RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 NEUROD6Q96NK8 337 aa21.43■■□□□ 1.02
MRPL28-201ENST00000199706 TLL2Q9Y6L7 1015 aa21.43■■□□□ 1.02
MRPL28-201ENST00000199706 RAB11FIP3O75154 756 aa21.42■■□□□ 1.02
MRPL28-201ENST00000199706 CRKP46108 304 aa21.42■■□□□ 1.02
MRPL28-201ENST00000199706 FKBP1BP68106 108 aa21.42■■□□□ 1.02
MRPL28-201ENST00000199706 AAMPQ13685 434 aa21.42■■□□□ 1.02
MRPL28-201ENST00000199706 ZDHHC15Q96MV8 337 aa21.42■■□□□ 1.02
MRPL28-201ENST00000199706 AKAP11Q9UKA4 1901 aa21.42■■□□□ 1.02
MRPL28-201ENST00000199706 SPDYE2Q495Y8 402 aa21.41■■□□□ 1.02
MRPL28-201ENST00000199706 GORABQ5T7V8 394 aa21.41■■□□□ 1.02
MRPL28-201ENST00000199706 SAPCD2Q86UD0 394 aa21.41■■□□□ 1.02
MRPL28-201ENST00000199706 KIF1BPQ96EK5 621 aa21.41■■□□□ 1.02
MRPL28-201ENST00000199706 CDCA5Q96FF9 252 aa21.41■■□□□ 1.02
MRPL28-201ENST00000199706 PRMT6Q96LA8 375 aaPredicted RBP21.41■■□□□ 1.02
MRPL28-201ENST00000199706 EXOC6BQ9Y2D4 811 aa21.41■■□□□ 1.02
MRPL28-201ENST00000199706 PCNTO95613 3336 aa21.41■■□□□ 1.02
MRPL28-201ENST00000199706 FMR1Q06787 632 aaKnown RBP eCLIP21.4■■□□□ 1.02
MRPL28-201ENST00000199706 TNFAIP1Q13829 316 aa21.4■■□□□ 1.02
MRPL28-201ENST00000199706 GRIK5Q16478 980 aa21.4■■□□□ 1.02
MRPL28-201ENST00000199706 LDHBP07195 334 aaKnown RBP21.39■■□□□ 1.01
MRPL28-201ENST00000199706 CCDC158Q5M9N0 1113 aa21.39■■□□□ 1.01
MRPL28-201ENST00000199706 FKBP1CQ5VVH2 108 aa21.39■■□□□ 1.01
MRPL28-201ENST00000199706 SPTY2D1Q68D10 685 aaPredicted RBP21.39■■□□□ 1.01
MRPL28-201ENST00000199706 DBNLQ9UJU6 430 aaKnown RBP21.39■■□□□ 1.01
MRPL28-201ENST00000199706 ABT1Q9ULW3 272 aaKnown RBP21.39■■□□□ 1.01
MRPL28-201ENST00000199706 MAST2Q6P0Q8 1798 aa21.38■■□□□ 1.01
MRPL28-201ENST00000199706 RBM5P52756 815 aaKnown RBP eCLIP21.38■■□□□ 1.01
MRPL28-201ENST00000199706 SPATA5Q8NB90 893 aa21.38■■□□□ 1.01
MRPL28-201ENST00000199706 RHPN1Q8TCX5 695 aa21.38■■□□□ 1.01
MRPL28-201ENST00000199706 EAF2Q96CJ1 260 aaPredicted RBP21.38■■□□□ 1.01
MRPL28-201ENST00000199706 DBNDD2Q9BQY9 259 aa21.38■■□□□ 1.01
MRPL28-201ENST00000199706 GBA2Q9HCG7 927 aaPredicted RBP21.38■■□□□ 1.01
MRPL28-201ENST00000199706 HMG20BQ9P0W2 317 aa21.38■■□□□ 1.01
MRPL28-201ENST00000199706 MYH2Q9UKX2 1941 aa21.37■■□□□ 1.01
MRPL28-201ENST00000199706 PRDX5P30044 214 aa21.37■■□□□ 1.01
MRPL28-201ENST00000199706 DEFB115Q30KQ5 88 aa21.37■■□□□ 1.01
MRPL28-201ENST00000199706 C2orf69Q8N8R5 385 aa21.37■■□□□ 1.01
MRPL28-201ENST00000199706 ECE1P42892 770 aa21.36■■□□□ 1.01
MRPL28-201ENST00000199706 MCAMP43121 646 aa21.36■■□□□ 1.01
MRPL28-201ENST00000199706 APOBEC3HQ6NTF7 200 aaKnown RBP21.36■■□□□ 1.01
MRPL28-201ENST00000199706 SLF2Q8IX21 1173 aa21.36■■□□□ 1.01
MRPL28-201ENST00000199706 CLASRPQ8N2M8 674 aaKnown RBP21.36■■□□□ 1.01
MRPL28-201ENST00000199706 FAM163AQ96GL9 167 aaPredicted RBP21.36■■□□□ 1.01
MRPL28-201ENST00000199706 DEFB129Q9H1M3 183 aa21.36■■□□□ 1.01
MRPL28-201ENST00000199706 PCDHAC2Q9Y5I4 1007 aa21.36■■□□□ 1.01
MRPL28-201ENST00000199706 GAKO14976 1311 aa21.35■■□□□ 1.01
MRPL28-201ENST00000199706 NF2P35240 595 aa21.35■■□□□ 1.01
MRPL28-201ENST00000199706 TTC39AQ5SRH9 613 aa21.35■■□□□ 1.01
MRPL28-201ENST00000199706 ZNF408Q9H9D4 720 aa21.35■■□□□ 1.01
MRPL28-201ENST00000199706 ZNF70Q9UC06 446 aaPredicted RBP21.35■■□□□ 1.01
MRPL28-201ENST00000199706 MKRN1Q9UHC7 482 aaKnown RBP21.35■■□□□ 1.01
MRPL28-201ENST00000199706 RPAP1Q9BWH6 1393 aaPredicted RBP21.35■■□□□ 1.01
MRPL28-201ENST00000199706 AOX1Q06278 1338 aa21.34■■□□□ 1.01
MRPL28-201ENST00000199706 TMED8Q6PL24 325 aaPredicted RBP21.34■■□□□ 1.01
MRPL28-201ENST00000199706 FAM83AQ86UY5 434 aa21.34■■□□□ 1.01
MRPL28-201ENST00000199706 DAGLAQ9Y4D2 1042 aa21.34■■□□□ 1.01
MRPL28-201ENST00000199706 CLRN2A0PK11 232 aa21.33■■□□□ 1.01
MRPL28-201ENST00000199706 TNNI2P48788 182 aa21.33■■□□□ 1.01
MRPL28-201ENST00000199706 VEGFBP49765 207 aa21.33■■□□□ 1.01
MRPL28-201ENST00000199706 DLK2Q6UY11 383 aa21.33■■□□□ 1.01
MRPL28-201ENST00000199706 AACSQ86V21 672 aa21.33■■□□□ 1.01
MRPL28-201ENST00000199706 DZIP1Q86YF9 867 aaKnown RBP21.33■■□□□ 1.01
MRPL28-201ENST00000199706 DCTPP1Q9H773 170 aa21.33■■□□□ 1.01
MRPL28-201ENST00000199706 TDRD3Q9H7E2 651 aaKnown RBP21.33■■□□□ 1.01
MRPL28-201ENST00000199706 TMOD2Q9NZR1 351 aa21.33■■□□□ 1.01
MRPL28-201ENST00000199706 DOCK2Q92608 1830 aa21.32■■□□□ 1
MRPL28-201ENST00000199706 UNCXA6NJT0 531 aa21.32■■□□□ 1
MRPL28-201ENST00000199706 MAP4K4O95819 1239 aaPredicted RBP21.32■■□□□ 1
MRPL28-201ENST00000199706 HUNKP57058 714 aa21.32■■□□□ 1
MRPL28-201ENST00000199706 ERICH6Q7L0X2 663 aa21.32■■□□□ 1
MRPL28-201ENST00000199706 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.32■■□□□ 1
MRPL28-201ENST00000199706 VEZTQ9HBM0 779 aa21.32■■□□□ 1
MRPL28-201ENST00000199706 TLR7Q9NYK1 1049 aaKnown RBP21.32■■□□□ 1
MRPL28-201ENST00000199706 ABCF2Q9UG63 623 aa21.32■■□□□ 1
MRPL28-201ENST00000199706 SSC5DA1L4H1 1573 aa21.31■■□□□ 1
MRPL28-201ENST00000199706 WDR33Q9C0J8 1336 aaKnown RBP21.31■■□□□ 1
MRPL28-201ENST00000199706 GSTO1P78417 241 aa21.31■■□□□ 1
MRPL28-201ENST00000199706 RASA3Q14644 834 aa21.31■■□□□ 1
MRPL28-201ENST00000199706 DIXDC1Q155Q3 683 aa21.31■■□□□ 1
MRPL28-201ENST00000199706 SUPT20HL1Q3ZLR7 823 aa21.31■■□□□ 1
MRPL28-201ENST00000199706 PI16Q6UXB8 463 aa21.31■■□□□ 1
MRPL28-201ENST00000199706 CAPNS2Q96L46 248 aa21.31■■□□□ 1
MRPL28-201ENST00000199706 CRBNQ96SW2 442 aa21.31■■□□□ 1
MRPL28-201ENST00000199706 LRRCC1Q9C099 1032 aa21.31■■□□□ 1
MRPL28-201ENST00000199706 CCDC8Q9H0W5 538 aaPredicted RBP21.31■■□□□ 1
MRPL28-201ENST00000199706 MAP3K11Q16584 847 aa21.3■■□□□ 1
MRPL28-201ENST00000199706 IL1RAPL2Q9NP60 686 aa21.3■■□□□ 1
MRPL28-201ENST00000199706 PCDHB15Q9Y5E8 787 aa21.3■■□□□ 1
MRPL28-201ENST00000199706 RFX7Q2KHR2 1363 aa21.3■■□□□ 1
MRPL28-201ENST00000199706 MROH7-TTC4A0A0A0MT08 1334 aa21.29■■□□□ 1
MRPL28-201ENST00000199706 MAP2K2P36507 400 aa21.29■■□□□ 1
MRPL28-201ENST00000199706 MECOMQ03112 1051 aa21.29■■□□□ 1
MRPL28-201ENST00000199706 CCDC102AQ96A19 550 aa21.29■■□□□ 1
MRPL28-201ENST00000199706 NSUN4Q96CB9 384 aaKnown RBP21.29■■□□□ 1
MRPL28-201ENST00000199706 LDHCP07864 332 aa21.28■■□□□ 1
MRPL28-201ENST00000199706 IFIT2P09913 472 aaKnown RBP21.28■■□□□ 1
MRPL28-201ENST00000199706 RGMBQ6NW40 437 aa21.28■■□□□ 1
MRPL28-201ENST00000199706 HOOK2Q96ED9 719 aa21.28■■□□□ 1
MRPL28-201ENST00000199706 TEPSINQ96N21 525 aa21.28■■□□□ 1
MRPL28-201ENST00000199706 SCAF8Q9UPN6 1271 aaKnown RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms