RNA–Protein interactions for RNA: ENSMUST00000152655.8

Pcdh15-227, Transcript of Protocadherin-15, mousemouse

TSL 1 (best) BASIC

Gene Pcdh15, Length 3,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15-227ENSMUST00000152655 Cnnm2Q3TWN3 875 aa8.52□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Ddx19aQ61655 478 aaKnown RBP8.52□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Znf287Q9EQB9 759 aa8.52□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Sel1lQ9Z2G6 790 aa8.52□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Kiaa0232Q80U59 1396 aaKnown RBP8.52□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Zscan20B2KFW1 1030 aa8.52□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Cfap70D3YVL2 1141 aa8.52□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Gm21969J3QJZ1 289 aa8.52□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Tom1l2Q5SRX1 507 aa8.52□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Bms1Q6PGF5 1284 aaKnown RBP8.52□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Tekt3Q6X6Z7 490 aa8.52□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Ankrd13aQ80UP5 588 aa8.52□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Ift74Q8BKE9 600 aa8.52□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 4931408C20RikE9PWP9 1381 aa8.52□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Ssc5dQ8BV57 1371 aa8.52□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Metap2O08663 478 aaKnown RBP8.52□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Tpd52l1O54818 204 aa8.52□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Tpm2P58774 284 aa8.52□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Cnnm3Q32NY4 713 aa8.52□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Cdkl5Q3UTQ8 938 aa8.52□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Ddrgk1Q80WW9 315 aa8.52□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Rps6kb1Q8BSK8 525 aa8.52□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Mb21d2Q8C525 428 aa8.52□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Ccdc178Q8CDV0 866 aa8.52□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Ppil4Q9CXG3 492 aaKnown RBP8.52□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Usp21Q9QZL6 566 aa8.52□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 IkQ9Z1M8 557 aaKnown RBP8.52□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Limch1Q3UH68 1057 aa8.51□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 DlatQ8BMF4 642 aa8.51□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Srek1Q8BZX4 494 aaKnown RBP8.51□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 ZwintQ9CQU5 252 aa8.51□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Cxcl11Q9JHH5 100 aa8.51□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Syt1P46096 421 aa8.51□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Usp5P56399 858 aaKnown RBP8.51□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Utp18Q5SSI6 552 aaKnown RBP8.51□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Sgsm2Q80U12 1005 aa8.51□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Tmem179Q8BHH9 233 aa8.51□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 HdlbpQ8VDJ3 1268 aaKnown RBP8.51□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Bicd2Q921C5 820 aa8.51□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Lgr5Q9Z1P4 907 aa8.51□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Cyp2c69E9PXC3 491 aa8.51□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Cyp2c40P56657 491 aa8.51□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Mxd3Q80US8 206 aa8.51□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 9230110C19RikQ8CC70 267 aa8.51□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Kcnq3Q8K3F6 873 aa8.51□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Lonrf3Q9D4H7 753 aa8.51□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Gtf2f1Q3THK3 508 aaKnown RBP8.5□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Ccdc51Q3URS9 406 aa8.5□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Isy1Q69ZQ2 285 aaKnown RBP8.5□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Nme8Q715T0 586 aa8.5□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Dlg5E9Q9R9 1921 aa8.5□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Krt24A1L317 512 aa8.5□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Eif6O55135 245 aa8.5□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Tsr2Q8C8T8 191 aa8.5□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Pcdhb22Q91XZ8 794 aa8.5□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Plagl1Q9JLQ4 704 aa8.5□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Magea6O89010 325 aa8.5□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Lmnb1P14733 588 aaKnown RBP8.5□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 VrtnQ3SYK4 740 aa8.5□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Prpf38aQ4FK66 312 aaKnown RBP8.5□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 AsnsQ61024 561 aa8.5□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Acap3Q6NXL5 833 aa8.5□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Magea3Q6T340 320 aa8.5□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Ppp1r10Q80W00 888 aaKnown RBP8.5□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Map10Q8BJS7 891 aa8.5□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Kdm4aQ8BW72 1064 aa8.5□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Clip2Q9Z0H8 1047 aa8.5□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Tbc1d2bQ3U0J8 965 aa8.49□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Gpr162Q3UN16 588 aa8.49□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Eme2Q56A04 373 aa8.49□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Krt82Q99M74 516 aa8.49□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Rufy3Q9D394 469 aa8.49□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Galntl5Q9D4M9 431 aa8.49□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Tiam2Q6ZPF3 1715 aa8.49□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Traf3ip1Q149C2 625 aa8.49□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Nom1Q3UFM5 854 aaKnown RBP8.49□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Mknk2Q8CDB0 459 aa8.49□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Gdpd2Q9ESM6 539 aa8.49□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Sh3bgrQ9WUZ7 214 aa8.49□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Plekhg2Q6KAU7 1340 aa8.49□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Lbhd1A0A087WPA0 259 aa8.49□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Dhx8A2A4P0 1244 aaKnown RBP8.49□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Glt1d1A4FUP9 346 aa8.49□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Hirip3Q8BLH7 601 aa8.49□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Mtfr1lQ9CWE0 289 aa8.49□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Pik3ap1Q9EQ32 811 aa8.49□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Efcc1Q9JJF6 558 aa8.49□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Stx6Q9JKK1 255 aa8.49□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Cdc45Q9Z1X9 566 aa8.49□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Prr16A3KMN5 304 aa8.48□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Ccdc6D3YZP9 469 aa8.48□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Slc27a3O88561 667 aa8.48□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Plekhf1Q3TB82 279 aa8.48□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Ccdc66Q6NS45 935 aa8.48□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 U2af1l4Q8BGJ9 220 aa8.48□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Triml1Q8BVP1 470 aa8.48□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Ces1dQ8VCT4 565 aa8.48□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Nhsl1Q8CAF4 1587 aa8.48□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Pde11aP0C1Q2 933 aa8.48□□□□□ -1.05
Pcdh15-227ENSMUST00000152655 Krt40Q6IFX3 439 aa8.48□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 41.8 ms