RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 ADGRL1O94910 1474 aa18.49■□□□□ 0.55
USP13-201ENST00000263966 DCAF17Q5H9S7 520 aaPredicted RBP18.49■□□□□ 0.55
USP13-201ENST00000263966 CDC37L1Q7L3B6 337 aa18.49■□□□□ 0.55
USP13-201ENST00000263966 HARSP12081 509 aaKnown RBP18.49■□□□□ 0.55
USP13-201ENST00000263966 PANK2Q9BZ23 570 aa18.49■□□□□ 0.55
USP13-201ENST00000263966 CCDC169A6NNP5 214 aa18.49■□□□□ 0.55
USP13-201ENST00000263966 PPP1R2P41236 205 aa18.49■□□□□ 0.55
USP13-201ENST00000263966 FLIIQ13045 1269 aa18.49■□□□□ 0.55
USP13-201ENST00000263966 TEKT1Q969V4 418 aa18.49■□□□□ 0.55
USP13-201ENST00000263966 RIMBP2O15034 1052 aa18.49■□□□□ 0.55
USP13-201ENST00000263966 CCDC25Q86WR0 208 aa18.49■□□□□ 0.55
USP13-201ENST00000263966 SEC62Q99442 399 aaKnown RBP18.49■□□□□ 0.55
USP13-201ENST00000263966 IQGAP2Q13576 1575 aa18.48■□□□□ 0.55
USP13-201ENST00000263966 SPDYE16A6NNV3 312 aaPredicted RBP18.48■□□□□ 0.55
USP13-201ENST00000263966 SPDYE2Q495Y8 402 aa18.48■□□□□ 0.55
USP13-201ENST00000263966 CNBD1Q8NA66 436 aa18.48■□□□□ 0.55
USP13-201ENST00000263966 CALUO43852 315 aaPredicted RBP18.48■□□□□ 0.55
USP13-201ENST00000263966 GJB2P29033 226 aa18.48■□□□□ 0.55
USP13-201ENST00000263966 SDCCAG8Q86SQ7 713 aaPredicted RBP18.48■□□□□ 0.55
USP13-201ENST00000263966 VCX3BQ9H321 246 aa18.48■□□□□ 0.55
USP13-201ENST00000263966 YWHAEP62258 255 aaKnown RBP18.48■□□□□ 0.55
USP13-201ENST00000263966 ZBED4O75132 1171 aa18.48■□□□□ 0.55
USP13-201ENST00000263966 FYB2Q5VWT5 728 aa18.48■□□□□ 0.55
USP13-201ENST00000263966 CC2D2AQ9P2K1 1620 aa18.48■□□□□ 0.55
USP13-201ENST00000263966 TEX14Q8IWB6 1497 aa18.48■□□□□ 0.55
USP13-201ENST00000263966 UAP1Q16222 522 aaPredicted RBP18.48■□□□□ 0.55
USP13-201ENST00000263966 NIM1KQ8IY84 436 aa18.48■□□□□ 0.55
USP13-201ENST00000263966 PAXBP1Q9Y5B6 917 aa18.48■□□□□ 0.55
USP13-201ENST00000263966 C11orf95C9JLR9 678 aaPredicted RBP18.48■□□□□ 0.55
USP13-201ENST00000263966 PPFIA2O75334 1257 aa18.48■□□□□ 0.55
USP13-201ENST00000263966 UBL4BQ8N7F7 174 aa18.48■□□□□ 0.55
USP13-201ENST00000263966 IRAK4Q9NWZ3 460 aa18.48■□□□□ 0.55
USP13-201ENST00000263966 TRMT1Q9NXH9 659 aaKnown RBP18.48■□□□□ 0.55
USP13-201ENST00000263966 WAPLQ7Z5K2 1190 aa18.47■□□□□ 0.55
USP13-201ENST00000263966 CCDC26Q8TAB7 109 aa18.47■□□□□ 0.55
USP13-201ENST00000263966 RAD50Q92878 1312 aa18.47■□□□□ 0.55
USP13-201ENST00000263966 CFTRP13569 1480 aa18.47■□□□□ 0.55
USP13-201ENST00000263966 SNRKQ9NRH2 765 aa18.47■□□□□ 0.55
USP13-201ENST00000263966 ATRIPQ8WXE1 791 aa18.47■□□□□ 0.55
USP13-201ENST00000263966 PTPDC1A2A3K4 754 aa18.47■□□□□ 0.55
USP13-201ENST00000263966 VWA3BQ502W6 1294 aa18.47■□□□□ 0.55
USP13-201ENST00000263966 SELENOSQ9BQE4 189 aa18.47■□□□□ 0.55
USP13-201ENST00000263966 DZIP3Q86Y13 1208 aaKnown RBP18.47■□□□□ 0.55
USP13-201ENST00000263966 CETN3O15182 167 aa18.47■□□□□ 0.55
USP13-201ENST00000263966 PRPF6O94906 941 aaKnown RBP18.47■□□□□ 0.55
USP13-201ENST00000263966 IVLP07476 585 aa18.47■□□□□ 0.55
USP13-201ENST00000263966 UBE2HP62256 183 aa18.47■□□□□ 0.55
USP13-201ENST00000263966 HVCN1Q96D96 273 aa18.47■□□□□ 0.55
USP13-201ENST00000263966 GNG11P61952 73 aa18.47■□□□□ 0.55
USP13-201ENST00000263966 HAUS8Q9BT25 410 aa18.47■□□□□ 0.55
USP13-201ENST00000263966 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.47■□□□□ 0.55
USP13-201ENST00000263966 WASLO00401 505 aaPredicted RBP18.46■□□□□ 0.55
USP13-201ENST00000263966 CCDC42Q96M95 316 aa18.46■□□□□ 0.55
USP13-201ENST00000263966 SNAPC4Q5SXM2 1469 aa18.46■□□□□ 0.55
USP13-201ENST00000263966 TRIM75PA6NK02 468 aa18.46■□□□□ 0.55
USP13-201ENST00000263966 KLF18A0A0U1RQI7 1052 aa18.46■□□□□ 0.55
USP13-201ENST00000263966 NKIRAS1Q9NYS0 192 aa18.46■□□□□ 0.55
USP13-201ENST00000263966 TTLL3Q9Y4R7 772 aa18.46■□□□□ 0.55
USP13-201ENST00000263966 TERF1P54274 439 aa18.46■□□□□ 0.55
USP13-201ENST00000263966 TNFAIP1Q13829 316 aa18.46■□□□□ 0.55
USP13-201ENST00000263966 LGSNQ5TDP6 509 aa18.46■□□□□ 0.55
USP13-201ENST00000263966 ZKSCAN3Q9BRR0 538 aa18.46■□□□□ 0.54
USP13-201ENST00000263966 CASQ2O14958 399 aaPredicted RBP18.45■□□□□ 0.54
USP13-201ENST00000263966 ISM2Q6H9L7 571 aa18.45■□□□□ 0.54
USP13-201ENST00000263966 CCDC87Q9NVE4 849 aa18.45■□□□□ 0.54
USP13-201ENST00000263966 LEO1Q8WVC0 666 aaPredicted RBP18.45■□□□□ 0.54
USP13-201ENST00000263966 MGEA5O60502 916 aa18.45■□□□□ 0.54
USP13-201ENST00000263966 C16orf45Q96MC5 204 aaPredicted RBP18.45■□□□□ 0.54
USP13-201ENST00000263966 CEP120Q8N960 986 aa18.45■□□□□ 0.54
USP13-201ENST00000263966 ARFGAP3Q9NP61 516 aa18.45■□□□□ 0.54
USP13-201ENST00000263966 KCNK9Q9NPC2 374 aa18.45■□□□□ 0.54
USP13-201ENST00000263966 SAMD15Q9P1V8 674 aa18.45■□□□□ 0.54
USP13-201ENST00000263966 WWC3Q9ULE0 1092 aa18.45■□□□□ 0.54
USP13-201ENST00000263966 MCMDC2Q4G0Z9 681 aa18.45■□□□□ 0.54
USP13-201ENST00000263966 WDR66Q8TBY9 1149 aa18.45■□□□□ 0.54
USP13-201ENST00000263966 TROQ12816 1431 aaPredicted RBP18.45■□□□□ 0.54
USP13-201ENST00000263966 MARCKSP29966 332 aaPredicted RBP18.45■□□□□ 0.54
USP13-201ENST00000263966 FAM47CQ5HY64 1035 aa18.45■□□□□ 0.54
USP13-201ENST00000263966 IPO11Q9UI26 975 aaKnown RBP18.45■□□□□ 0.54
USP13-201ENST00000263966 PPP2R5CQ13362 524 aa18.44■□□□□ 0.54
USP13-201ENST00000263966 CDCA7LQ96GN5 454 aa18.44■□□□□ 0.54
USP13-201ENST00000263966 SMARCA5O60264 1052 aaPredicted RBP18.44■□□□□ 0.54
USP13-201ENST00000263966 LARGE2Q8N3Y3 721 aa18.44■□□□□ 0.54
USP13-201ENST00000263966 MAGEB6Q8N7X4 407 aa18.44■□□□□ 0.54
USP13-201ENST00000263966 NSD2O96028 1365 aa18.44■□□□□ 0.54
USP13-201ENST00000263966 IL2RBP14784 551 aa18.44■□□□□ 0.54
USP13-201ENST00000263966 AS3MTQ9HBK9 375 aa18.44■□□□□ 0.54
USP13-201ENST00000263966 IL15P40933 162 aaPredicted RBP18.44■□□□□ 0.54
USP13-201ENST00000263966 PTGS1P23219 599 aa18.44■□□□□ 0.54
USP13-201ENST00000263966 STMN1P16949 149 aa18.43■□□□□ 0.54
USP13-201ENST00000263966 UBXN1Q04323 297 aa18.43■□□□□ 0.54
USP13-201ENST00000263966 CASC4Q6P4E1 433 aa18.43■□□□□ 0.54
USP13-201ENST00000263966 PDE6AP16499 860 aa18.43■□□□□ 0.54
USP13-201ENST00000263966 PTPN23Q9H3S7 1636 aa18.43■□□□□ 0.54
USP13-201ENST00000263966 ZNF165P49910 485 aa18.43■□□□□ 0.54
USP13-201ENST00000263966 TNNC1P63316 161 aa18.43■□□□□ 0.54
USP13-201ENST00000263966 RPS6KA2Q15349 733 aa18.43■□□□□ 0.54
USP13-201ENST00000263966 CTAGE15A4D2H0 777 aa18.43■□□□□ 0.54
USP13-201ENST00000263966 CTAGE8P0CG41 777 aa18.43■□□□□ 0.54
USP13-201ENST00000263966 GTF2F1P35269 517 aaKnown RBP eCLIP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms