RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 LRRN4CLQ8ND94 238 aa13.94□□□□□ -0.18
SEC61A1-201ENST00000243253 ANO10Q9NW15 660 aa13.94□□□□□ -0.18
SEC61A1-201ENST00000243253 RXRAP19793 462 aa13.94□□□□□ -0.18
SEC61A1-201ENST00000243253 TPD52L1Q16890 204 aaPredicted RBP13.94□□□□□ -0.18
SEC61A1-201ENST00000243253 IFNL2Q8IZJ0 200 aa13.94□□□□□ -0.18
SEC61A1-201ENST00000243253 AOPEPQ8N6M6 819 aa13.94□□□□□ -0.18
SEC61A1-201ENST00000243253 RNF113AO15541 343 aaKnown RBP13.94□□□□□ -0.18
SEC61A1-201ENST00000243253 ATP2B1P20020 1258 aa13.94□□□□□ -0.18
SEC61A1-201ENST00000243253 FSIP1Q8NA03 581 aa13.94□□□□□ -0.18
SEC61A1-201ENST00000243253 CGNQ9P2M7 1197 aaKnown RBP13.94□□□□□ -0.18
SEC61A1-201ENST00000243253 HPSEQ9Y251 543 aa13.94□□□□□ -0.18
SEC61A1-201ENST00000243253 A0A1B0GVL5 298 aa13.93□□□□□ -0.18
SEC61A1-201ENST00000243253 NPHP1O15259 732 aa13.93□□□□□ -0.18
SEC61A1-201ENST00000243253 RIC1Q4ADV7 1423 aa13.93□□□□□ -0.18
SEC61A1-201ENST00000243253 TTLL7Q6ZT98 887 aa13.93□□□□□ -0.18
SEC61A1-201ENST00000243253 CCDC112Q8NEF3 446 aa13.93□□□□□ -0.18
SEC61A1-201ENST00000243253 MRPS27Q92552 414 aaKnown RBP13.93□□□□□ -0.18
SEC61A1-201ENST00000243253 WDHD1O75717 1129 aaPredicted RBP13.93□□□□□ -0.18
SEC61A1-201ENST00000243253 FBXO18Q8NFZ0 1043 aa13.93□□□□□ -0.18
SEC61A1-201ENST00000243253 GJB4Q9NTQ9 266 aa13.93□□□□□ -0.18
SEC61A1-201ENST00000243253 H2AFXP16104 143 aaPredicted RBP13.92□□□□□ -0.18
SEC61A1-201ENST00000243253 SYNE4Q8N205 404 aa13.92□□□□□ -0.18
SEC61A1-201ENST00000243253 YEATS4O95619 227 aa13.92□□□□□ -0.18
SEC61A1-201ENST00000243253 FBXO38Q6PIJ6 1188 aa13.92□□□□□ -0.18
SEC61A1-201ENST00000243253 PI16Q6UXB8 463 aa13.92□□□□□ -0.18
SEC61A1-201ENST00000243253 HELBQ8NG08 1087 aaPredicted RBP13.92□□□□□ -0.18
SEC61A1-201ENST00000243253 ZNF396Q96N95 335 aaPredicted RBP13.92□□□□□ -0.18
SEC61A1-201ENST00000243253 PUS3Q9BZE2 481 aaKnown RBP13.92□□□□□ -0.18
SEC61A1-201ENST00000243253 TUBE1Q9UJT0 475 aa13.92□□□□□ -0.18
SEC61A1-201ENST00000243253 CPDO75976 1380 aa13.92□□□□□ -0.18
SEC61A1-201ENST00000243253 IL15P40933 162 aaPredicted RBP13.92□□□□□ -0.18
SEC61A1-201ENST00000243253 WDR19Q8NEZ3 1342 aa13.92□□□□□ -0.18
SEC61A1-201ENST00000243253 EYA2O00167 538 aa13.91□□□□□ -0.18
SEC61A1-201ENST00000243253 SCARF1Q14162 830 aa13.91□□□□□ -0.18
SEC61A1-201ENST00000243253 PPP1R13BQ96KQ4 1090 aa13.91□□□□□ -0.18
SEC61A1-201ENST00000243253 MAP3K14Q99558 947 aa13.91□□□□□ -0.18
SEC61A1-201ENST00000243253 XPO4Q9C0E2 1151 aaKnown RBP13.91□□□□□ -0.18
SEC61A1-201ENST00000243253 IQSEC3Q9UPP2 1182 aaPredicted RBP13.91□□□□□ -0.18
SEC61A1-201ENST00000243253 A0A1B0GUL7 405 aa13.91□□□□□ -0.18
SEC61A1-201ENST00000243253 TRIM65Q6PJ69 517 aa13.91□□□□□ -0.18
SEC61A1-201ENST00000243253 TMEM139Q8IV31 216 aa13.91□□□□□ -0.18
SEC61A1-201ENST00000243253 GOLGA6L19H0YKK7 550 aa13.91□□□□□ -0.18
SEC61A1-201ENST00000243253 PTPAQ15257 358 aa13.91□□□□□ -0.18
SEC61A1-201ENST00000243253 MYSM1Q5VVJ2 828 aa13.91□□□□□ -0.18
SEC61A1-201ENST00000243253 SNAP23O00161 211 aa13.9□□□□□ -0.18
SEC61A1-201ENST00000243253 KIF23Q02241 960 aaPredicted RBP13.9□□□□□ -0.18
SEC61A1-201ENST00000243253 PTPN14Q15678 1187 aa13.9□□□□□ -0.18
SEC61A1-201ENST00000243253 SLC4A8Q2Y0W8 1093 aa13.9□□□□□ -0.18
SEC61A1-201ENST00000243253 FAM89AQ96GI7 184 aa13.9□□□□□ -0.18
SEC61A1-201ENST00000243253 ERO1AQ96HE7 468 aa13.9□□□□□ -0.18
SEC61A1-201ENST00000243253 DENND2AQ9ULE3 1009 aa13.9□□□□□ -0.18
SEC61A1-201ENST00000243253 PSDA5PKW4 1024 aaPredicted RBP13.9□□□□□ -0.18
SEC61A1-201ENST00000243253 KINO60870 393 aaKnown RBP13.9□□□□□ -0.18
SEC61A1-201ENST00000243253 FGAP02671 866 aa13.9□□□□□ -0.18
SEC61A1-201ENST00000243253 HSP90AA4PQ58FG1 418 aa13.9□□□□□ -0.18
SEC61A1-201ENST00000243253 ABCC12Q96J65 1359 aa13.9□□□□□ -0.18
SEC61A1-201ENST00000243253 POLR3DP05423 398 aaPredicted RBP13.9□□□□□ -0.18
SEC61A1-201ENST00000243253 ME1P48163 572 aa13.9□□□□□ -0.18
SEC61A1-201ENST00000243253 PUS7LQ9H0K6 701 aaKnown RBP13.9□□□□□ -0.18
SEC61A1-201ENST00000243253 ITGB4P16144 1822 aa13.89□□□□□ -0.19
SEC61A1-201ENST00000243253 BIN1O00499 593 aa13.89□□□□□ -0.19
SEC61A1-201ENST00000243253 GSDMDP57764 484 aa13.89□□□□□ -0.19
SEC61A1-201ENST00000243253 NLRP12P59046 1061 aa13.89□□□□□ -0.19
SEC61A1-201ENST00000243253 GABPB1Q06547 395 aaPredicted RBP13.89□□□□□ -0.19
SEC61A1-201ENST00000243253 CCDC73Q6ZRK6 1079 aa13.89□□□□□ -0.19
SEC61A1-201ENST00000243253 CEP57L1Q8IYX8 460 aa13.89□□□□□ -0.19
SEC61A1-201ENST00000243253 CMA1P23946 247 aa13.89□□□□□ -0.19
SEC61A1-201ENST00000243253 ZNF397Q8NF99 534 aaPredicted RBP13.89□□□□□ -0.19
SEC61A1-201ENST00000243253 IKBKBO14920 756 aa13.89□□□□□ -0.19
SEC61A1-201ENST00000243253 ZNF202O95125 648 aa13.89□□□□□ -0.19
SEC61A1-201ENST00000243253 ADORA1P30542 326 aa13.89□□□□□ -0.19
SEC61A1-201ENST00000243253 SLIT2O94813 1529 aa13.89□□□□□ -0.19
SEC61A1-201ENST00000243253 BMP6P22004 513 aa13.88□□□□□ -0.19
SEC61A1-201ENST00000243253 MDM2Q00987 491 aaPredicted RBP13.88□□□□□ -0.19
SEC61A1-201ENST00000243253 PTPN21Q16825 1174 aa13.88□□□□□ -0.19
SEC61A1-201ENST00000243253 RRP12Q5JTH9 1297 aaKnown RBP13.88□□□□□ -0.19
SEC61A1-201ENST00000243253 FILIP1Q7Z7B0 1213 aa13.88□□□□□ -0.19
SEC61A1-201ENST00000243253 FOXP4Q8IVH2 680 aaPredicted RBP13.88□□□□□ -0.19
SEC61A1-201ENST00000243253 KCNG4Q8TDN1 519 aa13.88□□□□□ -0.19
SEC61A1-201ENST00000243253 TIGD1Q96MW7 591 aa13.88□□□□□ -0.19
SEC61A1-201ENST00000243253 ISCA1Q9BUE6 129 aa13.88□□□□□ -0.19
SEC61A1-201ENST00000243253 INTS13Q9NVM9 706 aa13.88□□□□□ -0.19
SEC61A1-201ENST00000243253 MTMR7Q9Y216 660 aa13.88□□□□□ -0.19
SEC61A1-201ENST00000243253 ELF2Q15723 593 aa13.88□□□□□ -0.19
SEC61A1-201ENST00000243253 SHC4Q6S5L8 630 aa13.88□□□□□ -0.19
SEC61A1-201ENST00000243253 BRAPQ7Z569 592 aa13.88□□□□□ -0.19
SEC61A1-201ENST00000243253 TRMT1Q9NXH9 659 aaKnown RBP13.88□□□□□ -0.19
SEC61A1-201ENST00000243253 NID2Q14112 1375 aa13.88□□□□□ -0.19
SEC61A1-201ENST00000243253 PLCH1Q4KWH8 1693 aa13.88□□□□□ -0.19
SEC61A1-201ENST00000243253 PFKFB1P16118 471 aa13.88□□□□□ -0.19
SEC61A1-201ENST00000243253 SF3A1Q15459 793 aaKnown RBP13.88□□□□□ -0.19
SEC61A1-201ENST00000243253 NTRK3Q16288 839 aa13.88□□□□□ -0.19
SEC61A1-201ENST00000243253 CCDC191Q8NCU4 936 aa13.88□□□□□ -0.19
SEC61A1-201ENST00000243253 CWC25Q9NXE8 425 aaPredicted RBP13.88□□□□□ -0.19
SEC61A1-201ENST00000243253 FHOD1Q9Y613 1164 aa13.88□□□□□ -0.19
SEC61A1-201ENST00000243253 NUP98P52948 1817 aa13.87□□□□□ -0.19
SEC61A1-201ENST00000243253 SPTLC2O15270 562 aa13.87□□□□□ -0.19
SEC61A1-201ENST00000243253 IFIT1P09914 478 aaKnown RBP13.87□□□□□ -0.19
SEC61A1-201ENST00000243253 DCCP43146 1447 aa13.87□□□□□ -0.19
SEC61A1-201ENST00000243253 SLC39A14Q15043 492 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms