RNA–Protein interactions for RNA: ENST00000245414.8

IRF1-201, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-201ENST00000245414 MBIPQ9NS73 344 aa11.12□□□□□ -0.63
IRF1-201ENST00000245414 DDX20Q9UHI6 824 aaKnown RBP11.12□□□□□ -0.63
IRF1-201ENST00000245414 CDHR2Q9BYE9 1310 aa11.12□□□□□ -0.63
IRF1-201ENST00000245414 INO80Q9ULG1 1556 aaPredicted RBP11.12□□□□□ -0.63
IRF1-201ENST00000245414 MEFVO15553 781 aaPredicted RBP11.11□□□□□ -0.63
IRF1-201ENST00000245414 ATP1A3P13637 1013 aa11.11□□□□□ -0.63
IRF1-201ENST00000245414 GGCXP38435 758 aa11.11□□□□□ -0.63
IRF1-201ENST00000245414 USP5P45974 858 aa11.11□□□□□ -0.63
IRF1-201ENST00000245414 PPFIA1Q13136 1202 aa11.11□□□□□ -0.63
IRF1-201ENST00000245414 TRIM74Q86UV6 250 aa11.11□□□□□ -0.63
IRF1-201ENST00000245414 TRIM73Q86UV7 250 aa11.11□□□□□ -0.63
IRF1-201ENST00000245414 TBC1D31Q96DN5 1066 aa11.11□□□□□ -0.63
IRF1-201ENST00000245414 SIL1Q9H173 461 aa11.11□□□□□ -0.63
IRF1-201ENST00000245414 SUDS3Q9H7L9 328 aaPredicted RBP11.11□□□□□ -0.63
IRF1-201ENST00000245414 RPS6KL1Q9Y6S9 549 aa11.11□□□□□ -0.63
IRF1-201ENST00000245414 EIF2S2P20042 333 aaKnown RBP11.11□□□□□ -0.63
IRF1-201ENST00000245414 TOGARAM2Q6ZUX3 1019 aa11.11□□□□□ -0.63
IRF1-201ENST00000245414 RAB21Q9UL25 225 aa11.11□□□□□ -0.63
IRF1-201ENST00000245414 MSH6P52701 1360 aa11.11□□□□□ -0.63
IRF1-201ENST00000245414 MYOM1P52179 1685 aa11.11□□□□□ -0.63
IRF1-201ENST00000245414 PES1O00541 588 aaKnown RBP11.11□□□□□ -0.63
IRF1-201ENST00000245414 RANBP1P43487 201 aa11.11□□□□□ -0.63
IRF1-201ENST00000245414 PDCD2Q16342 344 aaPredicted RBP11.11□□□□□ -0.63
IRF1-201ENST00000245414 KLHL23Q8NBE8 558 aa11.11□□□□□ -0.63
IRF1-201ENST00000245414 ADGRL1O94910 1474 aa11.1□□□□□ -0.63
IRF1-201ENST00000245414 ANKRD33BA6NCL7 494 aa11.1□□□□□ -0.63
IRF1-201ENST00000245414 SYF2O95926 243 aaKnown RBP11.1□□□□□ -0.63
IRF1-201ENST00000245414 SF3B2Q13435 895 aaKnown RBP11.1□□□□□ -0.63
IRF1-201ENST00000245414 ADCK5Q3MIX3 580 aa11.1□□□□□ -0.63
IRF1-201ENST00000245414 CLTCL1P53675 1640 aa11.1□□□□□ -0.63
IRF1-201ENST00000245414 CTAGE9A4FU28 777 aa11.1□□□□□ -0.63
IRF1-201ENST00000245414 EIF3HO15372 352 aaKnown RBP eCLIP11.1□□□□□ -0.63
IRF1-201ENST00000245414 PECAM1P16284 738 aaPredicted RBP11.1□□□□□ -0.63
IRF1-201ENST00000245414 CEBPAP49715 358 aaPredicted RBP11.1□□□□□ -0.63
IRF1-201ENST00000245414 ADKP55263 362 aaKnown RBP11.1□□□□□ -0.63
IRF1-201ENST00000245414 IFT88Q13099 833 aa11.1□□□□□ -0.63
IRF1-201ENST00000245414 MTX1Q13505 466 aa11.1□□□□□ -0.63
IRF1-201ENST00000245414 CAPRIN2Q6IMN6 1127 aaKnown RBP11.1□□□□□ -0.63
IRF1-201ENST00000245414 FCHSD1Q86WN1 690 aa11.1□□□□□ -0.63
IRF1-201ENST00000245414 PTCH1Q13635 1447 aa11.1□□□□□ -0.63
IRF1-201ENST00000245414 ATP7AQ04656 1500 aa11.1□□□□□ -0.63
IRF1-201ENST00000245414 GOLGA6BA6NDN3 693 aa11.1□□□□□ -0.63
IRF1-201ENST00000245414 TFRCP02786 760 aaKnown RBP11.1□□□□□ -0.63
IRF1-201ENST00000245414 FAM160A1Q05DH4 1040 aa11.1□□□□□ -0.63
IRF1-201ENST00000245414 THEMIS2Q5TEJ8 643 aa11.1□□□□□ -0.63
IRF1-201ENST00000245414 PARP9Q8IXQ6 854 aa11.1□□□□□ -0.63
IRF1-201ENST00000245414 MSANTD4Q8NCY6 345 aa11.1□□□□□ -0.63
IRF1-201ENST00000245414 LMBR1Q8WVP7 490 aa11.1□□□□□ -0.63
IRF1-201ENST00000245414 FTOQ9C0B1 505 aaKnown RBP eCLIP11.1□□□□□ -0.63
IRF1-201ENST00000245414 SLC40A1Q9NP59 571 aa11.1□□□□□ -0.63
IRF1-201ENST00000245414 BIN2Q9UBW5 565 aaPredicted RBP11.1□□□□□ -0.63
IRF1-201ENST00000245414 PIK3R4Q99570 1358 aa11.09□□□□□ -0.63
IRF1-201ENST00000245414 RTN2O75298 545 aa11.09□□□□□ -0.63
IRF1-201ENST00000245414 FSBPO95073 299 aa11.09□□□□□ -0.63
IRF1-201ENST00000245414 TUBBP07437 444 aa11.09□□□□□ -0.63
IRF1-201ENST00000245414 CCDC175P0C221 793 aa11.09□□□□□ -0.63
IRF1-201ENST00000245414 C3orf20Q8ND61 904 aa11.09□□□□□ -0.63
IRF1-201ENST00000245414 BRF1Q92994 677 aa11.09□□□□□ -0.63
IRF1-201ENST00000245414 RIPOR2Q9Y4F9 1068 aa11.09□□□□□ -0.63
IRF1-201ENST00000245414 BUB1BO60566 1050 aaPredicted RBP11.09□□□□□ -0.63
IRF1-201ENST00000245414 ZMYND10O75800 440 aa11.09□□□□□ -0.63
IRF1-201ENST00000245414 SETSIPP0DME0 302 aa11.09□□□□□ -0.63
IRF1-201ENST00000245414 ICA1Q05084 483 aa11.09□□□□□ -0.63
IRF1-201ENST00000245414 CCDC121Q6ZUS5 278 aa11.09□□□□□ -0.63
IRF1-201ENST00000245414 CCDC50Q8IVM0 306 aa11.09□□□□□ -0.63
IRF1-201ENST00000245414 ATRIPQ8WXE1 791 aa11.09□□□□□ -0.63
IRF1-201ENST00000245414 GOLPH3LQ9H4A5 285 aa11.09□□□□□ -0.63
IRF1-201ENST00000245414 A0A1B0GVL5 298 aa11.08□□□□□ -0.63
IRF1-201ENST00000245414 ATP1A2P50993 1020 aa11.08□□□□□ -0.63
IRF1-201ENST00000245414 TUBB4BP68371 445 aa11.08□□□□□ -0.63
IRF1-201ENST00000245414 PIP4K2BP78356 416 aa11.08□□□□□ -0.63
IRF1-201ENST00000245414 PDCLQ13371 301 aa11.08□□□□□ -0.63
IRF1-201ENST00000245414 MYSM1Q5VVJ2 828 aa11.08□□□□□ -0.63
IRF1-201ENST00000245414 PPP4R3CPQ6ZMV5 832 aa11.08□□□□□ -0.63
IRF1-201ENST00000245414 SMARCC2Q8TAQ2 1214 aa11.08□□□□□ -0.63
IRF1-201ENST00000245414 NOC3LQ8WTT2 800 aaKnown RBP11.08□□□□□ -0.63
IRF1-201ENST00000245414 KIFC2Q96AC6 838 aa11.08□□□□□ -0.63
IRF1-201ENST00000245414 TMX4Q9H1E5 349 aaPredicted RBP11.08□□□□□ -0.63
IRF1-201ENST00000245414 GOPCQ9HD26 462 aa11.08□□□□□ -0.63
IRF1-201ENST00000245414 FANCLQ9NW38 375 aa11.08□□□□□ -0.63
IRF1-201ENST00000245414 MINK1Q8N4C8 1332 aaPredicted RBP11.08□□□□□ -0.64
IRF1-201ENST00000245414 DEPDC5O75140 1603 aa11.08□□□□□ -0.64
IRF1-201ENST00000245414 PYGLP06737 847 aa11.08□□□□□ -0.64
IRF1-201ENST00000245414 SLC3A2P08195 630 aaKnown RBP11.08□□□□□ -0.64
IRF1-201ENST00000245414 SLC8A1P32418 973 aa11.08□□□□□ -0.64
IRF1-201ENST00000245414 FNTAP49354 379 aa11.08□□□□□ -0.64
IRF1-201ENST00000245414 SMTNP53814 917 aa11.08□□□□□ -0.64
IRF1-201ENST00000245414 WLSQ5T9L3 541 aa11.08□□□□□ -0.64
IRF1-201ENST00000245414 MSL3Q8N5Y2 521 aaKnown RBP11.08□□□□□ -0.64
IRF1-201ENST00000245414 F6X3S4 739 aa11.08□□□□□ -0.64
IRF1-201ENST00000245414 CCDC13Q8IYE1 715 aa11.08□□□□□ -0.64
IRF1-201ENST00000245414 CNTROBQ8N137 903 aa11.08□□□□□ -0.64
IRF1-201ENST00000245414 HINFPQ9BQA5 517 aa11.08□□□□□ -0.64
IRF1-201ENST00000245414 CHCHD3Q9NX63 227 aaKnown RBP11.08□□□□□ -0.64
IRF1-201ENST00000245414 BAIAP2L1Q9UHR4 511 aa11.08□□□□□ -0.64
IRF1-201ENST00000245414 SHPRHQ149N8 1683 aa11.08□□□□□ -0.64
IRF1-201ENST00000245414 MADDQ8WXG6 1647 aa11.08□□□□□ -0.64
IRF1-201ENST00000245414 PRPF6O94906 941 aaKnown RBP11.07□□□□□ -0.64
IRF1-201ENST00000245414 HSP90AB2PQ58FF8 381 aa11.07□□□□□ -0.64
IRF1-201ENST00000245414 DPF2Q92785 391 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms