RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 ZSCAN26Q16670 478 aa12.84□□□□□ -0.35
ACTN1-201ENST00000193403 CCDC57Q2TAC2 916 aa12.84□□□□□ -0.35
ACTN1-201ENST00000193403 RSPH14Q9UHP6 348 aa12.84□□□□□ -0.35
ACTN1-201ENST00000193403 SIGLEC1Q9BZZ2 1709 aa12.84□□□□□ -0.35
ACTN1-201ENST00000193403 CDC42BPGQ6DT37 1551 aa12.84□□□□□ -0.35
ACTN1-201ENST00000193403 KIF5CO60282 957 aa12.84□□□□□ -0.35
ACTN1-201ENST00000193403 LINC00301Q8NCQ3 95 aa12.84□□□□□ -0.35
ACTN1-201ENST00000193403 IP6K1Q92551 441 aa12.84□□□□□ -0.35
ACTN1-201ENST00000193403 RABEP2Q9H5N1 569 aa12.84□□□□□ -0.35
ACTN1-201ENST00000193403 ZNF446Q9NWS9 450 aa12.84□□□□□ -0.35
ACTN1-201ENST00000193403 PPP2R2CQ9Y2T4 447 aa12.84□□□□□ -0.35
ACTN1-201ENST00000193403 RAD21O60216 631 aa12.84□□□□□ -0.35
ACTN1-201ENST00000193403 COBLO75128 1261 aa12.84□□□□□ -0.35
ACTN1-201ENST00000193403 PCMTD1Q96MG8 357 aaPredicted RBP12.84□□□□□ -0.35
ACTN1-201ENST00000193403 GDAP1L1Q96MZ0 367 aa12.84□□□□□ -0.35
ACTN1-201ENST00000193403 C19orf44Q9H6X5 657 aa12.84□□□□□ -0.35
ACTN1-201ENST00000193403 RAI14Q9P0K7 980 aa12.84□□□□□ -0.35
ACTN1-201ENST00000193403 IQSEC3Q9UPP2 1182 aaPredicted RBP12.84□□□□□ -0.35
ACTN1-201ENST00000193403 GOLGA8AA7E2F4 631 aa12.83□□□□□ -0.35
ACTN1-201ENST00000193403 HOXB7P09629 217 aa12.83□□□□□ -0.35
ACTN1-201ENST00000193403 ZNF569Q5MCW4 686 aa12.83□□□□□ -0.35
ACTN1-201ENST00000193403 AXDND1Q5T1B0 1012 aaPredicted RBP12.83□□□□□ -0.35
ACTN1-201ENST00000193403 FMR1NBQ8N0W7 255 aaPredicted RBP12.83□□□□□ -0.35
ACTN1-201ENST00000193403 NCOA7Q8NI08 942 aa12.83□□□□□ -0.35
ACTN1-201ENST00000193403 GOLGA1Q92805 767 aa12.83□□□□□ -0.35
ACTN1-201ENST00000193403 SMARCE1Q969G3 411 aa12.83□□□□□ -0.35
ACTN1-201ENST00000193403 NFE2L3Q9Y4A8 694 aa12.83□□□□□ -0.35
ACTN1-201ENST00000193403 CTDNEP1O95476 244 aa12.83□□□□□ -0.36
ACTN1-201ENST00000193403 IARSP41252 1262 aaKnown RBP12.83□□□□□ -0.36
ACTN1-201ENST00000193403 CAGE1Q8TC20 777 aa12.83□□□□□ -0.36
ACTN1-201ENST00000193403 ZNF496Q96IT1 587 aaPredicted RBP12.83□□□□□ -0.36
ACTN1-201ENST00000193403 TMEM51Q9NW97 253 aa12.83□□□□□ -0.36
ACTN1-201ENST00000193403 TMEM94Q12767 1356 aa12.83□□□□□ -0.36
ACTN1-201ENST00000193403 RNF113AO15541 343 aaKnown RBP12.83□□□□□ -0.36
ACTN1-201ENST00000193403 BABAM1Q9NWV8 329 aa12.83□□□□□ -0.36
ACTN1-201ENST00000193403 A0A1B0GUL7 405 aa12.82□□□□□ -0.36
ACTN1-201ENST00000193403 PSDA5PKW4 1024 aaPredicted RBP12.82□□□□□ -0.36
ACTN1-201ENST00000193403 ERLIN1O75477 346 aa12.82□□□□□ -0.36
ACTN1-201ENST00000193403 GRAMD1CQ8IYS0 662 aa12.82□□□□□ -0.36
ACTN1-201ENST00000193403 HINFPQ9BQA5 517 aa12.82□□□□□ -0.36
ACTN1-201ENST00000193403 IRX2Q9BZI1 471 aaPredicted RBP12.82□□□□□ -0.36
ACTN1-201ENST00000193403 OVOS2A0A0J9YW53 1432 aa12.82□□□□□ -0.36
ACTN1-201ENST00000193403 OVOS2Q6IE36 1432 aa12.82□□□□□ -0.36
ACTN1-201ENST00000193403 WWC2Q6AWC2 1192 aa12.82□□□□□ -0.36
ACTN1-201ENST00000193403 ZNF790Q6PG37 636 aa12.82□□□□□ -0.36
ACTN1-201ENST00000193403 RBM43Q6ZSC3 357 aaKnown RBP12.82□□□□□ -0.36
ACTN1-201ENST00000193403 VPS37DQ86XT2 251 aa12.82□□□□□ -0.36
ACTN1-201ENST00000193403 KAZALD1Q96I82 304 aa12.82□□□□□ -0.36
ACTN1-201ENST00000193403 SRRTQ9BXP5 876 aaKnown RBP12.82□□□□□ -0.36
ACTN1-201ENST00000193403 PLEKHA4Q9H4M7 779 aa12.82□□□□□ -0.36
ACTN1-201ENST00000193403 MYO5BQ9ULV0 1848 aa12.82□□□□□ -0.36
ACTN1-201ENST00000193403 EIF3JO75822 258 aaKnown RBP12.82□□□□□ -0.36
ACTN1-201ENST00000193403 LRRC24Q50LG9 513 aa12.82□□□□□ -0.36
ACTN1-201ENST00000193403 PI16Q6UXB8 463 aa12.82□□□□□ -0.36
ACTN1-201ENST00000193403 NBPF11Q86T75 865 aa12.82□□□□□ -0.36
ACTN1-201ENST00000193403 METTL22Q9BUU2 404 aaPredicted RBP12.82□□□□□ -0.36
ACTN1-201ENST00000193403 WDHD1O75717 1129 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-201ENST00000193403 PTPN12Q05209 780 aaKnown RBP12.81□□□□□ -0.36
ACTN1-201ENST00000193403 FILIP1LQ4L180 1135 aa12.81□□□□□ -0.36
ACTN1-201ENST00000193403 STAMQ92783 540 aa12.81□□□□□ -0.36
ACTN1-201ENST00000193403 DHX58Q96C10 678 aa12.81□□□□□ -0.36
ACTN1-201ENST00000193403 ZKSCAN3Q9BRR0 538 aa12.81□□□□□ -0.36
ACTN1-201ENST00000193403 RTEL1Q9NZ71 1219 aa12.81□□□□□ -0.36
ACTN1-201ENST00000193403 PCDHA5Q9Y5H7 936 aa12.81□□□□□ -0.36
ACTN1-201ENST00000193403 USP42Q9H9J4 1324 aaKnown RBP12.81□□□□□ -0.36
ACTN1-201ENST00000193403 RAD51AP2Q09MP3 1159 aa12.81□□□□□ -0.36
ACTN1-201ENST00000193403 CMTR1Q8N1G2 835 aaKnown RBP12.81□□□□□ -0.36
ACTN1-201ENST00000193403 FBXO18Q8NFZ0 1043 aa12.81□□□□□ -0.36
ACTN1-201ENST00000193403 WDR24Q96S15 920 aa12.81□□□□□ -0.36
ACTN1-201ENST00000193403 B4E1Z4 1266 aa12.81□□□□□ -0.36
ACTN1-201ENST00000193403 PLA2G4AP47712 749 aa12.81□□□□□ -0.36
ACTN1-201ENST00000193403 DHX8Q14562 1220 aaKnown RBP12.81□□□□□ -0.36
ACTN1-201ENST00000193403 TSR1Q2NL82 804 aaKnown RBP12.81□□□□□ -0.36
ACTN1-201ENST00000193403 NOM1Q5C9Z4 860 aaKnown RBP12.81□□□□□ -0.36
ACTN1-201ENST00000193403 KRT40Q6A162 431 aa12.81□□□□□ -0.36
ACTN1-201ENST00000193403 HELBQ8NG08 1087 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-201ENST00000193403 HAUS7Q99871 368 aa12.81□□□□□ -0.36
ACTN1-201ENST00000193403 OSBPL5Q9H0X9 879 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-201ENST00000193403 RASSF4Q9H2L5 321 aa12.81□□□□□ -0.36
ACTN1-201ENST00000193403 ABCF2Q9UG63 623 aa12.81□□□□□ -0.36
ACTN1-201ENST00000193403 KCNH3Q9ULD8 1083 aa12.81□□□□□ -0.36
ACTN1-201ENST00000193403 PLEKHG1Q9ULL1 1385 aa12.81□□□□□ -0.36
ACTN1-201ENST00000193403 RIMS1Q86UR5 1692 aaKnown RBP12.81□□□□□ -0.36
ACTN1-201ENST00000193403 IFIT3O14879 490 aaKnown RBP12.8□□□□□ -0.36
ACTN1-201ENST00000193403 POLR2DO15514 142 aaKnown RBP12.8□□□□□ -0.36
ACTN1-201ENST00000193403 ARHGAP6O43182 974 aa12.8□□□□□ -0.36
ACTN1-201ENST00000193403 CCT6AP40227 531 aaKnown RBP12.8□□□□□ -0.36
ACTN1-201ENST00000193403 CHMP4BP1P59074 171 aa12.8□□□□□ -0.36
ACTN1-201ENST00000193403 TMEM67Q5HYA8 995 aa12.8□□□□□ -0.36
ACTN1-201ENST00000193403 PARD6BQ9BYG5 372 aa12.8□□□□□ -0.36
ACTN1-201ENST00000193403 FHOD1Q9Y613 1164 aa12.8□□□□□ -0.36
ACTN1-201ENST00000193403 MAST3O60307 1309 aa12.8□□□□□ -0.36
ACTN1-201ENST00000193403 ZNF609O15014 1411 aa12.8□□□□□ -0.36
ACTN1-201ENST00000193403 CDKL5O76039 1030 aa12.8□□□□□ -0.36
ACTN1-201ENST00000193403 BRAPQ7Z569 592 aa12.8□□□□□ -0.36
ACTN1-201ENST00000193403 KCNH5Q8NCM2 988 aa12.8□□□□□ -0.36
ACTN1-201ENST00000193403 PDE11AQ9HCR9 933 aa12.8□□□□□ -0.36
ACTN1-201ENST00000193403 PREX1Q8TCU6 1659 aa12.8□□□□□ -0.36
ACTN1-201ENST00000193403 DLC1Q96QB1 1528 aa12.8□□□□□ -0.36
ACTN1-201ENST00000193403 EFCAB8A8MWE9 144 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms