RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 OR52E4Q8NGH9 312 aa0.37□□□□□ -2.35
SRP54-214ENST00000630962 DSCAMO60469 2012 aa0.37□□□□□ -2.35
SRP54-214ENST00000630962 WDR90Q96KV7 1748 aa0.36□□□□□ -2.35
SRP54-214ENST00000630962 SMARCA4P51532 1647 aa0.36□□□□□ -2.35
SRP54-214ENST00000630962 A0A087WUU8 490 aa0.36□□□□□ -2.35
SRP54-214ENST00000630962 CCR2P41597 374 aa0.36□□□□□ -2.35
SRP54-214ENST00000630962 DLX6P56179 175 aa0.36□□□□□ -2.35
SRP54-214ENST00000630962 H2BFSP57053 126 aa0.36□□□□□ -2.35
SRP54-214ENST00000630962 FKBP1AP62942 108 aaKnown RBP0.36□□□□□ -2.35
SRP54-214ENST00000630962 CDK10Q15131 360 aa0.36□□□□□ -2.35
SRP54-214ENST00000630962 RBM48Q5RL73 367 aaKnown RBP0.36□□□□□ -2.35
SRP54-214ENST00000630962 C9orf64Q5T6V5 341 aa0.36□□□□□ -2.35
SRP54-214ENST00000630962 LRRC34Q8IZ02 419 aa0.36□□□□□ -2.35
SRP54-214ENST00000630962 ZNF675Q8TD23 568 aa0.36□□□□□ -2.35
SRP54-214ENST00000630962 POLR3HQ9Y535 204 aaPredicted RBP0.36□□□□□ -2.35
SRP54-214ENST00000630962 ARFGEF3Q5TH69 2177 aa0.35□□□□□ -2.35
SRP54-214ENST00000630962 TRAV7A0A075B6U4 112 aa0.35□□□□□ -2.35
SRP54-214ENST00000630962 ORC5O43913 435 aa0.35□□□□□ -2.35
SRP54-214ENST00000630962 APOA1P02647 267 aa0.35□□□□□ -2.35
SRP54-214ENST00000630962 KCNJ3P48549 501 aa0.35□□□□□ -2.35
SRP54-214ENST00000630962 NDUFA5Q16718 116 aa0.35□□□□□ -2.35
SRP54-214ENST00000630962 FBXO48Q5FWF7 155 aa0.35□□□□□ -2.35
SRP54-214ENST00000630962 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.35□□□□□ -2.35
SRP54-214ENST00000630962 SPATA12Q7Z6I5 190 aa0.35□□□□□ -2.35
SRP54-214ENST00000630962 BAP18Q8IXM2 172 aa0.35□□□□□ -2.35
SRP54-214ENST00000630962 DYNAPQ8N1N2 210 aa0.35□□□□□ -2.35
SRP54-214ENST00000630962 OR5AK3PQ8NH89 298 aa0.35□□□□□ -2.35
SRP54-214ENST00000630962 LRRC45Q96CN5 670 aa0.35□□□□□ -2.35
SRP54-214ENST00000630962 TMEM56Q96MV1 263 aa0.35□□□□□ -2.35
SRP54-214ENST00000630962 CHD2O14647 1828 aaKnown RBP0.35□□□□□ -2.35
SRP54-214ENST00000630962 BAZ2BQ9UIF8 2168 aaKnown RBP0.35□□□□□ -2.35
SRP54-214ENST00000630962 A0A0D9SEW6 157 aa0.34□□□□□ -2.36
SRP54-214ENST00000630962 MEIS3P1A6NDR6 274 aa0.34□□□□□ -2.36
SRP54-214ENST00000630962 NDUFS8O00217 210 aa0.34□□□□□ -2.36
SRP54-214ENST00000630962 SULT1C2O00338 296 aa0.34□□□□□ -2.36
SRP54-214ENST00000630962 MRASO14807 208 aa0.34□□□□□ -2.36
SRP54-214ENST00000630962 CCL2P13500 99 aa0.34□□□□□ -2.36
SRP54-214ENST00000630962 SYCP1Q15431 976 aa0.34□□□□□ -2.36
SRP54-214ENST00000630962 LCN8Q6JVE9 175 aa0.34□□□□□ -2.36
SRP54-214ENST00000630962 ATP5L2Q7Z4Y8 100 aa0.34□□□□□ -2.36
SRP54-214ENST00000630962 ZNF439Q8NDP4 499 aa0.34□□□□□ -2.36
SRP54-214ENST00000630962 DYNC2LI1Q8TCX1 351 aa0.34□□□□□ -2.36
SRP54-214ENST00000630962 Q8WTZ3 238 aa0.34□□□□□ -2.36
SRP54-214ENST00000630962 C12orf43Q96C57 262 aaKnown RBP0.34□□□□□ -2.36
SRP54-214ENST00000630962 SFRP2Q96HF1 295 aa0.34□□□□□ -2.36
SRP54-214ENST00000630962 FAM210AQ96ND0 272 aa0.34□□□□□ -2.36
SRP54-214ENST00000630962 SERPINB11Q96P15 392 aa0.34□□□□□ -2.36
SRP54-214ENST00000630962 TMEM208Q9BTX3 173 aa0.34□□□□□ -2.36
SRP54-214ENST00000630962 CHST6Q9GZX3 395 aa0.34□□□□□ -2.36
SRP54-214ENST00000630962 XAGE1AQ9HD64 81 aa0.34□□□□□ -2.36
SRP54-214ENST00000630962 THSD7AQ9UPZ6 1657 aa0.33□□□□□ -2.36
SRP54-214ENST00000630962 HEATR5BQ9P2D3 2071 aa0.33□□□□□ -2.36
SRP54-214ENST00000630962 TRAV38-1A0A0B4J264 116 aa0.33□□□□□ -2.36
SRP54-214ENST00000630962 OR6C6A6NF89 314 aa0.33□□□□□ -2.36
SRP54-214ENST00000630962 OR51F1A6NGY5 319 aa0.33□□□□□ -2.36
SRP54-214ENST00000630962 NEMFO60524 1076 aa0.33□□□□□ -2.36
SRP54-214ENST00000630962 PVALBP20472 110 aaPredicted RBP0.33□□□□□ -2.36
SRP54-214ENST00000630962 F8A1P23610 371 aa0.33□□□□□ -2.36
SRP54-214ENST00000630962 ADORA1P30542 326 aa0.33□□□□□ -2.36
SRP54-214ENST00000630962 ETV1P50549 477 aa0.33□□□□□ -2.36
SRP54-214ENST00000630962 AQP4P55087 323 aa0.33□□□□□ -2.36
SRP54-214ENST00000630962 TMEM33P57088 247 aa0.33□□□□□ -2.36
SRP54-214ENST00000630962 CARD18P57730 90 aa0.33□□□□□ -2.36
SRP54-214ENST00000630962 TMEM267Q0VDI3 215 aaPredicted RBP0.33□□□□□ -2.36
SRP54-214ENST00000630962 EBPQ15125 230 aaKnown RBP0.33□□□□□ -2.36
SRP54-214ENST00000630962 C10orf55Q5SWW7 151 aa0.33□□□□□ -2.36
SRP54-214ENST00000630962 UMODL1-AS1Q8N2C9 162 aa0.33□□□□□ -2.36
SRP54-214ENST00000630962 STOML3Q8TAV4 291 aa0.33□□□□□ -2.36
SRP54-214ENST00000630962 LRRC39Q96DD0 335 aa0.33□□□□□ -2.36
SRP54-214ENST00000630962 METTL9Q9H1A3 318 aa0.33□□□□□ -2.36
SRP54-214ENST00000630962 TRABDQ9H4I3 376 aa0.33□□□□□ -2.36
SRP54-214ENST00000630962 MRM2Q9UI43 246 aaKnown RBP0.33□□□□□ -2.36
SRP54-214ENST00000630962 SCAF11Q99590 1463 aaKnown RBP0.33□□□□□ -2.36
SRP54-214ENST00000630962 FLT4P35916 1363 aa0.32□□□□□ -2.36
SRP54-214ENST00000630962 LRPPRCP42704 1394 aaKnown RBP0.32□□□□□ -2.36
SRP54-214ENST00000630962 GOLGA8QA0A0J9YX86 632 aa0.32□□□□□ -2.36
SRP54-214ENST00000630962 METTL15A6NJ78 407 aa0.32□□□□□ -2.36
SRP54-214ENST00000630962 TNFAIP8O95379 198 aa0.32□□□□□ -2.36
SRP54-214ENST00000630962 LGALS1P09382 135 aaKnown RBP0.32□□□□□ -2.36
SRP54-214ENST00000630962 LINC00614P0C842 121 aa0.32□□□□□ -2.36
SRP54-214ENST00000630962 KRTAP21-1Q3LI58 79 aa0.32□□□□□ -2.36
SRP54-214ENST00000630962 FAM173BQ6P4H8 233 aa0.32□□□□□ -2.36
SRP54-214ENST00000630962 KRTAP19-3Q7Z4W3 81 aa0.32□□□□□ -2.36
SRP54-214ENST00000630962 RPP25LQ8N5L8 163 aaKnown RBP0.32□□□□□ -2.36
SRP54-214ENST00000630962 LINC00526Q96FQ7 95 aa0.32□□□□□ -2.36
SRP54-214ENST00000630962 IMMP2LQ96T52 175 aa0.32□□□□□ -2.36
SRP54-214ENST00000630962 SERPINI1Q99574 410 aa0.32□□□□□ -2.36
SRP54-214ENST00000630962 PRRG3Q9BZD7 231 aa0.32□□□□□ -2.36
SRP54-214ENST00000630962 PARVAQ9NVD7 372 aa0.32□□□□□ -2.36
SRP54-214ENST00000630962 CPAMD8Q8IZJ3 1885 aa0.31□□□□□ -2.36
SRP54-214ENST00000630962 C9JCJ5 164 aa0.31□□□□□ -2.36
SRP54-214ENST00000630962 M0R381 172 aa0.31□□□□□ -2.36
SRP54-214ENST00000630962 SDCBPO00560 298 aaPredicted RBP0.31□□□□□ -2.36
SRP54-214ENST00000630962 HLA-DQB2P05538 268 aa0.31□□□□□ -2.36
SRP54-214ENST00000630962 IVLP07476 585 aa0.31□□□□□ -2.36
SRP54-214ENST00000630962 MSMBP08118 114 aa0.31□□□□□ -2.36
SRP54-214ENST00000630962 TRGC1P0CF51 173 aa0.31□□□□□ -2.36
SRP54-214ENST00000630962 STX3Q13277 289 aa0.31□□□□□ -2.36
SRP54-214ENST00000630962 MESTQ5EB52 335 aa0.31□□□□□ -2.36
SRP54-214ENST00000630962 TEX36Q5VZQ5 186 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms