RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 RBM27Q9P2N5 1060 aaKnown RBP10.24□□□□□ -0.77
CALCOCO2-201ENST00000258947 PARP3Q9Y6F1 533 aa10.24□□□□□ -0.77
CALCOCO2-201ENST00000258947 DHX16O60231 1041 aaKnown RBP10.23□□□□□ -0.77
CALCOCO2-201ENST00000258947 BRD1O95696 1058 aa10.23□□□□□ -0.77
CALCOCO2-201ENST00000258947 ADRA2BP18089 450 aa10.23□□□□□ -0.77
CALCOCO2-201ENST00000258947 DDIT3P35638 169 aa10.23□□□□□ -0.77
CALCOCO2-201ENST00000258947 TOB2Q14106 344 aaPredicted RBP10.23□□□□□ -0.77
CALCOCO2-201ENST00000258947 TMEM67Q5HYA8 995 aa10.23□□□□□ -0.77
CALCOCO2-201ENST00000258947 LCORLQ8N3X6 602 aa10.23□□□□□ -0.77
CALCOCO2-201ENST00000258947 SYAP1Q96A49 352 aaPredicted RBP10.23□□□□□ -0.77
CALCOCO2-201ENST00000258947 TFIP11Q9UBB9 837 aaKnown RBP10.23□□□□□ -0.77
CALCOCO2-201ENST00000258947 F8W031 263 aaPredicted RBP10.23□□□□□ -0.77
CALCOCO2-201ENST00000258947 F13A1P00488 732 aa10.23□□□□□ -0.77
CALCOCO2-201ENST00000258947 PLCB2Q00722 1185 aa10.23□□□□□ -0.77
CALCOCO2-201ENST00000258947 CSPP1Q1MSJ5 1256 aa10.23□□□□□ -0.77
CALCOCO2-201ENST00000258947 IFNL3Q8IZI9 196 aa10.23□□□□□ -0.77
CALCOCO2-201ENST00000258947 FAM84BQ96KN1 310 aaPredicted RBP10.23□□□□□ -0.77
CALCOCO2-201ENST00000258947 PRDM1O75626 825 aa10.23□□□□□ -0.77
CALCOCO2-201ENST00000258947 GYS1P13807 737 aa10.23□□□□□ -0.77
CALCOCO2-201ENST00000258947 USP5P45974 858 aa10.23□□□□□ -0.77
CALCOCO2-201ENST00000258947 DNM1Q05193 864 aaKnown RBP10.23□□□□□ -0.77
CALCOCO2-201ENST00000258947 ZNF804AQ7Z570 1209 aa10.23□□□□□ -0.77
CALCOCO2-201ENST00000258947 AMOTL1Q8IY63 956 aa10.23□□□□□ -0.77
CALCOCO2-201ENST00000258947 INCENPQ9NQS7 918 aa10.23□□□□□ -0.77
CALCOCO2-201ENST00000258947 PPP1R1BQ9UD71 204 aaPredicted RBP10.23□□□□□ -0.77
CALCOCO2-201ENST00000258947 ISY1Q9ULR0 285 aaKnown RBP10.23□□□□□ -0.77
CALCOCO2-201ENST00000258947 ZDHHC9Q9Y397 364 aa10.23□□□□□ -0.77
CALCOCO2-201ENST00000258947 PAPPAQ13219 1627 aa10.22□□□□□ -0.77
CALCOCO2-201ENST00000258947 GRAPQ13588 217 aa10.22□□□□□ -0.77
CALCOCO2-201ENST00000258947 GRAPLQ8TC17 118 aaPredicted RBP10.22□□□□□ -0.77
CALCOCO2-201ENST00000258947 NWD2Q9ULI1 1742 aa10.22□□□□□ -0.77
CALCOCO2-201ENST00000258947 NRAPQ86VF7 1730 aa10.22□□□□□ -0.77
CALCOCO2-201ENST00000258947 DYNLL1P63167 89 aaKnown RBP10.22□□□□□ -0.77
CALCOCO2-201ENST00000258947 KRT85P78386 507 aa10.22□□□□□ -0.77
CALCOCO2-201ENST00000258947 IL27Q8NEV9 243 aa10.22□□□□□ -0.77
CALCOCO2-201ENST00000258947 GGA1Q9UJY5 639 aa10.22□□□□□ -0.77
CALCOCO2-201ENST00000258947 MYH14Q7Z406 1995 aaKnown RBP10.22□□□□□ -0.77
CALCOCO2-201ENST00000258947 PTPDC1A2A3K4 754 aa10.22□□□□□ -0.77
CALCOCO2-201ENST00000258947 PATL2C9JE40 543 aaKnown RBP10.22□□□□□ -0.77
CALCOCO2-201ENST00000258947 MMP10P09238 476 aa10.22□□□□□ -0.77
CALCOCO2-201ENST00000258947 BICD2Q8TD16 824 aa10.22□□□□□ -0.77
CALCOCO2-201ENST00000258947 GTF3C6Q969F1 213 aa10.22□□□□□ -0.77
CALCOCO2-201ENST00000258947 STRBPQ96SI9 672 aaKnown RBP10.22□□□□□ -0.77
CALCOCO2-201ENST00000258947 MYL10Q9BUA6 226 aa10.22□□□□□ -0.77
CALCOCO2-201ENST00000258947 RTN4Q9NQC3 1192 aaKnown RBP10.22□□□□□ -0.77
CALCOCO2-201ENST00000258947 MBD3O95983 291 aa10.21□□□□□ -0.77
CALCOCO2-201ENST00000258947 LDHBP07195 334 aaKnown RBP10.21□□□□□ -0.77
CALCOCO2-201ENST00000258947 PRDX5P30044 214 aa10.21□□□□□ -0.77
CALCOCO2-201ENST00000258947 SF3A1Q15459 793 aaKnown RBP10.21□□□□□ -0.77
CALCOCO2-201ENST00000258947 CDC37L1Q7L3B6 337 aa10.21□□□□□ -0.77
CALCOCO2-201ENST00000258947 USP48Q86UV5 1035 aa10.21□□□□□ -0.77
CALCOCO2-201ENST00000258947 SLC12A7Q9Y666 1083 aa10.21□□□□□ -0.77
CALCOCO2-201ENST00000258947 NUP98P52948 1817 aa10.21□□□□□ -0.77
CALCOCO2-201ENST00000258947 GNAT2P19087 354 aa10.21□□□□□ -0.77
CALCOCO2-201ENST00000258947 HMGB2P26583 209 aaKnown RBP10.21□□□□□ -0.77
CALCOCO2-201ENST00000258947 SCRN1Q12765 414 aa10.21□□□□□ -0.77
CALCOCO2-201ENST00000258947 SLC10A5Q5PT55 438 aa10.21□□□□□ -0.77
CALCOCO2-201ENST00000258947 NLGN1Q8N2Q7 840 aa10.21□□□□□ -0.77
CALCOCO2-201ENST00000258947 RPAP1Q9BWH6 1393 aaPredicted RBP10.21□□□□□ -0.78
CALCOCO2-201ENST00000258947 METAP2P50579 478 aaKnown RBP eCLIP10.21□□□□□ -0.78
CALCOCO2-201ENST00000258947 AKAP17AQ02040 695 aaKnown RBP10.21□□□□□ -0.78
CALCOCO2-201ENST00000258947 TRIM29Q14134 588 aa10.21□□□□□ -0.78
CALCOCO2-201ENST00000258947 KLHL40Q2TBA0 621 aa10.21□□□□□ -0.78
CALCOCO2-201ENST00000258947 TXNRD3Q86VQ6 643 aa10.21□□□□□ -0.78
CALCOCO2-201ENST00000258947 RNF214Q8ND24 703 aa10.21□□□□□ -0.78
CALCOCO2-201ENST00000258947 CRNKL1Q9BZJ0 848 aaKnown RBP10.21□□□□□ -0.78
CALCOCO2-201ENST00000258947 SYCE3A1L190 88 aa10.2□□□□□ -0.78
CALCOCO2-201ENST00000258947 ONECUT3O60422 494 aaPredicted RBP10.2□□□□□ -0.78
CALCOCO2-201ENST00000258947 HMGN5P82970 282 aaKnown RBP10.2□□□□□ -0.78
CALCOCO2-201ENST00000258947 SPTY2D1Q68D10 685 aaPredicted RBP10.2□□□□□ -0.78
CALCOCO2-201ENST00000258947 ZNF512BQ96KM6 892 aaPredicted RBP10.2□□□□□ -0.78
CALCOCO2-201ENST00000258947 ZC3H12CQ9C0D7 883 aaKnown RBP10.2□□□□□ -0.78
CALCOCO2-201ENST00000258947 RNF41Q9H4P4 317 aaPredicted RBP10.2□□□□□ -0.78
CALCOCO2-201ENST00000258947 ORC3Q9UBD5 711 aaPredicted RBP10.2□□□□□ -0.78
CALCOCO2-201ENST00000258947 XDHP47989 1333 aa10.2□□□□□ -0.78
CALCOCO2-201ENST00000258947 NUP188Q5SRE5 1749 aa10.2□□□□□ -0.78
CALCOCO2-201ENST00000258947 GOLGA8AA7E2F4 631 aa10.2□□□□□ -0.78
CALCOCO2-201ENST00000258947 SLC51AQ86UW1 340 aa10.2□□□□□ -0.78
CALCOCO2-201ENST00000258947 TBC1D10CQ8IV04 446 aa10.2□□□□□ -0.78
CALCOCO2-201ENST00000258947 PIBF1Q8WXW3 757 aa10.2□□□□□ -0.78
CALCOCO2-201ENST00000258947 SPATA32Q96LK8 384 aa10.2□□□□□ -0.78
CALCOCO2-201ENST00000258947 LMBRD1Q9NUN5 540 aa10.2□□□□□ -0.78
CALCOCO2-201ENST00000258947 MCM9Q9NXL9 1143 aa10.2□□□□□ -0.78
CALCOCO2-201ENST00000258947 CYP2D7A0A087X1C5 515 aa10.2□□□□□ -0.78
CALCOCO2-201ENST00000258947 SLC3A2P08195 630 aaKnown RBP10.2□□□□□ -0.78
CALCOCO2-201ENST00000258947 EN1Q05925 392 aaPredicted RBP10.2□□□□□ -0.78
CALCOCO2-201ENST00000258947 TSGA10IPQ3SY00 556 aa10.2□□□□□ -0.78
CALCOCO2-201ENST00000258947 KCNB2Q92953 911 aa10.2□□□□□ -0.78
CALCOCO2-201ENST00000258947 C8orf76Q96K31 380 aa10.2□□□□□ -0.78
CALCOCO2-201ENST00000258947 BRPF3Q9ULD4 1205 aa10.2□□□□□ -0.78
CALCOCO2-201ENST00000258947 ATRNO75882 1429 aa10.19□□□□□ -0.78
CALCOCO2-201ENST00000258947 OTUD7BQ6GQQ9 843 aa10.19□□□□□ -0.78
CALCOCO2-201ENST00000258947 KRT23Q9C075 422 aa10.19□□□□□ -0.78
CALCOCO2-201ENST00000258947 ANGEL1Q9UNK9 670 aaKnown RBP10.19□□□□□ -0.78
CALCOCO2-201ENST00000258947 MTMR6Q9Y217 621 aa10.19□□□□□ -0.78
CALCOCO2-201ENST00000258947 EP400Q96L91 3159 aa10.19□□□□□ -0.78
CALCOCO2-201ENST00000258947 ZBTB43O43298 467 aa10.19□□□□□ -0.78
CALCOCO2-201ENST00000258947 POLR3DP05423 398 aaPredicted RBP10.19□□□□□ -0.78
CALCOCO2-201ENST00000258947 MECOMQ03112 1051 aa10.19□□□□□ -0.78
CALCOCO2-201ENST00000258947 WTAPQ15007 396 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms