RNA–Protein interactions for RNA: ENST00000231526.8

TRAPPC13-201, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRAPPC13, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-201ENST00000231526 FOXD4Q12950 439 aaPredicted RBP6.44□□□□□ -1.38
TRAPPC13-201ENST00000231526 NFKBIBQ15653 356 aa6.44□□□□□ -1.38
TRAPPC13-201ENST00000231526 ATP2B3Q16720 1220 aa6.44□□□□□ -1.38
TRAPPC13-201ENST00000231526 CCDC152Q4G0S7 254 aa6.44□□□□□ -1.38
TRAPPC13-201ENST00000231526 TTC39AQ5SRH9 613 aa6.44□□□□□ -1.38
TRAPPC13-201ENST00000231526 RC3H1Q5TC82 1133 aaKnown RBP6.44□□□□□ -1.38
TRAPPC13-201ENST00000231526 KRT27Q7Z3Y8 459 aa6.44□□□□□ -1.38
TRAPPC13-201ENST00000231526 SETDB2Q96T68 719 aa6.44□□□□□ -1.38
TRAPPC13-201ENST00000231526 UPF3BQ9BZI7 483 aaKnown RBP6.44□□□□□ -1.38
TRAPPC13-201ENST00000231526 LSG1Q9H089 658 aaKnown RBP6.44□□□□□ -1.38
TRAPPC13-201ENST00000231526 SEC31BQ9NQW1 1179 aa6.44□□□□□ -1.38
TRAPPC13-201ENST00000231526 PAG1Q9NWQ8 432 aa6.44□□□□□ -1.38
TRAPPC13-201ENST00000231526 PPP1R1BQ9UD71 204 aaPredicted RBP6.44□□□□□ -1.38
TRAPPC13-201ENST00000231526 SRP68Q9UHB9 627 aaKnown RBP6.44□□□□□ -1.38
TRAPPC13-201ENST00000231526 EPB41L2O43491 1005 aaKnown RBP6.44□□□□□ -1.38
TRAPPC13-201ENST00000231526 PDE8BO95263 885 aa6.44□□□□□ -1.38
TRAPPC13-201ENST00000231526 ADORA1P30542 326 aa6.44□□□□□ -1.38
TRAPPC13-201ENST00000231526 RFC4P35249 363 aa6.44□□□□□ -1.38
TRAPPC13-201ENST00000231526 IGHMBP2P38935 993 aaKnown RBP6.44□□□□□ -1.38
TRAPPC13-201ENST00000231526 PTH1RQ03431 593 aa6.44□□□□□ -1.38
TRAPPC13-201ENST00000231526 TBC1D9BQ66K14 1250 aa6.44□□□□□ -1.38
TRAPPC13-201ENST00000231526 FAM196AQ6ZSG2 479 aa6.44□□□□□ -1.38
TRAPPC13-201ENST00000231526 KBTBD3Q8NAB2 608 aa6.44□□□□□ -1.38
TRAPPC13-201ENST00000231526 HELBQ8NG08 1087 aaPredicted RBP6.44□□□□□ -1.38
TRAPPC13-201ENST00000231526 EPS8L1Q8TE68 723 aa6.44□□□□□ -1.38
TRAPPC13-201ENST00000231526 MRRFQ96E11 262 aaKnown RBP6.44□□□□□ -1.38
TRAPPC13-201ENST00000231526 PCMTD1Q96MG8 357 aaPredicted RBP6.44□□□□□ -1.38
TRAPPC13-201ENST00000231526 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.44□□□□□ -1.38
TRAPPC13-201ENST00000231526 ANTXR1Q9H6X2 564 aa6.44□□□□□ -1.38
TRAPPC13-201ENST00000231526 HMX1Q9NP08 348 aaPredicted RBP6.44□□□□□ -1.38
TRAPPC13-201ENST00000231526 NARFQ9UHQ1 456 aa6.44□□□□□ -1.38
TRAPPC13-201ENST00000231526 RPS6KL1Q9Y6S9 549 aa6.44□□□□□ -1.38
TRAPPC13-201ENST00000231526 ZNF609O15014 1411 aa6.43□□□□□ -1.38
TRAPPC13-201ENST00000231526 SREK1Q8WXA9 508 aaKnown RBP6.43□□□□□ -1.38
TRAPPC13-201ENST00000231526 COL5A3P25940 1745 aaPredicted RBP6.43□□□□□ -1.38
TRAPPC13-201ENST00000231526 CCDC171Q6TFL3 1326 aa6.43□□□□□ -1.38
TRAPPC13-201ENST00000231526 PPFIA4O75335 1185 aa6.43□□□□□ -1.38
TRAPPC13-201ENST00000231526 CHGBP05060 677 aa6.43□□□□□ -1.38
TRAPPC13-201ENST00000231526 ZKSCAN1P17029 563 aaPredicted RBP6.43□□□□□ -1.38
TRAPPC13-201ENST00000231526 ERFEQ4G0M1 354 aa6.43□□□□□ -1.38
TRAPPC13-201ENST00000231526 TRAPPC3LQ5T215 181 aa6.43□□□□□ -1.38
TRAPPC13-201ENST00000231526 PRPF40BQ6NWY9 871 aaKnown RBP6.43□□□□□ -1.38
TRAPPC13-201ENST00000231526 ZNF589Q86UQ0 364 aaPredicted RBP6.43□□□□□ -1.38
TRAPPC13-201ENST00000231526 AMIGO3Q86WK7 504 aa6.43□□□□□ -1.38
TRAPPC13-201ENST00000231526 NBPF5PQ86XG9 351 aaPredicted RBP6.43□□□□□ -1.38
TRAPPC13-201ENST00000231526 KHSRPQ92945 711 aaKnown RBP eCLIP6.43□□□□□ -1.385e-6■■■□□ 15.3
TRAPPC13-201ENST00000231526 LRRC4BQ9NT99 713 aa6.43□□□□□ -1.38
TRAPPC13-201ENST00000231526 CHMP5Q9NZZ3 219 aa6.43□□□□□ -1.38
TRAPPC13-201ENST00000231526 COLQQ9Y215 455 aaPredicted RBP6.43□□□□□ -1.38
TRAPPC13-201ENST00000231526 NHSQ6T4R5 1651 aa6.43□□□□□ -1.38
TRAPPC13-201ENST00000231526 SNAP23O00161 211 aa6.42□□□□□ -1.38
TRAPPC13-201ENST00000231526 EVI5O60447 810 aa6.42□□□□□ -1.38
TRAPPC13-201ENST00000231526 FRAT2O75474 233 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC13-201ENST00000231526 TAF5LO75529 589 aa6.42□□□□□ -1.38
TRAPPC13-201ENST00000231526 GUCA2AQ02747 115 aa6.42□□□□□ -1.38
TRAPPC13-201ENST00000231526 CCDC24Q8N4L8 307 aa6.42□□□□□ -1.38
TRAPPC13-201ENST00000231526 SEC62Q99442 399 aaKnown RBP6.42□□□□□ -1.38
TRAPPC13-201ENST00000231526 BCL2L12Q9HB09 334 aa6.42□□□□□ -1.38
TRAPPC13-201ENST00000231526 SBF2Q86WG5 1849 aa6.42□□□□□ -1.38
TRAPPC13-201ENST00000231526 MROH5Q6ZUA9 1318 aa6.42□□□□□ -1.38
TRAPPC13-201ENST00000231526 RBM6P78332 1123 aaKnown RBP6.42□□□□□ -1.38
TRAPPC13-201ENST00000231526 ZNF772Q68DY9 489 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC13-201ENST00000231526 TPTE2Q6XPS3 522 aa6.42□□□□□ -1.38
TRAPPC13-201ENST00000231526 GLMNQ92990 594 aa6.42□□□□□ -1.38
TRAPPC13-201ENST00000231526 NLRP3Q96P20 1036 aa6.42□□□□□ -1.38
TRAPPC13-201ENST00000231526 CDC5LQ99459 802 aaKnown RBP6.42□□□□□ -1.38
TRAPPC13-201ENST00000231526 NYXQ9GZU5 481 aa6.42□□□□□ -1.38
TRAPPC13-201ENST00000231526 RBM8AQ9Y5S9 174 aaKnown RBP6.42□□□□□ -1.38
TRAPPC13-201ENST00000231526 SNX14Q9Y5W7 946 aa6.42□□□□□ -1.38
TRAPPC13-201ENST00000231526 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.41□□□□□ -1.38
TRAPPC13-201ENST00000231526 CASTP20810 708 aaKnown RBP6.41□□□□□ -1.38
TRAPPC13-201ENST00000231526 RFC5P40937 340 aa6.41□□□□□ -1.38
TRAPPC13-201ENST00000231526 ZAP70P43403 619 aa6.41□□□□□ -1.38
TRAPPC13-201ENST00000231526 MCM2P49736 904 aa6.41□□□□□ -1.38
TRAPPC13-201ENST00000231526 PUM3Q15397 648 aaKnown RBP6.41□□□□□ -1.38
TRAPPC13-201ENST00000231526 LRRFIP1Q32MZ4 808 aaKnown RBP6.41□□□□□ -1.38
TRAPPC13-201ENST00000231526 SLFNL1Q499Z3 407 aa6.41□□□□□ -1.38
TRAPPC13-201ENST00000231526 MCMDC2Q4G0Z9 681 aa6.41□□□□□ -1.38
TRAPPC13-201ENST00000231526 RNF20Q5VTR2 975 aa6.41□□□□□ -1.38
TRAPPC13-201ENST00000231526 PI16Q6UXB8 463 aa6.41□□□□□ -1.38
TRAPPC13-201ENST00000231526 CCDC129Q6ZRS4 1044 aa6.41□□□□□ -1.38
TRAPPC13-201ENST00000231526 METTL3Q86U44 580 aaKnown RBP6.41□□□□□ -1.38
TRAPPC13-201ENST00000231526 VGLL2Q8N8G2 317 aa6.41□□□□□ -1.38
TRAPPC13-201ENST00000231526 MAP4K1Q92918 833 aa6.41□□□□□ -1.38
TRAPPC13-201ENST00000231526 KLHL42Q9P2K6 505 aa6.41□□□□□ -1.38
TRAPPC13-201ENST00000231526 RIC1Q4ADV7 1423 aa6.41□□□□□ -1.38
TRAPPC13-201ENST00000231526 CICQ96RK0 1608 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC13-201ENST00000231526 ZNF831Q5JPB2 1677 aa6.41□□□□□ -1.38
TRAPPC13-201ENST00000231526 RREB1Q92766 1687 aa6.41□□□□□ -1.38
TRAPPC13-201ENST00000231526 RBM47A0AV96 593 aaKnown RBP6.41□□□□□ -1.38
TRAPPC13-201ENST00000231526 NDUFV2P19404 249 aa6.41□□□□□ -1.38
TRAPPC13-201ENST00000231526 SCARF1Q14162 830 aa6.41□□□□□ -1.38
TRAPPC13-201ENST00000231526 NECTIN1Q15223 517 aa6.41□□□□□ -1.38
TRAPPC13-201ENST00000231526 CCDC102BQ68D86 513 aa6.41□□□□□ -1.38
TRAPPC13-201ENST00000231526 ILDR1Q86SU0 546 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC13-201ENST00000231526 ANKRD18AQ8IVF6 992 aa6.41□□□□□ -1.38
TRAPPC13-201ENST00000231526 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.41□□□□□ -1.38
TRAPPC13-201ENST00000231526 LPIN2Q92539 896 aa6.41□□□□□ -1.38
TRAPPC13-201ENST00000231526 VTI1AQ96AJ9 217 aa6.41□□□□□ -1.38
TRAPPC13-201ENST00000231526 L3MBTL3Q96JM7 780 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms