RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 CCDC174Q6PII3 467 aa14.48□□□□□ -0.09
VAMP4-201ENST00000236192 C11orf57Q6ZUT1 292 aaPredicted RBP14.48□□□□□ -0.09
VAMP4-201ENST00000236192 STMN2Q93045 179 aa14.48□□□□□ -0.09
VAMP4-201ENST00000236192 DESI2Q9BSY9 194 aa14.48□□□□□ -0.09
VAMP4-201ENST00000236192 TNNC1P63316 161 aa14.48□□□□□ -0.09
VAMP4-201ENST00000236192 INTS8Q75QN2 995 aaKnown RBP14.48□□□□□ -0.09
VAMP4-201ENST00000236192 TCP11Q8WWU5 503 aa14.48□□□□□ -0.09
VAMP4-201ENST00000236192 FAM184BQ9ULE4 1060 aa14.48□□□□□ -0.09
VAMP4-201ENST00000236192 STK38LQ9Y2H1 464 aa14.48□□□□□ -0.09
VAMP4-201ENST00000236192 TDRD9Q8NDG6 1382 aaKnown RBP14.48□□□□□ -0.09
VAMP4-201ENST00000236192 MEFVO15553 781 aaPredicted RBP14.48□□□□□ -0.09
VAMP4-201ENST00000236192 PPP1R12BO60237 982 aaPredicted RBP14.48□□□□□ -0.09
VAMP4-201ENST00000236192 NBPF14Q5TI25 921 aa14.48□□□□□ -0.09
VAMP4-201ENST00000236192 UBLCP1Q8WVY7 318 aaPredicted RBP14.48□□□□□ -0.09
VAMP4-201ENST00000236192 ADKP55263 362 aaKnown RBP14.48□□□□□ -0.09
VAMP4-201ENST00000236192 UBE4AQ14139 1066 aa14.48□□□□□ -0.09
VAMP4-201ENST00000236192 GNPTABQ3T906 1256 aa14.48□□□□□ -0.09
VAMP4-201ENST00000236192 DDX46Q7L014 1031 aaKnown RBP14.48□□□□□ -0.09
VAMP4-201ENST00000236192 OSBPL5Q9H0X9 879 aaPredicted RBP14.48□□□□□ -0.09
VAMP4-201ENST00000236192 SCAF11Q99590 1463 aaKnown RBP14.48□□□□□ -0.09
VAMP4-201ENST00000236192 CADPSQ9ULU8 1353 aa14.48□□□□□ -0.09
VAMP4-201ENST00000236192 LRRC31Q6UY01 552 aa14.47□□□□□ -0.09
VAMP4-201ENST00000236192 MIEF2Q96C03 454 aa14.47□□□□□ -0.09
VAMP4-201ENST00000236192 ZMAT2Q96NC0 199 aaKnown RBP14.47□□□□□ -0.09
VAMP4-201ENST00000236192 PRAG1Q86YV5 1406 aa14.47□□□□□ -0.09
VAMP4-201ENST00000236192 PRPF38AQ8NAV1 312 aaKnown RBP14.47□□□□□ -0.09
VAMP4-201ENST00000236192 UBAC1Q9BSL1 405 aa14.47□□□□□ -0.09
VAMP4-201ENST00000236192 PAX7P23759 505 aa14.47□□□□□ -0.09
VAMP4-201ENST00000236192 CCDC51Q96ER9 411 aa14.47□□□□□ -0.09
VAMP4-201ENST00000236192 FAM114A2Q9NRY5 505 aa14.47□□□□□ -0.09
VAMP4-201ENST00000236192 KIAA1468Q9P260 1216 aa14.47□□□□□ -0.09
VAMP4-201ENST00000236192 ANAPC4Q9UJX5 808 aa14.47□□□□□ -0.09
VAMP4-201ENST00000236192 TBC1D8O95759 1140 aa14.47□□□□□ -0.09
VAMP4-201ENST00000236192 HIBCHQ6NVY1 386 aaPredicted RBP14.47□□□□□ -0.09
VAMP4-201ENST00000236192 MEIS3Q99687 375 aa14.47□□□□□ -0.09
VAMP4-201ENST00000236192 NSD2O96028 1365 aa14.47□□□□□ -0.09
VAMP4-201ENST00000236192 TRIM21P19474 475 aaKnown RBP14.46□□□□□ -0.09
VAMP4-201ENST00000236192 ANKRD24Q8TF21 1146 aa14.46□□□□□ -0.09
VAMP4-201ENST00000236192 L2HGDHQ9H9P8 463 aa14.46□□□□□ -0.09
VAMP4-201ENST00000236192 ECHDC1Q9NTX5 307 aa14.46□□□□□ -0.09
VAMP4-201ENST00000236192 BSDC1Q9NW68 430 aaPredicted RBP14.46□□□□□ -0.09
VAMP4-201ENST00000236192 MYO1AQ9UBC5 1043 aa14.46□□□□□ -0.09
VAMP4-201ENST00000236192 MBIPQ9NS73 344 aa14.46□□□□□ -0.09
VAMP4-201ENST00000236192 SCOCQ9UIL1 159 aa14.46□□□□□ -0.09
VAMP4-201ENST00000236192 ANKRD62A6NC57 917 aa14.46□□□□□ -0.09
VAMP4-201ENST00000236192 AKR1B10O60218 316 aa14.46□□□□□ -0.09
VAMP4-201ENST00000236192 ZBTB10Q96DT7 871 aa14.46□□□□□ -0.09
VAMP4-201ENST00000236192 EPC1Q9H2F5 836 aa14.46□□□□□ -0.09
VAMP4-201ENST00000236192 NEUROD6Q96NK8 337 aa14.46□□□□□ -0.1
VAMP4-201ENST00000236192 CPA1P15085 419 aa14.45□□□□□ -0.1
VAMP4-201ENST00000236192 KCNJ6P48051 423 aa14.45□□□□□ -0.1
VAMP4-201ENST00000236192 ALS2CLQ60I27 953 aa14.45□□□□□ -0.1
VAMP4-201ENST00000236192 CEP63Q96MT8 703 aa14.45□□□□□ -0.1
VAMP4-201ENST00000236192 SELENOOQ9BVL4 669 aa14.45□□□□□ -0.1
VAMP4-201ENST00000236192 RASSF10A6NK89 507 aa14.45□□□□□ -0.1
VAMP4-201ENST00000236192 CAND2O75155 1236 aa14.45□□□□□ -0.1
VAMP4-201ENST00000236192 PRR29P0C7W0 189 aa14.45□□□□□ -0.1
VAMP4-201ENST00000236192 CREB3L3Q68CJ9 461 aa14.45□□□□□ -0.1
VAMP4-201ENST00000236192 CCDC197Q8NCU1 140 aa14.45□□□□□ -0.1
VAMP4-201ENST00000236192 TCEANC2Q96MN5 208 aa14.45□□□□□ -0.1
VAMP4-201ENST00000236192 CD248Q9HCU0 757 aa14.45□□□□□ -0.1
VAMP4-201ENST00000236192 PALD1Q9ULE6 856 aa14.45□□□□□ -0.1
VAMP4-201ENST00000236192 SEMA3FQ13275 785 aa14.45□□□□□ -0.1
VAMP4-201ENST00000236192 FAM135BQ49AJ0 1406 aa14.45□□□□□ -0.1
VAMP4-201ENST00000236192 CUL3Q13618 768 aa14.45□□□□□ -0.1
VAMP4-201ENST00000236192 TDRD12Q587J7 1177 aaKnown RBP14.45□□□□□ -0.1
VAMP4-201ENST00000236192 AMPHP49418 695 aa14.45□□□□□ -0.1
VAMP4-201ENST00000236192 MTMR3Q13615 1198 aa14.45□□□□□ -0.1
VAMP4-201ENST00000236192 Q6ZUG5 572 aa14.45□□□□□ -0.1
VAMP4-201ENST00000236192 JAKMIP2Q96AA8 810 aa14.45□□□□□ -0.1
VAMP4-201ENST00000236192 KDM5DQ9BY66 1539 aa14.44□□□□□ -0.1
VAMP4-201ENST00000236192 MINK1Q8N4C8 1332 aaPredicted RBP14.44□□□□□ -0.1
VAMP4-201ENST00000236192 MYO1EQ12965 1108 aa14.44□□□□□ -0.1
VAMP4-201ENST00000236192 BRAPQ7Z569 592 aa14.44□□□□□ -0.1
VAMP4-201ENST00000236192 VIPAS39Q9H9C1 493 aa14.44□□□□□ -0.1
VAMP4-201ENST00000236192 EFCAB2Q5VUJ9 269 aa14.44□□□□□ -0.1
VAMP4-201ENST00000236192 TMED8Q6PL24 325 aaPredicted RBP14.44□□□□□ -0.1
VAMP4-201ENST00000236192 PHAXQ9H814 394 aaKnown RBP14.44□□□□□ -0.1
VAMP4-201ENST00000236192 NUP160Q12769 1436 aa14.44□□□□□ -0.1
VAMP4-201ENST00000236192 NUTM2FA1L443 756 aa14.44□□□□□ -0.1
VAMP4-201ENST00000236192 MARCKSP29966 332 aaPredicted RBP14.44□□□□□ -0.1
VAMP4-201ENST00000236192 ZBTB17Q13105 803 aa14.44□□□□□ -0.1
VAMP4-201ENST00000236192 SEPT2Q15019 361 aa14.44□□□□□ -0.1
VAMP4-201ENST00000236192 IFI16Q16666 785 aaKnown RBP14.44□□□□□ -0.1
VAMP4-201ENST00000236192 NUTM2GQ5VZR2 741 aa14.44□□□□□ -0.1
VAMP4-201ENST00000236192 KCTD16Q68DU8 428 aa14.44□□□□□ -0.1
VAMP4-201ENST00000236192 HOOK3Q86VS8 718 aa14.44□□□□□ -0.1
VAMP4-201ENST00000236192 WWC3Q9ULE0 1092 aa14.44□□□□□ -0.1
VAMP4-201ENST00000236192 KDM5CP41229 1560 aa14.44□□□□□ -0.1
VAMP4-201ENST00000236192 GGCXP38435 758 aa14.44□□□□□ -0.1
VAMP4-201ENST00000236192 CCZ1BP86790 482 aa14.44□□□□□ -0.1
VAMP4-201ENST00000236192 CCZ1P86791 482 aaPredicted RBP14.44□□□□□ -0.1
VAMP4-201ENST00000236192 NBPF10Q6P3W6 841 aaKnown RBP14.44□□□□□ -0.1
VAMP4-201ENST00000236192 CCDC42Q96M95 316 aa14.44□□□□□ -0.1
VAMP4-201ENST00000236192 AOX1Q06278 1338 aa14.43□□□□□ -0.1
VAMP4-201ENST00000236192 MACROD2A1Z1Q3 448 aa14.43□□□□□ -0.1
VAMP4-201ENST00000236192 NNTQ13423 1086 aa14.43□□□□□ -0.1
VAMP4-201ENST00000236192 VAMP4O75379 141 aa14.43□□□□□ -0.1
VAMP4-201ENST00000236192 DNAJC8O75937 253 aaPredicted RBP14.43□□□□□ -0.1
VAMP4-201ENST00000236192 ALDH3A1P30838 453 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms