RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 EDC3Q96F86 508 aaKnown RBP13.26□□□□□ -0.29
CCND1-201ENST00000227507 GJD4Q96KN9 370 aaPredicted RBP13.26□□□□□ -0.29
CCND1-201ENST00000227507 XPO4Q9C0E2 1151 aaKnown RBP13.26□□□□□ -0.29
CCND1-201ENST00000227507 OAS2P29728 719 aaKnown RBP13.25□□□□□ -0.29
CCND1-201ENST00000227507 LRRN4CLQ8ND94 238 aa13.25□□□□□ -0.29
CCND1-201ENST00000227507 ZNF396Q96N95 335 aaPredicted RBP13.25□□□□□ -0.29
CCND1-201ENST00000227507 RASSF4Q9H2L5 321 aa13.25□□□□□ -0.29
CCND1-201ENST00000227507 MARCH6O60337 910 aa13.25□□□□□ -0.29
CCND1-201ENST00000227507 UQCRFS1P1P0C7P4 283 aa13.25□□□□□ -0.29
CCND1-201ENST00000227507 Q6ZUG5 572 aa13.25□□□□□ -0.29
CCND1-201ENST00000227507 CHST3Q7LGC8 479 aa13.25□□□□□ -0.29
CCND1-201ENST00000227507 PI4K2BQ8TCG2 481 aa13.25□□□□□ -0.29
CCND1-201ENST00000227507 EVI5LQ96CN4 794 aa13.25□□□□□ -0.29
CCND1-201ENST00000227507 UBR1Q8IWV7 1749 aa13.25□□□□□ -0.29
CCND1-201ENST00000227507 SSH2Q76I76 1423 aa13.25□□□□□ -0.29
CCND1-201ENST00000227507 ZSCAN29Q8IWY8 852 aaPredicted RBP13.25□□□□□ -0.29
CCND1-201ENST00000227507 TXLNBQ8N3L3 684 aa13.25□□□□□ -0.29
CCND1-201ENST00000227507 PIGBQ92521 554 aa13.25□□□□□ -0.29
CCND1-201ENST00000227507 NCAPD2Q15021 1401 aa13.25□□□□□ -0.29
CCND1-201ENST00000227507 RAD51AP2Q09MP3 1159 aa13.25□□□□□ -0.29
CCND1-201ENST00000227507 TCIRG1Q13488 830 aa13.25□□□□□ -0.29
CCND1-201ENST00000227507 BICC1Q9H694 974 aaKnown RBP13.25□□□□□ -0.29
CCND1-201ENST00000227507 SNRKQ9NRH2 765 aa13.25□□□□□ -0.29
CCND1-201ENST00000227507 CTAGE5O15320 804 aa13.24□□□□□ -0.29
CCND1-201ENST00000227507 CAVIN2O95810 425 aa13.24□□□□□ -0.29
CCND1-201ENST00000227507 GCKRQ14397 625 aa13.24□□□□□ -0.29
CCND1-201ENST00000227507 ZSCAN26Q16670 478 aa13.24□□□□□ -0.29
CCND1-201ENST00000227507 CCDC102AQ96A19 550 aa13.24□□□□□ -0.29
CCND1-201ENST00000227507 ARFGAP3Q9NP61 516 aa13.24□□□□□ -0.29
CCND1-201ENST00000227507 TCHHQ07283 1943 aa13.24□□□□□ -0.29
CCND1-201ENST00000227507 TTF1Q15361 905 aaPredicted RBP13.24□□□□□ -0.29
CCND1-201ENST00000227507 OTUD7BQ6GQQ9 843 aa13.24□□□□□ -0.29
CCND1-201ENST00000227507 NCOA5Q9HCD5 579 aaKnown RBP13.24□□□□□ -0.29
CCND1-201ENST00000227507 PDE8AO60658 829 aa13.23□□□□□ -0.29
CCND1-201ENST00000227507 SLF2Q8IX21 1173 aa13.23□□□□□ -0.29
CCND1-201ENST00000227507 RASSF8Q8NHQ8 419 aa13.23□□□□□ -0.29
CCND1-201ENST00000227507 MRFAP1L1Q96HT8 127 aa13.23□□□□□ -0.29
CCND1-201ENST00000227507 NEK1Q96PY6 1258 aa13.23□□□□□ -0.29
CCND1-201ENST00000227507 ANKRD65E5RJM6 399 aa13.23□□□□□ -0.29
CCND1-201ENST00000227507 GOLIM4O00461 696 aa13.23□□□□□ -0.29
CCND1-201ENST00000227507 HSP90B2PQ58FF3 399 aa13.23□□□□□ -0.29
CCND1-201ENST00000227507 PPP1R13BQ96KQ4 1090 aa13.23□□□□□ -0.29
CCND1-201ENST00000227507 IL6STP40189 918 aaPredicted RBP13.23□□□□□ -0.29
CCND1-201ENST00000227507 CRKLP46109 303 aaKnown RBP13.23□□□□□ -0.29
CCND1-201ENST00000227507 COL9A3Q14050 684 aaPredicted RBP13.23□□□□□ -0.29
CCND1-201ENST00000227507 VPS72Q15906 364 aa13.23□□□□□ -0.29
CCND1-201ENST00000227507 TTLL7Q6ZT98 887 aa13.23□□□□□ -0.29
CCND1-201ENST00000227507 SSH3Q8TE77 659 aa13.23□□□□□ -0.29
CCND1-201ENST00000227507 MTMR7Q9Y216 660 aa13.23□□□□□ -0.29
CCND1-201ENST00000227507 TRIM66O15016 1216 aa13.22□□□□□ -0.29
CCND1-201ENST00000227507 CASQ1P31415 396 aa13.22□□□□□ -0.29
CCND1-201ENST00000227507 CCDC129Q6ZRS4 1044 aa13.22□□□□□ -0.29
CCND1-201ENST00000227507 TICAM2Q86XR7 235 aa13.22□□□□□ -0.29
CCND1-201ENST00000227507 KLHDC4Q8TBB5 520 aa13.22□□□□□ -0.29
CCND1-201ENST00000227507 ZBTB1Q9Y2K1 713 aa13.22□□□□□ -0.29
CCND1-201ENST00000227507 LDHCP07864 332 aa13.22□□□□□ -0.29
CCND1-201ENST00000227507 SMC1AQ14683 1233 aaKnown RBP13.22□□□□□ -0.29
CCND1-201ENST00000227507 FEZ2Q9UHY8 353 aaPredicted RBP13.22□□□□□ -0.29
CCND1-201ENST00000227507 TAF6LQ9Y6J9 622 aa13.22□□□□□ -0.29
CCND1-201ENST00000227507 TOP1P11387 765 aaKnown RBP13.22□□□□□ -0.29
CCND1-201ENST00000227507 RPS6KB1P23443 525 aa13.22□□□□□ -0.29
CCND1-201ENST00000227507 KARSQ15046 597 aaKnown RBP13.22□□□□□ -0.29
CCND1-201ENST00000227507 NOM1Q5C9Z4 860 aaKnown RBP13.22□□□□□ -0.29
CCND1-201ENST00000227507 USP28Q96RU2 1077 aa13.22□□□□□ -0.29
CCND1-201ENST00000227507 VPS18Q9P253 973 aa13.22□□□□□ -0.29
CCND1-201ENST00000227507 HEG1Q9ULI3 1381 aa13.22□□□□□ -0.29
CCND1-201ENST00000227507 A0A0D9SFI3 127 aa13.22□□□□□ -0.29
CCND1-201ENST00000227507 UBASH3AP57075 661 aa13.22□□□□□ -0.29
CCND1-201ENST00000227507 CCDC150Q8NCX0 1101 aa13.22□□□□□ -0.29
CCND1-201ENST00000227507 ARHGEF28Q8N1W1 1705 aaKnown RBP13.21□□□□□ -0.29
CCND1-201ENST00000227507 SIGLEC1Q9BZZ2 1709 aa13.21□□□□□ -0.29
CCND1-201ENST00000227507 KRT32Q14532 448 aa13.21□□□□□ -0.29
CCND1-201ENST00000227507 ZNF446Q9NWS9 450 aa13.21□□□□□ -0.29
CCND1-201ENST00000227507 MYO5BQ9ULV0 1848 aa13.21□□□□□ -0.29
CCND1-201ENST00000227507 USP5P45974 858 aa13.21□□□□□ -0.29
CCND1-201ENST00000227507 IKQ13123 557 aaPredicted RBP13.21□□□□□ -0.29
CCND1-201ENST00000227507 SPTY2D1Q68D10 685 aaPredicted RBP13.21□□□□□ -0.29
CCND1-201ENST00000227507 CPLX3Q8WVH0 158 aa13.21□□□□□ -0.29
CCND1-201ENST00000227507 SMARCE1Q969G3 411 aa13.21□□□□□ -0.29
CCND1-201ENST00000227507 ZC3H12CQ9C0D7 883 aaKnown RBP13.21□□□□□ -0.29
CCND1-201ENST00000227507 PUF60Q9UHX1 559 aaKnown RBP13.21□□□□□ -0.29
CCND1-201ENST00000227507 CYP2C19P33261 490 aa13.21□□□□□ -0.3
CCND1-201ENST00000227507 APOBRQ0VD83 1088 aa13.21□□□□□ -0.3
CCND1-201ENST00000227507 OVOS2A0A0G2JMS6 1433 aa13.21□□□□□ -0.3
CCND1-201ENST00000227507 PALLDQ8WX93 1383 aa13.21□□□□□ -0.3
CCND1-201ENST00000227507 ELP1O95163 1332 aa13.21□□□□□ -0.3
CCND1-201ENST00000227507 ADGRB2O60241 1585 aa13.2□□□□□ -0.3
CCND1-201ENST00000227507 NEURL1BA8MQ27 555 aa13.2□□□□□ -0.3
CCND1-201ENST00000227507 ATP2B1P20020 1258 aa13.2□□□□□ -0.3
CCND1-201ENST00000227507 MARCKSP29966 332 aaPredicted RBP13.2□□□□□ -0.3
CCND1-201ENST00000227507 IMMTQ16891 758 aaKnown RBP13.2□□□□□ -0.3
CCND1-201ENST00000227507 HELBQ8NG08 1087 aaPredicted RBP13.2□□□□□ -0.3
CCND1-201ENST00000227507 ANKRD2Q9GZV1 360 aa13.2□□□□□ -0.3
CCND1-201ENST00000227507 ZSCAN16Q9H4T2 348 aaPredicted RBP13.2□□□□□ -0.3
CCND1-201ENST00000227507 ETF1P62495 437 aaKnown RBP13.2□□□□□ -0.3
CCND1-201ENST00000227507 CCZ1BP86790 482 aa13.2□□□□□ -0.3
CCND1-201ENST00000227507 CCZ1P86791 482 aaPredicted RBP13.2□□□□□ -0.3
CCND1-201ENST00000227507 SLC20A2Q08357 652 aa13.2□□□□□ -0.3
CCND1-201ENST00000227507 RBM17Q96I25 401 aaKnown RBP13.2□□□□□ -0.3
CCND1-201ENST00000227507 CCP110O43303 1012 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms