RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 CCDC171Q6TFL3 1326 aa23.06■■□□□ 1.28
SBDS-201ENST00000246868 MAST2Q6P0Q8 1798 aa23.06■■□□□ 1.28
SBDS-201ENST00000246868 GSTO1P78417 241 aa23.05■■□□□ 1.28
SBDS-201ENST00000246868 MECOMQ03112 1051 aa23.05■■□□□ 1.28
SBDS-201ENST00000246868 NSUN4Q96CB9 384 aaKnown RBP23.05■■□□□ 1.28
SBDS-201ENST00000246868 SEC62Q99442 399 aaKnown RBP23.05■■□□□ 1.28
SBDS-201ENST00000246868 MAST3O60307 1309 aa23.05■■□□□ 1.28
SBDS-201ENST00000246868 EPB41L2O43491 1005 aaKnown RBP23.04■■□□□ 1.28
SBDS-201ENST00000246868 ARHGAP27Q6ZUM4 889 aa23.04■■□□□ 1.28
SBDS-201ENST00000246868 AIDAQ96BJ3 306 aa23.04■■□□□ 1.28
SBDS-201ENST00000246868 ZNRF3Q9ULT6 936 aa23.04■■□□□ 1.28
SBDS-201ENST00000246868 FKBP1AP62942 108 aaKnown RBP23.04■■□□□ 1.28
SBDS-201ENST00000246868 ZNF589Q86UQ0 364 aaPredicted RBP23.04■■□□□ 1.28
SBDS-201ENST00000246868 SLF2Q8IX21 1173 aa23.04■■□□□ 1.28
SBDS-201ENST00000246868 USP26Q9BXU7 913 aa23.04■■□□□ 1.28
SBDS-201ENST00000246868 C22orf23Q9BZE7 217 aa23.04■■□□□ 1.28
SBDS-201ENST00000246868 PUS7LQ9H0K6 701 aaKnown RBP23.04■■□□□ 1.28
SBDS-201ENST00000246868 SCN9AQ15858 1988 aa23.03■■□□□ 1.28
SBDS-201ENST00000246868 SRCAPQ6ZRS2 3230 aa23.03■■□□□ 1.28
SBDS-201ENST00000246868 M0R2C6 588 aa23.03■■□□□ 1.28
SBDS-201ENST00000246868 RASSF7Q02833 373 aa23.03■■□□□ 1.28
SBDS-201ENST00000246868 LDHCP07864 332 aa23.02■■□□□ 1.28
SBDS-201ENST00000246868 MCCP23508 829 aa23.02■■□□□ 1.28
SBDS-201ENST00000246868 CCDC129Q6ZRS4 1044 aa23.02■■□□□ 1.28
SBDS-201ENST00000246868 KCNQ5Q9NR82 932 aa23.02■■□□□ 1.28
SBDS-201ENST00000246868 YDJCA8MPS7 323 aa23.01■■□□□ 1.27
SBDS-201ENST00000246868 GPAA1O43292 621 aa23.01■■□□□ 1.27
SBDS-201ENST00000246868 DACT2Q5SW24 774 aa23.01■■□□□ 1.27
SBDS-201ENST00000246868 LSG1Q9H089 658 aaKnown RBP23.01■■□□□ 1.27
SBDS-201ENST00000246868 TBC1D32Q96NH3 1257 aa23■■□□□ 1.27
SBDS-201ENST00000246868 NOL10Q9BSC4 688 aaKnown RBP23■■□□□ 1.27
SBDS-201ENST00000246868 PSME4Q14997 1843 aa23■■□□□ 1.27
SBDS-201ENST00000246868 MAGEB6P1A0A0J9YX57 407 aa23■■□□□ 1.27
SBDS-201ENST00000246868 CERS5Q8N5B7 392 aa23■■□□□ 1.27
SBDS-201ENST00000246868 COL4A5P29400 1685 aa22.99■■□□□ 1.27
SBDS-201ENST00000246868 MYO3BQ8WXR4 1341 aa22.99■■□□□ 1.27
SBDS-201ENST00000246868 MBD4O95243 580 aa22.99■■□□□ 1.27
SBDS-201ENST00000246868 GRIK5Q16478 980 aa22.99■■□□□ 1.27
SBDS-201ENST00000246868 MIGA1Q8NAN2 632 aa22.99■■□□□ 1.27
SBDS-201ENST00000246868 ZNF384Q8TF68 577 aa22.99■■□□□ 1.27
SBDS-201ENST00000246868 TTF2Q9UNY4 1162 aaKnown RBP22.99■■□□□ 1.27
SBDS-201ENST00000246868 RAD17O75943 681 aa22.98■■□□□ 1.27
SBDS-201ENST00000246868 PTH1RQ03431 593 aa22.98■■□□□ 1.27
SBDS-201ENST00000246868 DSCC1Q9BVC3 393 aa22.98■■□□□ 1.27
SBDS-201ENST00000246868 MXD3Q9BW11 206 aa22.98■■□□□ 1.27
SBDS-201ENST00000246868 MYH2Q9UKX2 1941 aa22.98■■□□□ 1.27
SBDS-201ENST00000246868 MROH7-TTC4A0A0A0MT08 1334 aa22.97■■□□□ 1.27
SBDS-201ENST00000246868 F8W031 263 aaPredicted RBP22.97■■□□□ 1.27
SBDS-201ENST00000246868 BAG3O95817 575 aa22.97■■□□□ 1.27
SBDS-201ENST00000246868 YBX3P16989 372 aaKnown RBP eCLIP22.97■■□□□ 1.275e-6■□□□□ 9.6
SBDS-201ENST00000246868 GNAT2P19087 354 aa22.97■■□□□ 1.27
SBDS-201ENST00000246868 LMNB1P20700 586 aa22.97■■□□□ 1.27
SBDS-201ENST00000246868 DIXDC1Q155Q3 683 aa22.97■■□□□ 1.27
SBDS-201ENST00000246868 ADGRA1Q86SQ6 560 aa22.97■■□□□ 1.27
SBDS-201ENST00000246868 MAP4K1Q92918 833 aa22.97■■□□□ 1.27
SBDS-201ENST00000246868 STRBPQ96SI9 672 aaKnown RBP22.97■■□□□ 1.27
SBDS-201ENST00000246868 PSMD14O00487 310 aa22.97■■□□□ 1.27
SBDS-201ENST00000246868 HSPD1P10809 573 aaKnown RBP22.97■■□□□ 1.27
SBDS-201ENST00000246868 RBM25P49756 843 aaKnown RBP22.97■■□□□ 1.27
SBDS-201ENST00000246868 TNIP1Q15025 636 aa22.97■■□□□ 1.27
SBDS-201ENST00000246868 GPR162Q16538 588 aa22.97■■□□□ 1.27
SBDS-201ENST00000246868 RSBN1LQ6PCB5 846 aaPredicted RBP22.97■■□□□ 1.27
SBDS-201ENST00000246868 CERS3Q8IU89 383 aa22.97■■□□□ 1.27
SBDS-201ENST00000246868 ARMT1Q9H993 441 aa22.97■■□□□ 1.27
SBDS-201ENST00000246868 U3KPZ7 1027 aaPredicted RBP22.97■■□□□ 1.27
SBDS-201ENST00000246868 VIL1P09327 827 aaKnown RBP22.96■■□□□ 1.27
SBDS-201ENST00000246868 EIF6P56537 245 aaKnown RBP22.96■■□□□ 1.27
SBDS-201ENST00000246868 CIAPIN1Q6FI81 312 aa22.96■■□□□ 1.27
SBDS-201ENST00000246868 ZNF646O15015 1829 aaPredicted RBP22.95■■□□□ 1.26
SBDS-201ENST00000246868 KIAA0825Q8IV33 1275 aa22.95■■□□□ 1.26
SBDS-201ENST00000246868 LCORLQ8N3X6 602 aa22.95■■□□□ 1.26
SBDS-201ENST00000246868 FAM163AQ96GL9 167 aaPredicted RBP22.95■■□□□ 1.26
SBDS-201ENST00000246868 RIOK1Q9BRS2 568 aaKnown RBP22.95■■□□□ 1.26
SBDS-201ENST00000246868 AATFQ9NY61 560 aaKnown RBP eCLIP22.95■■□□□ 1.26
SBDS-201ENST00000246868 RBM8AQ9Y5S9 174 aaKnown RBP22.95■■□□□ 1.26
SBDS-201ENST00000246868 APPP05067 770 aa22.94■■□□□ 1.26
SBDS-201ENST00000246868 CXCL9Q07325 125 aa22.94■■□□□ 1.26
SBDS-201ENST00000246868 VPS53Q5VIR6 699 aa22.94■■□□□ 1.26
SBDS-201ENST00000246868 RNF20Q5VTR2 975 aa22.94■■□□□ 1.26
SBDS-201ENST00000246868 TEKT1Q969V4 418 aa22.94■■□□□ 1.26
SBDS-201ENST00000246868 MRIQ9BWK5 157 aa22.93■■□□□ 1.26
SBDS-201ENST00000246868 CRNKL1Q9BZJ0 848 aaKnown RBP22.93■■□□□ 1.26
SBDS-201ENST00000246868 NACAP1Q9BZK3 213 aa22.93■■□□□ 1.26
SBDS-201ENST00000246868 CTNNA3Q9UI47 895 aa22.93■■□□□ 1.26
SBDS-201ENST00000246868 RBM19Q9Y4C8 960 aaKnown RBP22.93■■□□□ 1.26
SBDS-201ENST00000246868 GAKO14976 1311 aa22.93■■□□□ 1.26
SBDS-201ENST00000246868 DICER1Q9UPY3 1922 aaKnown RBP22.93■■□□□ 1.26
SBDS-201ENST00000246868 PLCG2P16885 1265 aa22.93■■□□□ 1.26
SBDS-201ENST00000246868 HSPA4P34932 840 aa22.93■■□□□ 1.26
SBDS-201ENST00000246868 PRELPP51888 382 aa22.93■■□□□ 1.26
SBDS-201ENST00000246868 DYNLL1P63167 89 aaKnown RBP22.93■■□□□ 1.26
SBDS-201ENST00000246868 HDLBPQ00341 1268 aaKnown RBP22.93■■□□□ 1.26
SBDS-201ENST00000246868 HHIPL2Q6UWX4 724 aa22.93■■□□□ 1.26
SBDS-201ENST00000246868 AGBL3Q8NEM8 1001 aa22.93■■□□□ 1.26
SBDS-201ENST00000246868 SLC4A4Q9Y6R1 1079 aa22.93■■□□□ 1.26
SBDS-201ENST00000246868 RPAP1Q9BWH6 1393 aaPredicted RBP22.93■■□□□ 1.26
SBDS-201ENST00000246868 GPR75-ASB3A0A0A6YYF3 556 aa22.92■■□□□ 1.26
SBDS-201ENST00000246868 PATL2C9JE40 543 aaKnown RBP22.92■■□□□ 1.26
SBDS-201ENST00000246868 FZD9O00144 591 aa22.92■■□□□ 1.26
SBDS-201ENST00000246868 GRIN3BO60391 1043 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms