RNA–Protein interactions for RNA: ENST00000262150.6

CDH19-201, Transcript of cadherin 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH19, Length 6,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-201ENST00000262150 CELF1Q92879 486 aaKnown RBP6.25□□□□□ -1.41
CDH19-201ENST00000262150 SLC26A6Q9BXS9 759 aa6.25□□□□□ -1.41
CDH19-201ENST00000262150 TANGO6Q9C0B7 1094 aa6.25□□□□□ -1.41
CDH19-201ENST00000262150 GOLGA6L19H0YKK7 550 aa6.24□□□□□ -1.41
CDH19-201ENST00000262150 CAMTA2O94983 1202 aa6.24□□□□□ -1.41
CDH19-201ENST00000262150 DCAF15Q66K64 600 aa6.24□□□□□ -1.41
CDH19-201ENST00000262150 MTFR1LQ9H019 292 aa6.24□□□□□ -1.41
CDH19-201ENST00000262150 USP17L3A6NCW0 530 aa6.24□□□□□ -1.41
CDH19-201ENST00000262150 USP17L4A6NCW7 530 aa6.24□□□□□ -1.41
CDH19-201ENST00000262150 ZBTB43O43298 467 aa6.24□□□□□ -1.41
CDH19-201ENST00000262150 PRC1O43663 620 aa6.24□□□□□ -1.41
CDH19-201ENST00000262150 ME1P48163 572 aa6.24□□□□□ -1.41
CDH19-201ENST00000262150 AOC3Q16853 763 aa6.24□□□□□ -1.41
CDH19-201ENST00000262150 USP17L1Q7RTZ2 530 aa6.24□□□□□ -1.41
CDH19-201ENST00000262150 EDC3Q96F86 508 aaKnown RBP6.24□□□□□ -1.41
CDH19-201ENST00000262150 SH2B1Q9NRF2 756 aaPredicted RBP6.24□□□□□ -1.41
CDH19-201ENST00000262150 KIF1AQ12756 1690 aa6.24□□□□□ -1.41
CDH19-201ENST00000262150 ATP5JP18859 108 aa6.24□□□□□ -1.41
CDH19-201ENST00000262150 TRAF1Q13077 416 aa6.24□□□□□ -1.41
CDH19-201ENST00000262150 CHST3Q7LGC8 479 aa6.24□□□□□ -1.41
CDH19-201ENST00000262150 TRMT1LQ7Z2T5 733 aaKnown RBP6.24□□□□□ -1.41
CDH19-201ENST00000262150 ANKRD20A12PQ8NF67 263 aa6.24□□□□□ -1.41
CDH19-201ENST00000262150 VTI1AQ96AJ9 217 aa6.24□□□□□ -1.41
CDH19-201ENST00000262150 ZKSCAN3Q9BRR0 538 aa6.24□□□□□ -1.41
CDH19-201ENST00000262150 LIMCH1Q9UPQ0 1083 aa6.24□□□□□ -1.41
CDH19-201ENST00000262150 DPEP1P16444 411 aa6.24□□□□□ -1.41
CDH19-201ENST00000262150 GNAQP50148 359 aa6.24□□□□□ -1.41
CDH19-201ENST00000262150 FERMT3Q86UX7 667 aa6.24□□□□□ -1.41
CDH19-201ENST00000262150 TRMT2AQ8IZ69 625 aaKnown RBP6.24□□□□□ -1.41
CDH19-201ENST00000262150 ISCA1Q9BUE6 129 aa6.24□□□□□ -1.41
CDH19-201ENST00000262150 ZNF521Q96K83 1311 aa6.24□□□□□ -1.41
CDH19-201ENST00000262150 WDR33Q9C0J8 1336 aaKnown RBP6.24□□□□□ -1.41
CDH19-201ENST00000262150 CHMLP26374 656 aa6.23□□□□□ -1.41
CDH19-201ENST00000262150 RTN1Q16799 776 aa6.23□□□□□ -1.41
CDH19-201ENST00000262150 HEATR3Q7Z4Q2 680 aa6.23□□□□□ -1.41
CDH19-201ENST00000262150 COA1Q9GZY4 146 aa6.23□□□□□ -1.41
CDH19-201ENST00000262150 RAD50Q92878 1312 aa6.23□□□□□ -1.41
CDH19-201ENST00000262150 USP32Q8NFA0 1604 aa6.23□□□□□ -1.41
CDH19-201ENST00000262150 GRIPAP1Q4V328 841 aa6.23□□□□□ -1.41
CDH19-201ENST00000262150 ABT1Q9ULW3 272 aaKnown RBP6.23□□□□□ -1.41
CDH19-201ENST00000262150 USP42Q9H9J4 1324 aaKnown RBP6.23□□□□□ -1.41
CDH19-201ENST00000262150 TNS2Q63HR2 1409 aa6.23□□□□□ -1.41
CDH19-201ENST00000262150 SEMA3EO15041 775 aa6.23□□□□□ -1.41
CDH19-201ENST00000262150 KINO60870 393 aaKnown RBP6.23□□□□□ -1.41
CDH19-201ENST00000262150 SMCR8Q8TEV9 937 aaPredicted RBP6.23□□□□□ -1.41
CDH19-201ENST00000262150 FAM227BQ96M60 508 aa6.23□□□□□ -1.41
CDH19-201ENST00000262150 ORC3Q9UBD5 711 aaPredicted RBP6.23□□□□□ -1.41
CDH19-201ENST00000262150 ECE2O60344 883 aa6.23□□□□□ -1.41
CDH19-201ENST00000262150 HMGN5P82970 282 aaKnown RBP6.23□□□□□ -1.41
CDH19-201ENST00000262150 SKOR2Q2VWA4 1001 aaPredicted RBP6.23□□□□□ -1.41
CDH19-201ENST00000262150 SASS6Q6UVJ0 657 aa6.23□□□□□ -1.41
CDH19-201ENST00000262150 SMARCC2Q8TAQ2 1214 aa6.23□□□□□ -1.41
CDH19-201ENST00000262150 GPCPD1Q9NPB8 672 aa6.23□□□□□ -1.41
CDH19-201ENST00000262150 IRX3P78415 501 aaPredicted RBP6.23□□□□□ -1.41
CDH19-201ENST00000262150 BMP2KQ9NSY1 1161 aaPredicted RBP6.23□□□□□ -1.41
CDH19-201ENST00000262150 FAM13BQ9NYF5 915 aa6.23□□□□□ -1.41
CDH19-201ENST00000262150 MINPP1Q9UNW1 487 aa6.23□□□□□ -1.41
CDH19-201ENST00000262150 CDHR2Q9BYE9 1310 aa6.23□□□□□ -1.41
CDH19-201ENST00000262150 PDE6AP16499 860 aa6.22□□□□□ -1.41
CDH19-201ENST00000262150 BRPF1P55201 1214 aaPredicted RBP6.22□□□□□ -1.41
CDH19-201ENST00000262150 PTPN12Q05209 780 aaKnown RBP6.22□□□□□ -1.41
CDH19-201ENST00000262150 TSR1Q2NL82 804 aaKnown RBP6.22□□□□□ -1.41
CDH19-201ENST00000262150 EPHA10Q5JZY3 1008 aa6.22□□□□□ -1.41
CDH19-201ENST00000262150 IVNS1ABPQ9Y6Y0 642 aa6.22□□□□□ -1.41
CDH19-201ENST00000262150 B4E1Z4 1266 aa6.22□□□□□ -1.41
CDH19-201ENST00000262150 USP17L8P0C7I0 530 aa6.22□□□□□ -1.41
CDH19-201ENST00000262150 KRT85P78386 507 aa6.22□□□□□ -1.41
CDH19-201ENST00000262150 CTDSPL2Q05D32 466 aa6.22□□□□□ -1.41
CDH19-201ENST00000262150 TBC1D10BQ4KMP7 808 aaPredicted RBP6.22□□□□□ -1.41
CDH19-201ENST00000262150 Q6ZUG5 572 aa6.22□□□□□ -1.41
CDH19-201ENST00000262150 SAMM50Q9Y512 469 aa6.22□□□□□ -1.41
CDH19-201ENST00000262150 RTL9Q8NET4 1388 aa6.22□□□□□ -1.41
CDH19-201ENST00000262150 PARP1P09874 1014 aaKnown RBP6.22□□□□□ -1.41
CDH19-201ENST00000262150 NAPAP54920 295 aa6.22□□□□□ -1.41
CDH19-201ENST00000262150 GPSM2P81274 684 aa6.22□□□□□ -1.41
CDH19-201ENST00000262150 CREB3L3Q68CJ9 461 aa6.22□□□□□ -1.41
CDH19-201ENST00000262150 SP8Q8IXZ3 490 aa6.22□□□□□ -1.41
CDH19-201ENST00000262150 RRP36Q96EU6 259 aaKnown RBP6.22□□□□□ -1.41
CDH19-201ENST00000262150 AS3MTQ9HBK9 375 aa6.22□□□□□ -1.41
CDH19-201ENST00000262150 CEP131Q9UPN4 1083 aa6.22□□□□□ -1.41
CDH19-201ENST00000262150 ATP10DQ9P241 1426 aa6.22□□□□□ -1.41
CDH19-201ENST00000262150 B4DLN1 442 aa6.22□□□□□ -1.41
CDH19-201ENST00000262150 CALM1P0DP23 149 aa6.22□□□□□ -1.41
CDH19-201ENST00000262150 CALM2P0DP24 149 aa6.22□□□□□ -1.41
CDH19-201ENST00000262150 CALM3P0DP25 149 aa6.22□□□□□ -1.41
CDH19-201ENST00000262150 MRPL12P52815 198 aaKnown RBP6.22□□□□□ -1.41
CDH19-201ENST00000262150 INTS5Q6P9B9 1019 aaKnown RBP6.22□□□□□ -1.41
CDH19-201ENST00000262150 OLFM4Q6UX06 510 aa6.22□□□□□ -1.41
CDH19-201ENST00000262150 AOX1Q06278 1338 aa6.22□□□□□ -1.41
CDH19-201ENST00000262150 USP17L12C9JPN9 530 aa6.22□□□□□ -1.41
CDH19-201ENST00000262150 USP17L21D6R901 530 aa6.22□□□□□ -1.41
CDH19-201ENST00000262150 BAG4O95429 457 aaKnown RBP6.22□□□□□ -1.41
CDH19-201ENST00000262150 SUPT20HL1Q3ZLR7 823 aa6.22□□□□□ -1.41
CDH19-201ENST00000262150 ZNF34Q8IZ26 560 aa6.22□□□□□ -1.41
CDH19-201ENST00000262150 GPR108Q9NPR9 543 aa6.22□□□□□ -1.41
CDH19-201ENST00000262150 DBNLQ9UJU6 430 aaKnown RBP6.22□□□□□ -1.41
CDH19-201ENST00000262150 SNAP23O00161 211 aa6.21□□□□□ -1.41
CDH19-201ENST00000262150 GYS1P13807 737 aa6.21□□□□□ -1.41
CDH19-201ENST00000262150 EPS15P42566 896 aa6.21□□□□□ -1.41
CDH19-201ENST00000262150 MATR3P43243 847 aaKnown RBP eCLIP6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms