RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 RBM26Q5T8P6 1007 aaKnown RBP20.15■□□□□ 0.82
EXTL3-201ENST00000220562 C8orf37Q96NL8 207 aa20.15■□□□□ 0.82
EXTL3-201ENST00000220562 PARP1P09874 1014 aaKnown RBP20.15■□□□□ 0.82
EXTL3-201ENST00000220562 DCAF17Q5H9S7 520 aaPredicted RBP20.15■□□□□ 0.82
EXTL3-201ENST00000220562 TPTE2Q6XPS3 522 aa20.15■□□□□ 0.82
EXTL3-201ENST00000220562 ZBTB40Q9NUA8 1239 aa20.15■□□□□ 0.82
EXTL3-201ENST00000220562 VPS18Q9P253 973 aa20.15■□□□□ 0.82
EXTL3-201ENST00000220562 SOS1Q07889 1333 aaPredicted RBP20.15■□□□□ 0.82
EXTL3-201ENST00000220562 VWA3AA6NCI4 1184 aa20.14■□□□□ 0.82
EXTL3-201ENST00000220562 ANKRD2Q9GZV1 360 aa20.14■□□□□ 0.82
EXTL3-201ENST00000220562 ANKS4BQ8N8V4 417 aa20.14■□□□□ 0.81
EXTL3-201ENST00000220562 CPA1P15085 419 aa20.14■□□□□ 0.81
EXTL3-201ENST00000220562 TSGA10Q9BZW7 698 aa20.14■□□□□ 0.81
EXTL3-201ENST00000220562 RNMTO43148 476 aaKnown RBP20.14■□□□□ 0.81
EXTL3-201ENST00000220562 MBD4O95243 580 aa20.14■□□□□ 0.81
EXTL3-201ENST00000220562 RAPGEF1Q13905 1077 aa20.14■□□□□ 0.81
EXTL3-201ENST00000220562 NSFL1CQ9UNZ2 370 aaKnown RBP20.14■□□□□ 0.81
EXTL3-201ENST00000220562 A0A1B0GVL5 298 aa20.14■□□□□ 0.81
EXTL3-201ENST00000220562 HS2ST1Q7LGA3 356 aa20.14■□□□□ 0.81
EXTL3-201ENST00000220562 MAPKBP1O60336 1514 aa20.14■□□□□ 0.81
EXTL3-201ENST00000220562 ELP1O95163 1332 aa20.13■□□□□ 0.81
EXTL3-201ENST00000220562 APBB1IPQ7Z5R6 666 aaPredicted RBP20.13■□□□□ 0.81
EXTL3-201ENST00000220562 UGGT2Q9NYU1 1516 aa20.13■□□□□ 0.81
EXTL3-201ENST00000220562 PPP1R9BQ96SB3 815 aa20.13■□□□□ 0.81
EXTL3-201ENST00000220562 RTCBQ9Y3I0 505 aaKnown RBP20.13■□□□□ 0.81
EXTL3-201ENST00000220562 ZC3H12CQ9C0D7 883 aaKnown RBP20.13■□□□□ 0.81
EXTL3-201ENST00000220562 NPATQ14207 1427 aa20.13■□□□□ 0.81
EXTL3-201ENST00000220562 INTS4Q96HW7 963 aaKnown RBP20.13■□□□□ 0.81
EXTL3-201ENST00000220562 ZFYVE9O95405 1425 aa20.13■□□□□ 0.81
EXTL3-201ENST00000220562 CCT6AP40227 531 aaKnown RBP20.12■□□□□ 0.81
EXTL3-201ENST00000220562 IQUBQ8NA54 791 aa20.12■□□□□ 0.81
EXTL3-201ENST00000220562 PHACTR3Q96KR7 559 aa20.12■□□□□ 0.81
EXTL3-201ENST00000220562 RPS6KB1P23443 525 aa20.12■□□□□ 0.81
EXTL3-201ENST00000220562 PPP1R7Q15435 360 aa20.12■□□□□ 0.81
EXTL3-201ENST00000220562 CCDC114Q96M63 670 aa20.12■□□□□ 0.81
EXTL3-201ENST00000220562 SPATA24Q86W54 205 aa20.12■□□□□ 0.81
EXTL3-201ENST00000220562 LUC7L2Q9Y383 392 aaKnown RBP20.12■□□□□ 0.81
EXTL3-201ENST00000220562 PARP3Q9Y6F1 533 aa20.12■□□□□ 0.81
EXTL3-201ENST00000220562 A2MP01023 1474 aa20.12■□□□□ 0.81
EXTL3-201ENST00000220562 NCBP1Q09161 790 aaKnown RBP20.12■□□□□ 0.81
EXTL3-201ENST00000220562 SV2BQ7L1I2 683 aa20.12■□□□□ 0.81
EXTL3-201ENST00000220562 GTPBP4Q9BZE4 634 aaKnown RBP20.12■□□□□ 0.81
EXTL3-201ENST00000220562 CAPN2P17655 700 aa20.11■□□□□ 0.81
EXTL3-201ENST00000220562 SP4Q02446 784 aa20.11■□□□□ 0.81
EXTL3-201ENST00000220562 CCDC25Q86WR0 208 aa20.11■□□□□ 0.81
EXTL3-201ENST00000220562 EYA1Q99502 592 aa20.11■□□□□ 0.81
EXTL3-201ENST00000220562 CLEC11AQ9Y240 323 aa20.11■□□□□ 0.81
EXTL3-201ENST00000220562 ATP6V0A2Q9Y487 856 aa20.11■□□□□ 0.81
EXTL3-201ENST00000220562 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.11■□□□□ 0.81
EXTL3-201ENST00000220562 LETM2Q2VYF4 491 aa20.11■□□□□ 0.81
EXTL3-201ENST00000220562 DNAJC21Q5F1R6 531 aaKnown RBP20.11■□□□□ 0.81
EXTL3-201ENST00000220562 CCDC121Q6ZUS5 278 aa20.11■□□□□ 0.81
EXTL3-201ENST00000220562 TTC14Q96N46 770 aa20.11■□□□□ 0.81
EXTL3-201ENST00000220562 PKD2L1Q9P0L9 805 aa20.11■□□□□ 0.81
EXTL3-201ENST00000220562 WWC3Q9ULE0 1092 aa20.11■□□□□ 0.81
EXTL3-201ENST00000220562 SEC24BO95487 1268 aa20.11■□□□□ 0.81
EXTL3-201ENST00000220562 AKR1B15C9JRZ8 316 aaPredicted RBP20.1■□□□□ 0.81
EXTL3-201ENST00000220562 ECM2O94769 699 aaPredicted RBP20.1■□□□□ 0.81
EXTL3-201ENST00000220562 HOXC9P31274 260 aa20.1■□□□□ 0.81
EXTL3-201ENST00000220562 GRM1Q13255 1194 aa20.1■□□□□ 0.81
EXTL3-201ENST00000220562 DCAF5Q96JK2 942 aa20.1■□□□□ 0.81
EXTL3-201ENST00000220562 BAG1Q99933 345 aaPredicted RBP20.1■□□□□ 0.81
EXTL3-201ENST00000220562 PCDH11XQ9BZA7 1347 aa20.1■□□□□ 0.81
EXTL3-201ENST00000220562 PCDH11YQ9BZA8 1340 aa20.1■□□□□ 0.81
EXTL3-201ENST00000220562 ZBTB16Q05516 673 aa20.1■□□□□ 0.81
EXTL3-201ENST00000220562 B4E1Z4 1266 aa20.09■□□□□ 0.81
EXTL3-201ENST00000220562 MAP3K9P80192 1104 aa20.09■□□□□ 0.81
EXTL3-201ENST00000220562 RAB3IL1Q8TBN0 382 aa20.09■□□□□ 0.81
EXTL3-201ENST00000220562 BIVM-ERCC5R4GMW8 1640 aa20.09■□□□□ 0.81
EXTL3-201ENST00000220562 ZNF608Q9ULD9 1512 aaPredicted RBP20.09■□□□□ 0.81
EXTL3-201ENST00000220562 CCDC65Q8IXS2 484 aa20.09■□□□□ 0.81
EXTL3-201ENST00000220562 RBM17Q96I25 401 aaKnown RBP20.09■□□□□ 0.81
EXTL3-201ENST00000220562 GPCPD1Q9NPB8 672 aa20.09■□□□□ 0.81
EXTL3-201ENST00000220562 KCNK9Q9NPC2 374 aa20.09■□□□□ 0.81
EXTL3-201ENST00000220562 SLC27A2O14975 620 aa20.09■□□□□ 0.81
EXTL3-201ENST00000220562 DENND2AQ9ULE3 1009 aa20.09■□□□□ 0.81
EXTL3-201ENST00000220562 CEP83Q9Y592 693 aa20.09■□□□□ 0.81
EXTL3-201ENST00000220562 CNGA4Q8IV77 575 aa20.09■□□□□ 0.81
EXTL3-201ENST00000220562 A0A1W2PP64 1363 aa20.09■□□□□ 0.81
EXTL3-201ENST00000220562 PTPRKQ15262 1439 aa20.09■□□□□ 0.81
EXTL3-201ENST00000220562 B4DLN1 442 aa20.09■□□□□ 0.81
EXTL3-201ENST00000220562 KRT5P13647 590 aa20.09■□□□□ 0.81
EXTL3-201ENST00000220562 MRPL12P52815 198 aaKnown RBP20.09■□□□□ 0.81
EXTL3-201ENST00000220562 MYL5Q02045 173 aa20.09■□□□□ 0.81
EXTL3-201ENST00000220562 MICALL1Q8N3F8 863 aa20.09■□□□□ 0.81
EXTL3-201ENST00000220562 DDX23Q9BUQ8 820 aaKnown RBP20.09■□□□□ 0.81
EXTL3-201ENST00000220562 NOC4LQ9BVI4 516 aaKnown RBP20.09■□□□□ 0.81
EXTL3-201ENST00000220562 PODXL2Q9NZ53 605 aa20.09■□□□□ 0.81
EXTL3-201ENST00000220562 FRMD4BQ9Y2L6 1034 aa20.09■□□□□ 0.81
EXTL3-201ENST00000220562 CCDC122Q5T0U0 273 aa20.08■□□□□ 0.81
EXTL3-201ENST00000220562 UBLCP1Q8WVY7 318 aaPredicted RBP20.08■□□□□ 0.81
EXTL3-201ENST00000220562 ZEB2O60315 1214 aa20.08■□□□□ 0.81
EXTL3-201ENST00000220562 NBPF11Q86T75 865 aa20.08■□□□□ 0.81
EXTL3-201ENST00000220562 MSANTD4Q8NCY6 345 aa20.08■□□□□ 0.81
EXTL3-201ENST00000220562 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.08■□□□□ 0.81
EXTL3-201ENST00000220562 ARMT1Q9H993 441 aa20.08■□□□□ 0.81
EXTL3-201ENST00000220562 NDC80O14777 642 aa20.08■□□□□ 0.81
EXTL3-201ENST00000220562 TNNC1P63316 161 aa20.08■□□□□ 0.81
EXTL3-201ENST00000220562 NAP1L4Q99733 375 aaKnown RBP20.08■□□□□ 0.81
EXTL3-201ENST00000220562 SEL1L2Q5TEA6 688 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms