RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 SCN7AQ01118 1682 aa13.78□□□□□ -0.2
CLN5-208ENST00000636183 RBFOX2O43251 390 aaKnown RBP eCLIP13.78□□□□□ -0.2
CLN5-208ENST00000636183 LYRM2Q9NU23 88 aaPredicted RBP13.78□□□□□ -0.2
CLN5-208ENST00000636183 TRAV40A0A0B4J280 105 aa13.77□□□□□ -0.2
CLN5-208ENST00000636183 MOSP00540 346 aa13.77□□□□□ -0.2
CLN5-208ENST00000636183 RPL35AP18077 110 aaKnown RBP13.77□□□□□ -0.2
CLN5-208ENST00000636183 CYB5R2Q6BCY4 276 aa13.77□□□□□ -0.2
CLN5-208ENST00000636183 TMEM238LA0A1B0GVL6 79 aa13.77□□□□□ -0.2
CLN5-208ENST00000636183 A6NJY4 79 aa13.77□□□□□ -0.2
CLN5-208ENST00000636183 CTSBP07858 339 aa13.77□□□□□ -0.2
CLN5-208ENST00000636183 HOXB1P14653 301 aaPredicted RBP13.77□□□□□ -0.2
CLN5-208ENST00000636183 MMP9P14780 707 aa13.77□□□□□ -0.2
CLN5-208ENST00000636183 FUT9Q9Y231 359 aa13.77□□□□□ -0.2
CLN5-208ENST00000636183 LYNX1G3V0Z9 82 aa13.77□□□□□ -0.21
CLN5-208ENST00000636183 DNAL4O96015 105 aa13.77□□□□□ -0.21
CLN5-208ENST00000636183 LYNX1P0DP58 116 aa13.77□□□□□ -0.21
CLN5-208ENST00000636183 SCARF2Q96GP6 870 aaPredicted RBP13.77□□□□□ -0.21
CLN5-208ENST00000636183 ALKBH7Q9BT30 221 aaPredicted RBP13.77□□□□□ -0.21
CLN5-208ENST00000636183 ZFP30Q9Y2G7 519 aa13.77□□□□□ -0.21
CLN5-208ENST00000636183 UNC13CQ8NB66 2214 aa13.77□□□□□ -0.21
CLN5-208ENST00000636183 STAG3L2P0CL84 134 aa13.77□□□□□ -0.21
CLN5-208ENST00000636183 CD24P25063 80 aa13.77□□□□□ -0.21
CLN5-208ENST00000636183 NUDT10Q8NFP7 164 aa13.77□□□□□ -0.21
CLN5-208ENST00000636183 NUDT11Q96G61 164 aa13.77□□□□□ -0.21
CLN5-208ENST00000636183 SNRNP200O75643 2136 aaKnown RBP13.77□□□□□ -0.21
CLN5-208ENST00000636183 NXT2Q9NPJ8 142 aaKnown RBP13.77□□□□□ -0.21
CLN5-208ENST00000636183 COMPP49747 757 aaPredicted RBP13.76□□□□□ -0.21
CLN5-208ENST00000636183 SCAND1P57086 179 aa13.76□□□□□ -0.21
CLN5-208ENST00000636183 KLHDC2Q9Y2U9 406 aa13.76□□□□□ -0.21
CLN5-208ENST00000636183 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.76□□□□□ -0.21
CLN5-208ENST00000636183 ERVK11-1P61568 191 aa13.76□□□□□ -0.21
CLN5-208ENST00000636183 EFNB1P98172 346 aa13.76□□□□□ -0.21
CLN5-208ENST00000636183 ZP4Q12836 540 aa13.76□□□□□ -0.21
CLN5-208ENST00000636183 FAM166AQ6J272 317 aa13.76□□□□□ -0.21
CLN5-208ENST00000636183 SRSF12Q8WXF0 261 aaKnown RBP13.76□□□□□ -0.21
CLN5-208ENST00000636183 LSM10Q969L4 123 aaKnown RBP13.76□□□□□ -0.21
CLN5-208ENST00000636183 DLK1P80370 383 aa13.76□□□□□ -0.21
CLN5-208ENST00000636183 DMKNQ6E0U4 476 aaPredicted RBP13.76□□□□□ -0.21
CLN5-208ENST00000636183 Q6ZT83 130 aa13.76□□□□□ -0.21
CLN5-208ENST00000636183 KIR2DL4Q99706 377 aa13.76□□□□□ -0.21
CLN5-208ENST00000636183 ZNF729A6NN14 1252 aaPredicted RBP13.76□□□□□ -0.21
CLN5-208ENST00000636183 LILRA1O75019 489 aa13.76□□□□□ -0.21
CLN5-208ENST00000636183 DPM3Q9P2X0 92 aa13.76□□□□□ -0.21
CLN5-208ENST00000636183 EFEMP2O95967 443 aa13.76□□□□□ -0.21
CLN5-208ENST00000636183 RFPL3SP0C7P2 107 aa13.76□□□□□ -0.21
CLN5-208ENST00000636183 DLL3Q9NYJ7 618 aa13.76□□□□□ -0.21
CLN5-208ENST00000636183 CDK2AP2O75956 126 aa13.75□□□□□ -0.21
CLN5-208ENST00000636183 TNFSF10P50591 281 aa13.75□□□□□ -0.21
CLN5-208ENST00000636183 MIC13Q5XKP0 118 aa13.75□□□□□ -0.21
CLN5-208ENST00000636183 MAP1LC3AQ9H492 121 aa13.75□□□□□ -0.21
CLN5-208ENST00000636183 HSF4Q9ULV5 492 aa13.75□□□□□ -0.21
CLN5-208ENST00000636183 MCM3APO60318 1980 aa13.75□□□□□ -0.21
CLN5-208ENST00000636183 OGG1O15527 345 aa13.75□□□□□ -0.21
CLN5-208ENST00000636183 SURF2Q15527 256 aaPredicted RBP13.75□□□□□ -0.21
CLN5-208ENST00000636183 WNT5BQ9H1J7 359 aa13.75□□□□□ -0.21
CLN5-208ENST00000636183 FOXA2Q9Y261 457 aaPredicted RBP13.75□□□□□ -0.21
CLN5-208ENST00000636183 TBL2Q9Y4P3 447 aaKnown RBP13.75□□□□□ -0.21
CLN5-208ENST00000636183 NHSL1Q5SYE7 1610 aa13.75□□□□□ -0.21
CLN5-208ENST00000636183 C17orf51A8MQB3 221 aa13.75□□□□□ -0.21
CLN5-208ENST00000636183 HSPB1P04792 205 aaKnown RBP13.75□□□□□ -0.21
CLN5-208ENST00000636183 DPPA3Q6W0C5 159 aa13.75□□□□□ -0.21
CLN5-208ENST00000636183 CTXND1A0A1B0GTU2 59 aa13.75□□□□□ -0.21
CLN5-208ENST00000636183 A8MWL6 223 aa13.75□□□□□ -0.21
CLN5-208ENST00000636183 CBLN4Q9NTU7 201 aa13.75□□□□□ -0.21
CLN5-208ENST00000636183 CRHP06850 196 aa13.75□□□□□ -0.21
CLN5-208ENST00000636183 SELENOTP62341 195 aa13.75□□□□□ -0.21
CLN5-208ENST00000636183 UNC119Q13432 240 aa13.75□□□□□ -0.21
CLN5-208ENST00000636183 LINC00527Q9UJ94 153 aa13.75□□□□□ -0.21
CLN5-208ENST00000636183 A0A0U1RQV5 110 aa13.74□□□□□ -0.21
CLN5-208ENST00000636183 SAA1P0DJI8 122 aaPredicted RBP13.74□□□□□ -0.21
CLN5-208ENST00000636183 DNLZQ5SXM8 178 aa13.74□□□□□ -0.21
CLN5-208ENST00000636183 CD300LDQ6UXZ3 194 aa13.74□□□□□ -0.21
CLN5-208ENST00000636183 SEMA5BQ9P283 1151 aa13.74□□□□□ -0.21
CLN5-208ENST00000636183 ZNF688P0C7X2 276 aa13.74□□□□□ -0.21
CLN5-208ENST00000636183 C1QTNF12Q5T7M4 302 aa13.74□□□□□ -0.21
CLN5-208ENST00000636183 TRGC1P0CF51 173 aa13.74□□□□□ -0.21
CLN5-208ENST00000636183 FGF9P31371 208 aaPredicted RBP13.74□□□□□ -0.21
CLN5-208ENST00000636183 ARPC1AQ92747 370 aa13.73□□□□□ -0.21
CLN5-208ENST00000636183 SCMH1Q96GD3 660 aa13.73□□□□□ -0.21
CLN5-208ENST00000636183 TP53RKQ96S44 253 aa13.73□□□□□ -0.21
CLN5-208ENST00000636183 M0R143 59 aa13.73□□□□□ -0.21
CLN5-208ENST00000636183 CGB3P0DN86 165 aa13.73□□□□□ -0.21
CLN5-208ENST00000636183 RCC1P18754 421 aaPredicted RBP13.73□□□□□ -0.21
CLN5-208ENST00000636183 CRYBA2P53672 197 aa13.73□□□□□ -0.21
CLN5-208ENST00000636183 UQCC3Q6UW78 93 aa13.73□□□□□ -0.21
CLN5-208ENST00000636183 PHYHIPLQ96FC7 376 aa13.73□□□□□ -0.21
CLN5-208ENST00000636183 RP1P56715 2156 aa13.73□□□□□ -0.21
CLN5-208ENST00000636183 NEU3Q9UQ49 428 aa13.73□□□□□ -0.21
CLN5-208ENST00000636183 SCN1AP35498 2009 aa13.73□□□□□ -0.21
CLN5-208ENST00000636183 IBA57Q5T440 356 aaKnown RBP13.73□□□□□ -0.21
CLN5-208ENST00000636183 GOLT1AQ6ZVE7 132 aa13.73□□□□□ -0.21
CLN5-208ENST00000636183 C10orf111Q8N326 155 aa13.73□□□□□ -0.21
CLN5-208ENST00000636183 COPS9Q8WXC6 57 aa13.73□□□□□ -0.21
CLN5-208ENST00000636183 SPSB2Q99619 263 aa13.73□□□□□ -0.21
CLN5-208ENST00000636183 CECR9P0C854 216 aa13.73□□□□□ -0.21
CLN5-208ENST00000636183 TBR1Q16650 682 aa13.73□□□□□ -0.21
CLN5-208ENST00000636183 NPIPB3Q92617 1050 aa13.73□□□□□ -0.21
CLN5-208ENST00000636183 MRPL13Q9BYD1 178 aaKnown RBP13.73□□□□□ -0.21
CLN5-208ENST00000636183 DNAJC4Q9NNZ3 241 aa13.73□□□□□ -0.21
CLN5-208ENST00000636183 MUC21A0A0G2JKD1 596 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms