RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Ccdc158Q8CDI6 1109 aa25.15■■□□□ 1.62
Ccdc88a-202ENSMUST00000109477 NsmfQ99NF2 532 aa25.15■■□□□ 1.62
Ccdc88a-202ENSMUST00000109477 RarsQ9D0I9 660 aaKnown RBP25.15■■□□□ 1.62
Ccdc88a-202ENSMUST00000109477 Cxcl11Q9JHH5 100 aa25.15■■□□□ 1.62
Ccdc88a-202ENSMUST00000109477 Flt1P35969 1333 aa25.14■■□□□ 1.62
Ccdc88a-202ENSMUST00000109477 Gnat2P50149 354 aa25.14■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Pkp1P97350 728 aaKnown RBP25.14■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Kif22Q3V300 660 aa25.14■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Tbc1d8Q9Z1A9 1134 aa25.14■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Nrxn2E9Q7X7 1710 aa25.14■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Csrnp1P59054 583 aa25.13■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Pof1bQ8K4L4 587 aa25.13■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Vsig10D3YX43 558 aa25.12■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Hand2Q61039 217 aa25.12■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 F2rP30558 430 aa25.12■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Dpf2Q61103 391 aaKnown RBP25.12■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Htatsf1Q8BGC0 757 aa25.12■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Zkscan1Q8BGS3 561 aaKnown RBP25.12■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Skor1Q8BX46 964 aa25.12■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Tceanc2Q8R2M0 207 aa25.12■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Trmt44Q9D2Q2 713 aa25.12■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 CpdO89001 1377 aa25.11■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 SfswapQ3USH5 945 aaKnown RBP25.11■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Atad2Q8CDM1 1040 aa25.11■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Pde3aQ9Z0X4 1141 aa25.11■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Slc4a4O88343 1079 aa25.1■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Kcnq3Q8K3F6 873 aa25.1■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Chd5A2A8L1 1946 aa25.1■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 NapbP28663 298 aa25.09■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Ercc3P49135 783 aa25.09■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Gm21985Q6P6P5 1106 aa25.09■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Plekhg6Q8R0J1 787 aa25.09■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Rbm43Q99J64 343 aa25.09■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Elmsan1E9Q2I4 1089 aaKnown RBP25.09■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Cyp2c68K7N6C2 491 aa25.09■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Znf326O88291 580 aa25.09■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Syt1P46096 421 aa25.09■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Tmem179Q8BHH9 233 aa25.09■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Shisa4Q8CA71 197 aa25.09■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Ces1dQ8VCT4 565 aa25.09■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Sgip1Q8VD37 806 aa25.09■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Mrpl50Q8VDT9 159 aaKnown RBP25.09■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Tubb6Q922F4 447 aa25.09■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Pold4Q9CWP8 107 aa25.09■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Col20a1Q923P0 1320 aa25.09■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 ErmnQ5EBJ4 281 aa25.08■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Dmrtc1Q9D9R7 182 aa25.08■■□□□ 1.61
Ccdc88a-202ENSMUST00000109477 Cnot6lQ8VEG6 555 aa25.07■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Agtpbp1Q641K1 1218 aa25.06■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 St18Q80TY4 1045 aa25.06■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Pla2g12bQ99P27 195 aa25.06■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Stag1Q9D3E6 1258 aa25.06■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Aox3G3X982 1335 aa25.05■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Kcna3P16390 528 aa25.05■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Exosc10P56960 887 aaKnown RBP25.05■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Dynll1P63168 89 aa25.05■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Pald1P70261 859 aa25.04■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Map3k9Q3U1V8 1077 aa25.04■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Thrap3Q569Z6 951 aaKnown RBP25.04■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Ncaph2Q8BSP2 607 aa25.04■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Pcdhb22Q91XZ8 794 aa25.04■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Pnpla6Q3TRM4 1355 aa25.04■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Myh2G3UW82 1942 aa25.04■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Gm3893E9Q1I1 302 aa25.03■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Kif20aP97329 887 aa25.03■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Esyt2Q3TZZ7 845 aa25.03■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Cdcp1Q5U462 833 aa25.03■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Acap3Q6NXL5 833 aa25.03■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Tex2Q6ZPJ0 1128 aaKnown RBP25.03■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Gm29094F6Q785 221 aa25.03■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Gjd4Q8BSD4 364 aa25.03■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Uba5Q8VE47 403 aa25.03■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Slc44a4Q91VA1 707 aa25.03■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Adgra3Q7TT36 1310 aa25.02■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Dennd3A2RT67 1274 aa25.02■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Gpr162Q3UN16 588 aa25.02■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Vil1Q62468 827 aa25.02■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Eaf2Q91ZD6 262 aa25.02■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Krt84Q99M73 603 aa25.02■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Pes1Q9EQ61 584 aaKnown RBP25.02■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Rbm6S4R1W5 1118 aaKnown RBP25.02■■□□□ 1.6
Ccdc88a-202ENSMUST00000109477 Pet2A2AHY8 747 aa25.01■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Cyp3a59D3Z2W7 503 aa25.01■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Dhx16G3X8X0 1044 aaKnown RBP25.01■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Casp12O08736 419 aa25.01■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Ppp1r10Q80W00 888 aaKnown RBP25.01■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Zbtb43Q9DAI4 467 aa25.01■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Gdpd2Q9ESM6 539 aa25.01■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 NesQ6P5H2 1864 aaKnown RBP25.01■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Cyp2d34L7N463 504 aa25■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Terf1P70371 421 aa25■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 PtmsQ9D0J8 101 aaKnown RBP25■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Odf2lQ9D478 642 aa25■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 AfdnQ9QZQ1 1820 aaKnown RBP25■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 1700018B08RikQ9DA83 213 aa25■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Usp17lbE9Q9U0 468 aa24.99■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 XpcP51612 930 aa24.99■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Tmed8Q3UHI4 326 aa24.99■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Pms1Q8K119 917 aa24.99■■□□□ 1.59
Ccdc88a-202ENSMUST00000109477 Smc3Q9CW03 1217 aaKnown RBP24.99■■□□□ 1.59
Retrieved 100 of 22,080 RNA–protein pairs in 11.4 ms