RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 RAPGEF1Q13905 1077 aa17.92■□□□□ 0.46
SHANK3-201ENST00000262795 ARHGEF16Q5VV41 709 aa17.92■□□□□ 0.46
SHANK3-201ENST00000262795 ZBTB7AO95365 584 aa17.92■□□□□ 0.46
SHANK3-201ENST00000262795 RAD51AP2Q09MP3 1159 aa17.92■□□□□ 0.46
SHANK3-201ENST00000262795 MCMDC2Q4G0Z9 681 aa17.92■□□□□ 0.46
SHANK3-201ENST00000262795 MEIS3Q99687 375 aa17.92■□□□□ 0.46
SHANK3-201ENST00000262795 RNMTO43148 476 aaKnown RBP17.92■□□□□ 0.46
SHANK3-201ENST00000262795 MAATS1Q7Z4T9 603 aa17.92■□□□□ 0.46
SHANK3-201ENST00000262795 PFDN4Q9NQP4 134 aa17.92■□□□□ 0.46
SHANK3-201ENST00000262795 AGTPBP1Q9UPW5 1226 aa17.92■□□□□ 0.46
SHANK3-201ENST00000262795 GRIN2AQ12879 1464 aa17.92■□□□□ 0.46
SHANK3-201ENST00000262795 CRCPO75575 148 aa17.92■□□□□ 0.46
SHANK3-201ENST00000262795 ARHGEF6Q15052 776 aa17.92■□□□□ 0.46
SHANK3-201ENST00000262795 KIF9Q9HAQ2 790 aa17.92■□□□□ 0.46
SHANK3-201ENST00000262795 LIMCH1Q9UPQ0 1083 aa17.92■□□□□ 0.46
SHANK3-201ENST00000262795 KSR2Q6VAB6 950 aa17.91■□□□□ 0.46
SHANK3-201ENST00000262795 ZNF608Q9ULD9 1512 aaPredicted RBP17.91■□□□□ 0.46
SHANK3-201ENST00000262795 PRDM1O75626 825 aa17.91■□□□□ 0.46
SHANK3-201ENST00000262795 GAS8O95995 478 aa17.91■□□□□ 0.46
SHANK3-201ENST00000262795 RNF187Q5TA31 235 aaPredicted RBP17.91■□□□□ 0.46
SHANK3-201ENST00000262795 CCDC114Q96M63 670 aa17.91■□□□□ 0.46
SHANK3-201ENST00000262795 SFPQP23246 707 aaKnown RBP eCLIP17.91■□□□□ 0.46
SHANK3-201ENST00000262795 DNM2P50570 870 aa17.91■□□□□ 0.46
SHANK3-201ENST00000262795 RBM27Q9P2N5 1060 aaKnown RBP17.91■□□□□ 0.46
SHANK3-201ENST00000262795 WDR97A6NE52 1622 aa17.91■□□□□ 0.46
SHANK3-201ENST00000262795 RIOK3O14730 519 aaKnown RBP17.91■□□□□ 0.46
SHANK3-201ENST00000262795 ERCC3P19447 782 aa17.91■□□□□ 0.46
SHANK3-201ENST00000262795 KIAA0753Q2KHM9 967 aa17.91■□□□□ 0.46
SHANK3-201ENST00000262795 KRT24Q2M2I5 525 aa17.91■□□□□ 0.46
SHANK3-201ENST00000262795 RHPN1Q8TCX5 695 aa17.91■□□□□ 0.46
SHANK3-201ENST00000262795 LRFN2Q9ULH4 789 aa17.91■□□□□ 0.46
SHANK3-201ENST00000262795 NR1I2O75469 434 aa17.91■□□□□ 0.46
SHANK3-201ENST00000262795 ARPP19P56211 112 aa17.91■□□□□ 0.46
SHANK3-201ENST00000262795 PPM1EQ8WY54 764 aa17.91■□□□□ 0.46
SHANK3-201ENST00000262795 ZSWIM4Q9H7M6 989 aa17.91■□□□□ 0.46
SHANK3-201ENST00000262795 ALDH1L2Q3SY69 923 aa17.9■□□□□ 0.46
SHANK3-201ENST00000262795 NPATQ14207 1427 aa17.9■□□□□ 0.46
SHANK3-201ENST00000262795 RARSP54136 660 aaKnown RBP17.9■□□□□ 0.46
SHANK3-201ENST00000262795 ZMYM3Q14202 1370 aa17.9■□□□□ 0.46
SHANK3-201ENST00000262795 PALM3A6NDB9 673 aaPredicted RBP17.9■□□□□ 0.46
SHANK3-201ENST00000262795 GPIHBP1Q8IV16 184 aa17.9■□□□□ 0.46
SHANK3-201ENST00000262795 FAM169AQ9Y6X4 670 aa17.9■□□□□ 0.46
SHANK3-201ENST00000262795 N4BP3O15049 544 aa17.9■□□□□ 0.46
SHANK3-201ENST00000262795 BBXQ8WY36 941 aaPredicted RBP17.9■□□□□ 0.46
SHANK3-201ENST00000262795 KDM5BQ9UGL1 1544 aa17.9■□□□□ 0.46
SHANK3-201ENST00000262795 WDR44Q5JSH3 913 aa17.9■□□□□ 0.46
SHANK3-201ENST00000262795 CCDC129Q6ZRS4 1044 aa17.9■□□□□ 0.46
SHANK3-201ENST00000262795 ZNF830Q96NB3 372 aaPredicted RBP17.9■□□□□ 0.46
SHANK3-201ENST00000262795 TBC1D7Q9P0N9 293 aa17.9■□□□□ 0.46
SHANK3-201ENST00000262795 FNDC3AQ9Y2H6 1198 aaKnown RBP17.9■□□□□ 0.46
SHANK3-201ENST00000262795 CCT6AP40227 531 aaKnown RBP17.89■□□□□ 0.45
SHANK3-201ENST00000262795 KRT27Q7Z3Y8 459 aa17.89■□□□□ 0.45
SHANK3-201ENST00000262795 SH2B1Q9NRF2 756 aaPredicted RBP17.89■□□□□ 0.45
SHANK3-201ENST00000262795 EFCAB5A4FU69 1503 aa17.89■□□□□ 0.45
SHANK3-201ENST00000262795 CCDC172P0C7W6 258 aa17.89■□□□□ 0.45
SHANK3-201ENST00000262795 ALAS1P13196 640 aa17.89■□□□□ 0.45
SHANK3-201ENST00000262795 MICALL1Q8N3F8 863 aa17.89■□□□□ 0.45
SHANK3-201ENST00000262795 PPP1R16BQ96T49 567 aa17.89■□□□□ 0.45
SHANK3-201ENST00000262795 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.89■□□□□ 0.45
SHANK3-201ENST00000262795 TMCO3Q6UWJ1 677 aa17.89■□□□□ 0.45
SHANK3-201ENST00000262795 PPANQ9NQ55 473 aaKnown RBP17.89■□□□□ 0.45
SHANK3-201ENST00000262795 HOXC9P31274 260 aa17.89■□□□□ 0.45
SHANK3-201ENST00000262795 SLC1A4P43007 532 aa17.89■□□□□ 0.45
SHANK3-201ENST00000262795 NMIQ13287 307 aaPredicted RBP17.89■□□□□ 0.45
SHANK3-201ENST00000262795 C20orf194Q5TEA3 1177 aa17.89■□□□□ 0.45
SHANK3-201ENST00000262795 MRRFQ96E11 262 aaKnown RBP17.89■□□□□ 0.45
SHANK3-201ENST00000262795 IQCGQ9H095 443 aaKnown RBP17.89■□□□□ 0.45
SHANK3-201ENST00000262795 AS3MTQ9HBK9 375 aa17.89■□□□□ 0.45
SHANK3-201ENST00000262795 CLIP2Q9UDT6 1046 aa17.89■□□□□ 0.45
SHANK3-201ENST00000262795 SMIM23A6NLE4 172 aa17.89■□□□□ 0.45
SHANK3-201ENST00000262795 FMNL1O95466 1100 aaPredicted RBP17.89■□□□□ 0.45
SHANK3-201ENST00000262795 GSDMBQ8TAX9 411 aa17.89■□□□□ 0.45
SHANK3-201ENST00000262795 TRIM27P14373 513 aa17.88■□□□□ 0.45
SHANK3-201ENST00000262795 TSTA3Q13630 321 aaPredicted RBP17.88■□□□□ 0.45
SHANK3-201ENST00000262795 ABI1Q8IZP0 508 aa17.88■□□□□ 0.45
SHANK3-201ENST00000262795 ANKRD35Q8N283 1001 aa17.88■□□□□ 0.45
SHANK3-201ENST00000262795 TXNDC16Q9P2K2 825 aa17.88■□□□□ 0.45
SHANK3-201ENST00000262795 SREK1Q8WXA9 508 aaKnown RBP17.88■□□□□ 0.45
SHANK3-201ENST00000262795 FRMPD2Q68DX3 1309 aaPredicted RBP17.88■□□□□ 0.45
SHANK3-201ENST00000262795 PRPF6O94906 941 aaKnown RBP17.88■□□□□ 0.45
SHANK3-201ENST00000262795 MXRA7P84157 204 aa17.88■□□□□ 0.45
SHANK3-201ENST00000262795 ZNF174Q15697 407 aa17.88■□□□□ 0.45
SHANK3-201ENST00000262795 HS2ST1Q7LGA3 356 aa17.88■□□□□ 0.45
SHANK3-201ENST00000262795 APOBRQ0VD83 1088 aa17.88■□□□□ 0.45
SHANK3-201ENST00000262795 TTC12Q9H892 705 aaPredicted RBP17.88■□□□□ 0.45
SHANK3-201ENST00000262795 GOLGA6CA6NDK9 693 aa17.88■□□□□ 0.45
SHANK3-201ENST00000262795 GOLGA6BA6NDN3 693 aa17.88■□□□□ 0.45
SHANK3-201ENST00000262795 GOLGA6DP0CG33 693 aa17.88■□□□□ 0.45
SHANK3-201ENST00000262795 SYKP43405 635 aa17.88■□□□□ 0.45
SHANK3-201ENST00000262795 GOLGA6AQ9NYA3 693 aa17.88■□□□□ 0.45
SHANK3-201ENST00000262795 UAP1Q16222 522 aaPredicted RBP17.87■□□□□ 0.45
SHANK3-201ENST00000262795 RTL9Q8NET4 1388 aa17.87■□□□□ 0.45
SHANK3-201ENST00000262795 TIMM10P62072 90 aa17.87■□□□□ 0.45
SHANK3-201ENST00000262795 MSANTD4Q8NCY6 345 aa17.87■□□□□ 0.45
SHANK3-201ENST00000262795 C14orf93Q9H972 538 aaKnown RBP17.87■□□□□ 0.45
SHANK3-201ENST00000262795 POLIQ9UNA4 740 aa17.87■□□□□ 0.45
SHANK3-201ENST00000262795 SMTNP53814 917 aa17.87■□□□□ 0.45
SHANK3-201ENST00000262795 E7EVH7 732 aa17.87■□□□□ 0.45
SHANK3-201ENST00000262795 DNAJC10Q8IXB1 793 aa17.87■□□□□ 0.45
SHANK3-201ENST00000262795 TMTC2Q8N394 836 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms