-201ENST00000264555 GTPBP4Q9BZE4 634 aaKnown RBP19.04■□□□□ 0.64
PHRF1-201ENST00000264555 MCM7P33993 719 aa19.04■□□□□ 0.64
PHRF1-201ENST00000264555 RBM17Q96I25 401 aaKnown RBP19.04■□□□□ 0.64
PHRF1-201ENST00000264555 TMEM63CQ9P1W3 806 aa19.03■□□□□ 0.64
PHRF1-201ENST00000264555 MAP4K1Q92918 833 aa19.03■□□□□ 0.64
PHRF1-201ENST00000264555 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.03■□□□□ 0.64
PHRF1-201ENST00000264555 H0YHG0 523 aa19.03■□□□□ 0.64
PHRF1-201ENST00000264555 ASIC1P78348 528 aa19.03■□□□□ 0.64
PHRF1-201ENST00000264555 MYL5Q02045 173 aa19.03■□□□□ 0.64
PHRF1-201ENST00000264555 CARD10Q9BWT7 1032 aa19.03■□□□□ 0.64
PHRF1-201ENST00000264555 GPR108Q9NPR9 543 aa19.03■□□□□ 0.64
PHRF1-201ENST00000264555 ENOX2Q16206 610 aaKnown RBP19.03■□□□□ 0.64
PHRF1-201ENST00000264555 DTHD1Q6ZMT9 781 aa19.03■□□□□ 0.64
PHRF1-201ENST00000264555 JAG2Q9Y219 1238 aa19.03■□□□□ 0.64
PHRF1-201ENST00000264555 POTEJP0CG39 1038 aa19.02■□□□□ 0.64
PHRF1-201ENST00000264555 CBX1P83916 185 aa19.02■□□□□ 0.64
PHRF1-201ENST00000264555 CETN1Q12798 172 aa19.02■□□□□ 0.64
PHRF1-201ENST00000264555 TPCN1Q9ULQ1 816 aa19.02■□□□□ 0.64
PHRF1-201ENST00000264555 TCERG1LQ5VWI1 586 aa19.02■□□□□ 0.64
PHRF1-201ENST00000264555 MYO1BO43795 1136 aa19.02■□□□□ 0.64
PHRF1-201ENST00000264555 OTUD7BQ6GQQ9 843 aa19.02■□□□□ 0.63
PHRF1-201ENST00000264555 PATL2C9JE40 543 aaKnown RBP19.02■□□□□ 0.63
PHRF1-201ENST00000264555 TTC6Q86TZ1 520 aa19.02■□□□□ 0.63
PHRF1-201ENST00000264555 CEP152O94986 1710 aa19.01■□□□□ 0.63
PHRF1-201ENST00000264555 HSPD1P10809 573 aaKnown RBP19.01■□□□□ 0.63
PHRF1-201ENST00000264555 LRRC24Q50LG9 513 aa19.01■□□□□ 0.63
PHRF1-201ENST00000264555 CENPHQ9H3R5 247 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms